LOC110639604 cDNA ORF clone, Hevea brasiliensis(rubber tree)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC110639604
Entrez Gene ID	110639604
Full Name	peroxisome biogenesis protein 5-like
Gene Type	protein-coding
Organism	Hevea brasiliensis(rubber tree)

mRNA and Protein(s)

mRNA	Protein	Name
XM_021790623.1	XP_021646315.1	peroxisome biogenesis protein 5-like

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids.
Li D, Zeng R, Li Y, Zhao M, Chao J, Li Y, Wang K, Zhu L, Tian WM, Liang C
Scientific reports624984(2016 04)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC110639604 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110639604 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OHe138118	XM_021790623.1 Latest version!	Hevea brasiliensis peroxisome biogenesis protein 5-like (LOC110639604), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC110639604 ( XM_021790623.1 ) cDNA ORF clone, Hevea brasiliensis(rubber tree) -> XP_021646315.1 Hevea brasiliensis peroxisome biogenesis protein 5-like (LOC110639604), mRNA.

Price & Availability↑

CloneID	OHe138118
Clone ID Related Accession (Same CDS sequence)	XM_021790623.1
Accession Version	XM_021790623.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2250bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-18
Organism	Hevea brasiliensis(rubber tree)
Product	peroxisome biogenesis protein 5-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018746583.1) and transcript sequence (GDFU01045838.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Hevea brasiliensis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 321 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGCGATGC GGGACCTAGT TGCAGGAGGA GCGGCATGTG CGGTTCCGGG TTCTTCATCT 
TCCAATCCTC TTGGTGCTTT GGCCAATACT CTCCTAGGCT CTTCTTCTAA GACCCAGGAA 
AGGTTAAAGG AAATCCCTAT AGCGACTGCT ACAAGTTCTG AGAATCGTTT TTTCCAGGAT 
GTTGAGGACC CTTTGAGGGC ACTTCCAGGG GCTGAGTTTG AACAACAGCC ATTTCCTCGA 
CCCGGTGGTC AGGGTTCTGA ATTTCTTCGT GGGTTTCGCT CTGCGGATCA GAATGAGAAT 
GGACTTGCAG ATGCTTGGGA TGAGATACAG CGGTCTCATG TTCATCCTCC ACCTCAGGCT 
AACATTCCTC AATTGGATCA TGTGTATAAT CGTGGACCTC AGCTTCAACC AACTTTGGAT 
GGACCACCTC AAAGAGTGCT GTCAAACTTC TTGCACTCGT TTGTTGAAAG TAGCCGCGGT 
GCAATCCCTT TTCATCCTGC TCCACTGCCA TTGTTAGGAT TATCTGAAGG TGACAAACAA 
TGCATACGTG ATCGTAGCAG CATAATGGCT CGACACTTTT TTGCTGATAA AAGTGAAGAT 
TTCATTAATG CACAGGTGAA TGCCTTATTG TCTTCGTTAG ATATTGATAG TGATGTCCAC 
GTGAAGGGGC CTCTACCTGG GAGATTTCGA GAACTAGAGG ATTACTGGAA TGAATCACAA 
GGTAGTCTAA GACCAGGTCC TCATGCAGCT GATGGATGGA TTGCAGAATT TAACCAGCAT 
