LOC100200809 cDNA ORF clone, Hydra vulgaris

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100200809
Entrez Gene ID	100200809
Full Name	katanin p80 WD40 repeat-containing subunit B1-like
Gene Type	protein-coding
Organism	Hydra vulgaris

mRNA and Protein(s)

mRNA	Protein	Name
XM_012701505.1	XP_012556959.1	katanin p80 WD40 repeat-containing subunit B1-like

Pathways from BioSystems
Gene Ontology

The following LOC100200809 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100200809 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OHc14280	XM_012701505.1 Latest version!	Hydra vulgaris katanin p80 WD40 repeat-containing subunit B1-like (LOC100200809), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100200809 ( XM_012701505.1 ) cDNA ORF clone, Hydra vulgaris -> XP_012556959.1 Hydra vulgaris katanin p80 WD40 repeat-containing subunit B1-like (LOC100200809), mRNA.

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CloneID	OHc14280
Clone ID Related Accession (Same CDS sequence)	XM_012701505.1
Accession Version	XM_012701505.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2148bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-07
Organism	Hydra vulgaris
Product	katanin p80 WD40 repeat-containing subunit B1-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004168183.1) and transcript sequence (GAOL01020847.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Hydra vulgaris Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 674 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTCAAATC CAAAGAGATC ATGGAAGCTA CAGGAGTTTG TAGCTCACAG TGCAAATGTA 
ACATGTTTAG CTATGGGACC AGCCTCAGGA AGAGTGATGG TTACTGGTGG TGAAGATAAA 
AAAGTGAATA TGTGGGCTGT TGGAAAACCT AATGTTATTC TTAGTTTATC AGGCCATACT 
TCAACAGTTG AATGTGTTCA ATTTAATAAT TCTGAAGAAC TTGTTTGTGC TGGATCTCAG 
TCAGGCTCAC TTAAAATTTG GGACTTGGAA GCTGCAAAAA TTGTGCGCAC ACTCACCGGG 
CATAAAGCAA ACATTAAATG TTTGGATTTT CACCCGTATG GGGAATTTGT TGCTTCAGGA 
TCATTAGATA CTACAGTTCG TTTATGGGAT GTTCGTAGAA AAGGTTGTAT TGTCAGTTAC 
AAGGGTCATA CTAATGCAAT AAATCATTTG AAATTCAGTC CTGACGGGAG ATGGGTCATA 
TCAGCCGGTG AAGATGGAAT GGTCAAACTC TGGGATTTAA ATGCCGGAAA GCTACTAGCT 
GATTTTATTC TTCATGCTGG ACCTGTTAAC TGTGTTGAAT TTCACCCAAG AGAATTTCTA 
GTGGCTACTG GATCTTCTGA CAGAACTGTT AAGTTTTGGG ACTTGGAAAC ATTTGGTTTA 
GTTTCTTCTA CTGATGTGGA AGCTAGTGCT GTTAGAACTA TTTGTTTTCA TCCTGATGGA 
TCGTGCCTCT TCAGTGGAGG ACTTGATTCC CTTAGGGTTT ATGCATGGGA ACCAAGTTGT 
TGTTATGATG CTCAAACACT GGGATGGGGC AAGGTTGCAG GAATGGCTTT CTCCACCAAC 
