LOC100304977 cDNA ORF clone, Ictalurus punctatus(channel catfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100304977
Entrez Gene ID	100304977
Full Name	TIR-containing adaptor molecule
Gene Type	protein-coding
Organism	Ictalurus punctatus(channel catfish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001200225.1	NP_001187154.1	TIR-containing adaptor molecule

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Toll-like receptor 3 and TICAM genes in catfish: species-specific expression profiles following infection with Edwardsiella ictaluri.
Baoprasertkul P, Peatman E, Somridhivej B, Liu Z
Immunogenetics58(10)817-30(2006 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC100304977 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100304977 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc39227	NM_001200225.1 Latest version!	Ictalurus punctatus TIR-containing adaptor molecule (LOC100304977), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100304977 ( NM_001200225.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> NP_001187154.1 Ictalurus punctatus TIR-containing adaptor molecule (LOC100304977), mRNA.

Price & Availability↑

CloneID	OIc39227
Clone ID Related Accession (Same CDS sequence)	NM_001200225.1
Accession Version	NM_001200225.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1563bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-04
Organism	Ictalurus punctatus(channel catfish)
Product	TIR-containing adaptor molecule
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ423777.1. ##Evidence-Data-START## Transcript exon combination :: DQ423777.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00116755, SAMN00739092 [ECO:0000348] ##Evidence-Data-END##

ATGGCAGAAG AGACGGAACT GGTGGACGAG AAGAAGCCGA CAGAGCTCTG TGTGAACCGT 
AACACTGTGG TAAATAGCCC CTTAGAAAGA TCAATCTCTG GATCAAGAAG CACTGAGAAT 
ATCTCTGGAG AACACACAGC TGCTGAATGT CTGATTATGG GTGCCTCCTT ACAGCCACGC 
AGGGAAAGCA CTGAGGCATT CAAAGTTCAG AAAGAGCCAC CTAAACGAGA TGACAGCTAC 
CCATCTTCTC TTCGTTCCAC CTCCACTTCG TGCAGCTCCT ACAGCCTAGA AATCAGCGTA 
TCCACAGCCA CAACCAATAA CAGTAACAAA GAATCTAGAC CACTGCCTCT AAAGACACCG 
CCAGAGAGCA GAGATGGTCA GAACCATGAG GCCAAGCCTT CAAGTCCCCT GGTTGATCAT 
AAACCTTTTT ATTCCGTAAC AAAGTCTTAT AAATCTTCAG ATCCCACTCC ACTCCAAGAA 
AGGGCGCAGT TAGAAAAATT TAAGTTCCGT CAGTACCCAG ATAAGCATGA CACTTCTGAG 
ATTGTAACAC CCAAGAGCCC AAATATAGAA TCTGGATTGG AGAAGACATT TTTGTCCATC 
CCTAGTGGTG GTGGGAAGGT AGGAGCTCAA CCAGTGTCAA CAAGCAAGCC ACCTGAAGCA 
TCCTCTACTC AGGAAGTTGG AAAGCATGAC AGCTTTAGTA CAGAGAAGCA AGCCAGCCAG 
GAGGAAGAGG ACATGTTTTA TGCATTTGTA ATTCTGCATG CAGAGGAAGA CTCAGAAGAA 
GCTGTGAGAC TCAAGTCCAG GTTGGAGTCG ATCTCCTCAA CAATTGGAGC GACTTTTTCT 
GAGGACTTTG CAGTGCCCGG CCAGTCCACC TTCAGGAGTG TGGAGGACGC CATCGAGAAC 
TCTGCCTACG TCATGCTGCT GCTCACCCCA AACTTTAACA CTCACCTAAA TGAGACAAAT 
GCAGATTCTG CACTCATGAA CTCAATTGAA AAACCACACA AACACAACAC TGTAATCCCT 
CTGCTACCCC GGGCCAATGG TTTGACTCGT AACCAAATGC CCTTCATTTT GAGAACTAAA 
AACCCACTAG TTGAAACGAG GGACAGAGAC ACTTTTGAAA AGATGGCCAA AAAGGTCTTG 
GACTTGAGAA ACATACAAAG ACAGAAGTCA ATGTGGACAG AGGCACAACT AGTAAAGAAA 
CAACGGGAAA AACAGCAGTG GTTGCAGGAA AAGAAACGGT ACTGTAAGGA CTTTATTCAA 
GAGTCTCCAA GGGTCAGAGA GTTAGAGGAG CAAATACAGC AACTGAAAAT GCAACAGCAA 
CACCTGCAAC CTCCTTATGC TCAACAGACC AATTCACACC AAGGTTTTCC TGGAAGACCA 
CAGTCATCTG GCCCCATGCC TTTCCGAAGC CCAAGTCCAA TGCCTTCATA TTACAGTGGG 
AATATGTGGC CACAACTACC ATCCAACATC CACATCCAGA ATGCTAAGTG CATCATGATC 
GGGAATAACT CCACCATGAC TGTGGGAGGA GGTGTAGACT CTGGGGATGA AGATAATTTC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001187154.1
CDS	206..1768
Translation	MAEETELVDEKKPTELCVNRNTVVNSPLERSISGSRSTENISGEHTAAECLIMGASLQPRRESTEAFKVQKEPPKRDDSYPSSLRSTSTSCSSYSLEISVSTATTNNSNKESRPLPLKTPPESRDGQNHEAKPSSPLVDHKPFYSVTKSYKSSDPTPLQERAQLEKFKFRQYPDKHDTSEIVTPKSPNIESGLEKTFLSIPSGGGKVGAQPVSTSKPPEASSTQEVGKHDSFSTEKQASQEEEDMFYAFVILHAEEDSEEAVRLKSRLESISSTIGATFSEDFAVPGQSTFRSVEDAIENSAYVMLLLTPNFNTHLNETNADSALMNSIEKPHKHNTVIPLLPRANGLTRNQMPFILRTKNPLVETRDRDTFEKMAKKVLDLRNIQRQKSMWTEAQLVKKQREKQQWLQEKKRYCKDFIQESPRVRELEEQIQQLKMQQQHLQPPYAQQTNSHQGFPGRPQSSGPMPFRSPSPMPSYYSGNMWPQLPSNIHIQNAKCIMIGNNSTMTVGGGVDSGDEDNF