AGATTAGATC GTAGTGATCC TGATGCTTGG GCTCATGCAT TTGAACGACA GCACGGTGCT 
AATGGTTGGG CCTCAGAATT TGAGCAGGAA CAACAGTTGG CATCAATGGA TCAAATGAGA 
GGTGTGAATG TCCCAAACTT AGCAGCAATG GAACAGACTC GTATGCTTGC CCACACGCTT 
TCTCAAAATA ATGATCCTAA ATTTCAGAAT TCAAAGTTTC TTCAATTTGT GTCAAAGATG 
AGTCGTGGTG AACTTATTAT TGATGATAAT CAAGTCAAGC CAGCTGCTGG ACCTAGTGAT 
TGGGCAACAG AATATCAACA ACAGTATGCT AGGGGTACCT CTTGGGCTGA TGAATATGTG 
CGTGATGAGG TTTCTCGTGG ACCTGATCGA TGGGTGAATG AGTTTACCAC AGAAGCAGAG 
CAAAATGGGT CTGTTGATGA TCGGTGGGTG AATGAATTCT CAAAGTTGCA TGTTAATGAC 
TGGGTGGAAG AATTTGGGCA GCAGGTTGAG AAAGGAGAAC TGGGGGATAG TTCAGCTGAT 
AATTGGGCAA ATGCCTATGA TGAGTACCTA AATGAAAGAG TAGCTGCTAA GCGGCAGTCA 
GAAGCTTCAG GGGGAGACTA TGTGTTCTCT GGTATGAATC CTTATGTTGG TCACCCTAAT 
CCTTTAAAAG AAGGCCAGGA GCTATTCCGC AAAGGGCTTT TGAGTGAAGC AGTGCTTGCT 
TTAGAGGCTG AAGTCTTGAA AAACCCAGAT AATGCTGAAG GTTGGAGGTT ACTTGGAATA 
GCACATGCTG AGAACGATGA TGATCAACAG GCTATTGCAG CAATGATGCG TGCACAGGAG 
GCTGATCCCA CGAATCTCGA AGTGCTTCTT GCTCTTGGCG TGAGTCATAC AAATGAGTTG 
GAGCAGGCAG CTGCCTTGAA ATACCTGTAT GGATGGCTTC GTAATCATCC AAAGTATGGA 
ACACTTGCCA CTCCAGAGCT TGCTGATTCA TTATATTATG CTGATGTTGC TAGATTATTC 
AACGAAGCTT CTCAGATATC ACCTGAGGAT GCTGATGTGC ACATCGTACT TGGTGTCCTA 
TATAATTTAT CCAGGGAATA TGACAAAGCC ATTGCTTCCT TCCAGACGGC TTTGAAGCTC 
AAGCCACAGG ATTACTCCCT GTGGAACAAA CTTGGTGCGA CACAAGCCAA CAGTGTTCAG 
AGTGCTGATG CAATATTGGC TTATCAACAT GCACTTGATT TGAAGCCCAA CTATGTTCGA 
GCATGGGCAA ATATGGGAAT CAGTTATGCC AACCAGGGTA TGTACGAGGA ATCCATTCGC 
TACTATGTGA GGGCACTTGC TATGAATCCA AAGGCAGATA ATGCCTGGCA ATATTTGAGA 
ATTTCATTGA GCTGTGCTTC TAGGAATGAC ATGCTTGAAG TTTGCGATTC TCGGAATATA 
GACCTTCTGC AGAAGGAGTT TCCACTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021646315.1
CDS	348..2597
Translation	MAMRDLVAGGAACAVPGSSSSNPLGALANTLLGSSSKTQERLKEIPIATATSSENRFFQDVEDPLRALPGAEFEQQPFPRPGGQGSEFLRGFRSADQNENGLADAWDEIQRSHVHPPPQANIPQLDHVYNRGPQLQPTLDGPPQRVLSNFLHSFVESSRGAIPFHPAPLPLLGLSEGDKQCIRDRSSIMARHFFADKSEDFINAQVNALLSSLDIDSDVHVKGPLPGRFRELEDYWNESQGSLRPGPHAADGWIAEFNQHRLDRSDPDAWAHAFERQHGANGWASEFEQEQQLASMDQMRGVNVPNLAAMEQTRMLAHTLSQNNDPKFQNSKFLQFVSKMSRGELIIDDNQVKPAAGPSDWATEYQQQYARGTSWADEYVRDEVSRGPDRWVNEFTTEAEQNGSVDDRWVNEFSKLHVNDWVEEFGQQVEKGELGDSSADNWANAYDEYLNERVAAKRQSEASGGDYVFSGMNPYVGHPNPLKEGQELFRKGLLSEAVLALEAEVLKNPDNAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPTNLEVLLALGVSHTNELEQAAALKYLYGWLRNHPKYGTLATPELADSLYYADVARLFNEASQISPEDADVHIVLGVLYNLSREYDKAIASFQTALKLKPQDYSLWNKLGATQANSVQSADAILAYQHALDLKPNYVRAWANMGISYANQGMYEESIRYYVRALAMNPKADNAWQYLRISLSCASRNDMLEVCDSRNIDLLQKEFPL