CAACTGATTG GTGCATCTTT TCAATCTACT AATGTATCTG TTTGGGTTGC AAACATGCTG 
GATTTGGAAG AAATCATTTC TAGGAGTGCC ATGCAACCAC CTTTTGAAAA AATTGATGTT 
AAGGAAAAAG AACCTGTAAA ACATGTGGAG TCAGTGTTAG ATAAAAAACA AAGTCCCCAA 
CGAAAGTCAT TTAATACAAG ACCAAAAACA TCATCTACCA AACCAAAACC ATCAAAAGAC 
TCTCAAGTGC TTCCGGATGC TGTTGTGCAA AAAATTAATG ATCCCAATAT TAATTATGAA 
GCAGTTTTTA ATCCACTAAG TGCACTTAGT CGATCTCCAA AACTTAATAA AAAAAATGTT 
CAACCTTTTG CAGTACCAAA TGAAGATCCT CAATCATCAG GACAAGTAGA TTCTTCAATT 
AAGCCTTTAG AGAAGTTGCC ACCTCCAGTT AAGCAGTCAG CTCCTATGGT TGTTCCGGTA 
CAACTGCCTC CTAAACAACC TGTTTCTTAC ATGCCAATAA ATCGTCATCA AGCTTTAATT 
GAGCCATCTC AACAAACTTA CGTTGTTACA AATGCTGAAG CTTCAAATGC TCCATCTACT 
TATTATCCAC AGCAACTTCC TTCTAACGAC TATCCAATTC AGTACCAACA TCAACCACGT 
GTTTCTCAAC CTATACGAAA ACAGTCAGCT CAGCAAGGTC CAGCTTTAAT AAAAGAAATG 
GATAATTTGA ATTTGGATAA TTTTTCACAG GTTGAAGAAA GCAGTAAATT AATGAAAAAT 
GAAGAAGATA ATACATTGAG TATTCTTGAA CGAAATCATA CTTCTTTGTG TCAAATATTG 
CAAGCAAGGT TGCAGAACTT GATGCTTATT AGTAGGCTAT GGACAGATGG GGATATAAAG 
GCTGCTGTAG AAACTGCTGG AAGTATGGCT GATCAATCAG TTTTTGTTGA TTTAATGAAT 
GTCTTGGCAT TTAAGCAGTC ACTTTGGAAT TTAGATTTAT GTGGTGTCGT TTTACCTTTA 
ATAAAAAAAT TATTTTCAAG CAATTATGAA TGCTATATTC AAACAGCAAG CTCATCACTG 
AAACTTATAC TCAGTAATTT CTCACAACTA ATTAAGAGCA CATTGAGTAC TCCTCCAGGT 
GCTTTGGGTG TGGATCTTTC AAGAGAAGAA AGGTATAACA AATGCGACAA ATGCTATAAA 
CAACTTCTGC TCATTAAAAA TGTTGTTAGC GAAAGGACGA CTACATCTGG TCGCATAGGT 
GTAATATGTC GTGAGTTAAC GATTGCGTTG CGCATCATTG ATATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012556959.1
CDS	85..2232
Translation	MSNPKRSWKLQEFVAHSANVTCLAMGPASGRVMVTGGEDKKVNMWAVGKPNVILSLSGHTSTVECVQFNNSEELVCAGSQSGSLKIWDLEAAKIVRTLTGHKANIKCLDFHPYGEFVASGSLDTTVRLWDVRRKGCIVSYKGHTNAINHLKFSPDGRWVISAGEDGMVKLWDLNAGKLLADFILHAGPVNCVEFHPREFLVATGSSDRTVKFWDLETFGLVSSTDVEASAVRTICFHPDGSCLFSGGLDSLRVYAWEPSCCYDAQTLGWGKVAGMAFSTNQLIGASFQSTNVSVWVANMLDLEEIISRSAMQPPFEKIDVKEKEPVKHVESVLDKKQSPQRKSFNTRPKTSSTKPKPSKDSQVLPDAVVQKINDPNINYEAVFNPLSALSRSPKLNKKNVQPFAVPNEDPQSSGQVDSSIKPLEKLPPPVKQSAPMVVPVQLPPKQPVSYMPINRHQALIEPSQQTYVVTNAEASNAPSTYYPQQLPSNDYPIQYQHQPRVSQPIRKQSAQQGPALIKEMDNLNLDNFSQVEESSKLMKNEEDNTLSILERNHTSLCQILQARLQNLMLISRLWTDGDIKAAVETAGSMADQSVFVDLMNVLAFKQSLWNLDLCGVVLPLIKKLFSSNYECYIQTASSSLKLILSNFSQLIKSTLSTPPGALGVDLSREERYNKCDKCYKQLLLIKNVVSERTTTSGRIGVICRELTIALRIIDM

Target ORF information:

RefSeq Version	XM_012701505.1
Organism	Hydra vulgaris
Definition	Hydra vulgaris katanin p80 WD40 repeat-containing subunit B1-like (LOC100200809), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012701505.1

ORF Insert Sequence:

ATGTCAAATC CAAAGAGATC ATGGAAGCTA CAGGAGTTTG TAGCTCACAG TGCAAATGTA 
ACATGTTTAG CTATGGGACC AGCCTCAGGA AGAGTGATGG TTACTGGTGG TGAAGATAAA 
AAAGTGAATA TGTGGGCTGT TGGAAAACCT AATGTTATTC TTAGTTTATC AGGCCATACT 
TCAACAGTTG AATGTGTTCA ATTTAATAAT TCTGAAGAAC TTGTTTGTGC TGGATCTCAG 
TCAGGCTCAC TTAAAATTTG GGACTTGGAA GCTGCAAAAA TTGTGCGCAC ACTCACCGGG 
CATAAAGCAA ACATTAAATG TTTGGATTTT CACCCGTATG GGGAATTTGT TGCTTCAGGA 
TCATTAGATA CTACAGTTCG TTTATGGGAT GTTCGTAGAA AAGGTTGTAT TGTCAGTTAC 
AAGGGTCATA CTAATGCAAT AAATCATTTG AAATTCAGTC CTGACGGGAG ATGGGTCATA 
TCAGCCGGTG AAGATGGAAT GGTCAAACTC TGGGATTTAA ATGCCGGAAA GCTACTAGCT 
GATTTTATTC TTCATGCTGG ACCTGTTAAC TGTGTTGAAT TTCACCCAAG AGAATTTCTA 
GTGGCTACTG GATCTTCTGA CAGAACTGTT AAGTTTTGGG ACTTGGAAAC ATTTGGTTTA 
GTTTCTTCTA CTGATGTGGA AGCTAGTGCT GTTAGAACTA TTTGTTTTCA TCCTGATGGA 
TCGTGCCTCT TCAGTGGAGG ACTTGATTCC CTTAGGGTTT ATGCATGGGA ACCAAGTTGT 
TGTTATGATG CTCAAACACT GGGATGGGGC AAGGTTGCAG GAATGGCTTT CTCCACCAAC 
CAACTGATTG GTGCATCTTT TCAATCTACT AATGTATCTG TTTGGGTTGC AAACATGCTG 
GATTTGGAAG AAATCATTTC TAGGAGTGCC ATGCAACCAC CTTTTGAAAA AATTGATGTT 
AAGGAAAAAG AACCTGTAAA ACATGTGGAG TCAGTGTTAG ATAAAAAACA AAGTCCCCAA 
CGAAAGTCAT TTAATACAAG ACCAAAAACA TCATCTACCA AACCAAAACC ATCAAAAGAC 
TCTCAAGTGC TTCCGGATGC TGTTGTGCAA AAAATTAATG ATCCCAATAT TAATTATGAA 
GCAGTTTTTA ATCCACTAAG TGCACTTAGT CGATCTCCAA AACTTAATAA AAAAAATGTT 
CAACCTTTTG CAGTACCAAA TGAAGATCCT CAATCATCAG GACAAGTAGA TTCTTCAATT 
AAGCCTTTAG AGAAGTTGCC ACCTCCAGTT AAGCAGTCAG CTCCTATGGT TGTTCCGGTA 
CAACTGCCTC CTAAACAACC TGTTTCTTAC ATGCCAATAA ATCGTCATCA AGCTTTAATT 
GAGCCATCTC AACAAACTTA CGTTGTTACA AATGCTGAAG CTTCAAATGC TCCATCTACT 
TATTATCCAC AGCAACTTCC TTCTAACGAC TATCCAATTC AGTACCAACA TCAACCACGT 
GTTTCTCAAC CTATACGAAA ACAGTCAGCT CAGCAAGGTC CAGCTTTAAT AAAAGAAATG 
GATAATTTGA ATTTGGATAA TTTTTCACAG GTTGAAGAAA GCAGTAAATT AATGAAAAAT 
GAAGAAGATA ATACATTGAG TATTCTTGAA CGAAATCATA CTTCTTTGTG TCAAATATTG 
CAAGCAAGGT TGCAGAACTT GATGCTTATT AGTAGGCTAT GGACAGATGG GGATATAAAG 
GCTGCTGTAG AAACTGCTGG AAGTATGGCT GATCAATCAG TTTTTGTTGA TTTAATGAAT 
GTCTTGGCAT TTAAGCAGTC ACTTTGGAAT TTAGATTTAT GTGGTGTCGT TTTACCTTTA 
ATAAAAAAAT TATTTTCAAG CAATTATGAA TGCTATATTC AAACAGCAAG CTCATCACTG 
AAACTTATAC TCAGTAATTT CTCACAACTA ATTAAGAGCA CATTGAGTAC TCCTCCAGGT 
GCTTTGGGTG TGGATCTTTC AAGAGAAGAA AGGTATAACA AATGCGACAA ATGCTATAAA 
CAACTTCTGC TCATTAAAAA TGTTGTTAGC GAAAGGACGA CTACATCTGG TCGCATAGGT 
GTAATATGTC GTGAGTTAAC GATTGCGTTG CGCATCATTG ATATGTGA