Target ORF information:

RefSeq Version	NM_001200225.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus TIR-containing adaptor molecule (LOC100304977), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001200225.1

ORF Insert Sequence:

ATGGCAGAAG AGACGGAACT GGTGGACGAG AAGAAGCCGA CAGAGCTCTG TGTGAACCGT 
AACACTGTGG TAAATAGCCC CTTAGAAAGA TCAATCTCTG GATCAAGAAG CACTGAGAAT 
ATCTCTGGAG AACACACAGC TGCTGAATGT CTGATTATGG GTGCCTCCTT ACAGCCACGC 
AGGGAAAGCA CTGAGGCATT CAAAGTTCAG AAAGAGCCAC CTAAACGAGA TGACAGCTAC 
CCATCTTCTC TTCGTTCCAC CTCCACTTCG TGCAGCTCCT ACAGCCTAGA AATCAGCGTA 
TCCACAGCCA CAACCAATAA CAGTAACAAA GAATCTAGAC CACTGCCTCT AAAGACACCG 
CCAGAGAGCA GAGATGGTCA GAACCATGAG GCCAAGCCTT CAAGTCCCCT GGTTGATCAT 
AAACCTTTTT ATTCCGTAAC AAAGTCTTAT AAATCTTCAG ATCCCACTCC ACTCCAAGAA 
AGGGCGCAGT TAGAAAAATT TAAGTTCCGT CAGTACCCAG ATAAGCATGA CACTTCTGAG 
ATTGTAACAC CCAAGAGCCC AAATATAGAA TCTGGATTGG AGAAGACATT TTTGTCCATC 
CCTAGTGGTG GTGGGAAGGT AGGAGCTCAA CCAGTGTCAA CAAGCAAGCC ACCTGAAGCA 
TCCTCTACTC AGGAAGTTGG AAAGCATGAC AGCTTTAGTA CAGAGAAGCA AGCCAGCCAG 
GAGGAAGAGG ACATGTTTTA TGCATTTGTA ATTCTGCATG CAGAGGAAGA CTCAGAAGAA 
GCTGTGAGAC TCAAGTCCAG GTTGGAGTCG ATCTCCTCAA CAATTGGAGC GACTTTTTCT 
GAGGACTTTG CAGTGCCCGG CCAGTCCACC TTCAGGAGTG TGGAGGACGC CATCGAGAAC 
TCTGCCTACG TCATGCTGCT GCTCACCCCA AACTTTAACA CTCACCTAAA TGAGACAAAT 
GCAGATTCTG CACTCATGAA CTCAATTGAA AAACCACACA AACACAACAC TGTAATCCCT 
CTGCTACCCC GGGCCAATGG TTTGACTCGT AACCAAATGC CCTTCATTTT GAGAACTAAA 
AACCCACTAG TTGAAACGAG GGACAGAGAC ACTTTTGAAA AGATGGCCAA AAAGGTCTTG 
GACTTGAGAA ACATACAAAG ACAGAAGTCA ATGTGGACAG AGGCACAACT AGTAAAGAAA 
CAACGGGAAA AACAGCAGTG GTTGCAGGAA AAGAAACGGT ACTGTAAGGA CTTTATTCAA 
GAGTCTCCAA GGGTCAGAGA GTTAGAGGAG CAAATACAGC AACTGAAAAT GCAACAGCAA 
CACCTGCAAC CTCCTTATGC TCAACAGACC AATTCACACC AAGGTTTTCC TGGAAGACCA 
CAGTCATCTG GCCCCATGCC TTTCCGAAGC CCAAGTCCAA TGCCTTCATA TTACAGTGGG 
AATATGTGGC CACAACTACC ATCCAACATC CACATCCAGA ATGCTAAGTG CATCATGATC 
GGGAATAACT CCACCATGAC TGTGGGAGGA GGTGTAGACT CTGGGGATGA AGATAATTTC 
TGA