LOC108259702 cDNA ORF clone, Ictalurus punctatus(channel catfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108259702
Entrez Gene ID	108259702
Full Name	probable global transcription activator SNF2L2
Gene Type	protein-coding
Organism	Ictalurus punctatus(channel catfish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017459400.1	XP_017314889.1	probable global transcription activator SNF2L2 isoform X1
XM_017459401.1	XP_017314890.1	probable global transcription activator SNF2L2 isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC108259702 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108259702 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc26232	XM_017459400.1 Latest version!	Ictalurus punctatus probable global transcription activator SNF2L2 (LOC108259702), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OIc26233	XM_017459401.1 Latest version!	Ictalurus punctatus probable global transcription activator SNF2L2 (LOC108259702), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108259702 ( XM_017459400.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> XP_017314889.1 Ictalurus punctatus probable global transcription activator SNF2L2 (LOC108259702), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OIc26232
Clone ID Related Accession (Same CDS sequence)	XM_017459400.1
Accession Version	XM_017459400.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 807bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-05
Organism	Ictalurus punctatus(channel catfish)
Product	probable global transcription activator SNF2L2 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030443.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGAGAC TGAGTGCACG CTGCAATGCT GGGTTGCTAA TTCTCTCGCC TGCAGACAAG 
CGGCAGCCTG GAGACCACAG CCAGTCTCAG GCTGTTCTAA AAGGAGCGTC TGAGGATATG 
GAGGAAGACA GCAGTTTGAA GAAACGAAAA AGTGACCACC AGGGCAACCA GGCCTCTGAA 
ACGGGGCAGG AGATTGTCGA GAAAGTAAAA AAACGACGCG GTCGACCCCC AGCTGAGAAA 
CTTCCACCAA ATCCCCCAAA ACTTACCAAG CAAATGAACA CTCTTGTTGA CATGGTCATT 
AACTACAAAG ACACGTTGGG CCGCCAGATC AGTAAAGGTT TTGTTCAGCT GCCATCTAGG 
AAAGAGGTAC CAGAATACTA CGAGCTTATT CGCAAGCCTG TGGACTTTCG GAGGATCAGG 
GAACGAGTAC GTAACCACAA ATACAGGTGC ATTGCAGACT TGGAGAAAGA TATATTACAG 
ATGTGCCACA ATGCTCAGAC TTACAACCTG GAGGGATCTC AGATCTTTGA GGATTCCATT 
GTGCTAAAGT CGGTCTTTGA GAGCGCAAGA CAACGGATAG TAGAAATCAA TCAAGAGGAC 
ACTGATGCTG TTGGAGGCAG CGAGGCAGTG TGTGGCAAGC ATTTAAACCT AGAAATAAAA 
TCAGAAGCAA CAAAAACAAA ATTTGACAAG AGTAGGGAGA GAAGCACCAC TGTTCCTGCT 
AATTCCAGTG CTAAAGTAAA GGGGATTTAC AGTGATGAGG ACAGCGCTGA AGACCAGGAG 
GACAACACAG GCTTGGAGGA TGGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017314889.1
CDS	269..1075
Translation	MKRLSARCNAGLLILSPADKRQPGDHSQSQAVLKGASEDMEEDSSLKKRKSDHQGNQASETGQEIVEKVKKRRGRPPAEKLPPNPPKLTKQMNTLVDMVINYKDTLGRQISKGFVQLPSRKEVPEYYELIRKPVDFRRIRERVRNHKYRCIADLEKDILQMCHNAQTYNLEGSQIFEDSIVLKSVFESARQRIVEINQEDTDAVGGSEAVCGKHLNLEIKSEATKTKFDKSRERSTTVPANSSAKVKGIYSDEDSAEDQEDNTGLEDG

Target ORF information:

RefSeq Version	XM_017459400.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus probable global transcription activator SNF2L2 (LOC108259702), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017459400.1

ORF Insert Sequence:

ATGAAGAGAC TGAGTGCACG CTGCAATGCT GGGTTGCTAA TTCTCTCGCC TGCAGACAAG 
CGGCAGCCTG GAGACCACAG CCAGTCTCAG GCTGTTCTAA AAGGAGCGTC TGAGGATATG 
GAGGAAGACA GCAGTTTGAA GAAACGAAAA AGTGACCACC AGGGCAACCA GGCCTCTGAA 
ACGGGGCAGG AGATTGTCGA GAAAGTAAAA AAACGACGCG GTCGACCCCC AGCTGAGAAA 
CTTCCACCAA ATCCCCCAAA ACTTACCAAG CAAATGAACA CTCTTGTTGA CATGGTCATT 
AACTACAAAG ACACGTTGGG CCGCCAGATC AGTAAAGGTT TTGTTCAGCT GCCATCTAGG 
AAAGAGGTAC CAGAATACTA CGAGCTTATT CGCAAGCCTG TGGACTTTCG GAGGATCAGG 
GAACGAGTAC GTAACCACAA ATACAGGTGC ATTGCAGACT TGGAGAAAGA TATATTACAG 
ATGTGCCACA ATGCTCAGAC TTACAACCTG GAGGGATCTC AGATCTTTGA GGATTCCATT 
GTGCTAAAGT CGGTCTTTGA GAGCGCAAGA CAACGGATAG TAGAAATCAA TCAAGAGGAC 
ACTGATGCTG TTGGAGGCAG CGAGGCAGTG TGTGGCAAGC ATTTAAACCT AGAAATAAAA 
TCAGAAGCAA CAAAAACAAA ATTTGACAAG AGTAGGGAGA GAAGCACCAC TGTTCCTGCT 
AATTCCAGTG CTAAAGTAAA GGGGATTTAC AGTGATGAGG ACAGCGCTGA AGACCAGGAG 
GACAACACAG GCTTGGAGGA TGGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC108259702 ( XM_017459401.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> XP_017314890.1 Ictalurus punctatus probable global transcription activator SNF2L2 (LOC108259702), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OIc26233
Clone ID Related Accession (Same CDS sequence)	XM_017459401.1
Accession Version	XM_017459401.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 690bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-05
Organism	Ictalurus punctatus(channel catfish)
Product	probable global transcription activator SNF2L2 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030443.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGGAAG ACAGCAGTTT GAAGAAACGA AAAAGTGACC ACCAGGGCAA CCAGGCCTCT 
GAAACGGGGC AGGAGATTGT CGAGAAAGTA AAAAAACGAC GCGGTCGACC CCCAGCTGAG 
AAACTTCCAC CAAATCCCCC AAAACTTACC AAGCAAATGA ACACTCTTGT TGACATGGTC 
ATTAACTACA AAGACACGTT GGGCCGCCAG ATCAGTAAAG GTTTTGTTCA GCTGCCATCT 
AGGAAAGAGG TACCAGAATA CTACGAGCTT ATTCGCAAGC CTGTGGACTT TCGGAGGATC 
AGGGAACGAG TACGTAACCA CAAATACAGG TGCATTGCAG ACTTGGAGAA AGATATATTA 
CAGATGTGCC ACAATGCTCA GACTTACAAC CTGGAGGGAT CTCAGATCTT TGAGGATTCC 
ATTGTGCTAA AGTCGGTCTT TGAGAGCGCA AGACAACGGA TAGTAGAAAT CAATCAAGAG 
GACACTGATG CTGTTGGAGG CAGCGAGGCA GTGTGTGGCA AGCATTTAAA CCTAGAAATA 
AAATCAGAAG CAACAAAAAC AAAATTTGAC AAGAGTAGGG AGAGAAGCAC CACTGTTCCT 
GCTAATTCCA GTGCTAAAGT AAAGGGGATT TACAGTGATG AGGACAGCGC TGAAGACCAG 
GAGGACAACA CAGGCTTGGA GGATGGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017314890.1
CDS	176..865
Translation	MEEDSSLKKRKSDHQGNQASETGQEIVEKVKKRRGRPPAEKLPPNPPKLTKQMNTLVDMVINYKDTLGRQISKGFVQLPSRKEVPEYYELIRKPVDFRRIRERVRNHKYRCIADLEKDILQMCHNAQTYNLEGSQIFEDSIVLKSVFESARQRIVEINQEDTDAVGGSEAVCGKHLNLEIKSEATKTKFDKSRERSTTVPANSSAKVKGIYSDEDSAEDQEDNTGLEDG

Target ORF information:

RefSeq Version	XM_017459401.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus probable global transcription activator SNF2L2 (LOC108259702), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017459401.1

ORF Insert Sequence:

ATGGAGGAAG ACAGCAGTTT GAAGAAACGA AAAAGTGACC ACCAGGGCAA CCAGGCCTCT 
GAAACGGGGC AGGAGATTGT CGAGAAAGTA AAAAAACGAC GCGGTCGACC CCCAGCTGAG 
AAACTTCCAC CAAATCCCCC AAAACTTACC AAGCAAATGA ACACTCTTGT TGACATGGTC 
ATTAACTACA AAGACACGTT GGGCCGCCAG ATCAGTAAAG GTTTTGTTCA GCTGCCATCT 
AGGAAAGAGG TACCAGAATA CTACGAGCTT ATTCGCAAGC CTGTGGACTT TCGGAGGATC 
AGGGAACGAG TACGTAACCA CAAATACAGG TGCATTGCAG ACTTGGAGAA AGATATATTA 
CAGATGTGCC ACAATGCTCA GACTTACAAC CTGGAGGGAT CTCAGATCTT TGAGGATTCC 
ATTGTGCTAA AGTCGGTCTT TGAGAGCGCA AGACAACGGA TAGTAGAAAT CAATCAAGAG 
GACACTGATG CTGTTGGAGG CAGCGAGGCA GTGTGTGGCA AGCATTTAAA CCTAGAAATA 
AAATCAGAAG CAACAAAAAC AAAATTTGAC AAGAGTAGGG AGAGAAGCAC CACTGTTCCT 
GCTAATTCCA GTGCTAAAGT AAAGGGGATT TACAGTGATG AGGACAGCGC TGAAGACCAG 
GAGGACAACA CAGGCTTGGA GGATGGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.