Target ORF information:

RefSeq Version	XM_021790623.1
Organism	Hevea brasiliensis(rubber tree)
Definition	Hevea brasiliensis peroxisome biogenesis protein 5-like (LOC110639604), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021790623.1

ORF Insert Sequence:

ATGGCGATGC GGGACCTAGT TGCAGGAGGA GCGGCATGTG CGGTTCCGGG TTCTTCATCT 
TCCAATCCTC TTGGTGCTTT GGCCAATACT CTCCTAGGCT CTTCTTCTAA GACCCAGGAA 
AGGTTAAAGG AAATCCCTAT AGCGACTGCT ACAAGTTCTG AGAATCGTTT TTTCCAGGAT 
GTTGAGGACC CTTTGAGGGC ACTTCCAGGG GCTGAGTTTG AACAACAGCC ATTTCCTCGA 
CCCGGTGGTC AGGGTTCTGA ATTTCTTCGT GGGTTTCGCT CTGCGGATCA GAATGAGAAT 
GGACTTGCAG ATGCTTGGGA TGAGATACAG CGGTCTCATG TTCATCCTCC ACCTCAGGCT 
AACATTCCTC AATTGGATCA TGTGTATAAT CGTGGACCTC AGCTTCAACC AACTTTGGAT 
GGACCACCTC AAAGAGTGCT GTCAAACTTC TTGCACTCGT TTGTTGAAAG TAGCCGCGGT 
GCAATCCCTT TTCATCCTGC TCCACTGCCA TTGTTAGGAT TATCTGAAGG TGACAAACAA 
TGCATACGTG ATCGTAGCAG CATAATGGCT CGACACTTTT TTGCTGATAA AAGTGAAGAT 
TTCATTAATG CACAGGTGAA TGCCTTATTG TCTTCGTTAG ATATTGATAG TGATGTCCAC 
GTGAAGGGGC CTCTACCTGG GAGATTTCGA GAACTAGAGG ATTACTGGAA TGAATCACAA 
GGTAGTCTAA GACCAGGTCC TCATGCAGCT GATGGATGGA TTGCAGAATT TAACCAGCAT 
AGATTAGATC GTAGTGATCC TGATGCTTGG GCTCATGCAT TTGAACGACA GCACGGTGCT 
AATGGTTGGG CCTCAGAATT TGAGCAGGAA CAACAGTTGG CATCAATGGA TCAAATGAGA 
GGTGTGAATG TCCCAAACTT AGCAGCAATG GAACAGACTC GTATGCTTGC CCACACGCTT 
TCTCAAAATA ATGATCCTAA ATTTCAGAAT TCAAAGTTTC TTCAATTTGT GTCAAAGATG 
AGTCGTGGTG AACTTATTAT TGATGATAAT CAAGTCAAGC CAGCTGCTGG ACCTAGTGAT 
TGGGCAACAG AATATCAACA ACAGTATGCT AGGGGTACCT CTTGGGCTGA TGAATATGTG 
CGTGATGAGG TTTCTCGTGG ACCTGATCGA TGGGTGAATG AGTTTACCAC AGAAGCAGAG 
CAAAATGGGT CTGTTGATGA TCGGTGGGTG AATGAATTCT CAAAGTTGCA TGTTAATGAC 
TGGGTGGAAG AATTTGGGCA GCAGGTTGAG AAAGGAGAAC TGGGGGATAG TTCAGCTGAT 
AATTGGGCAA ATGCCTATGA TGAGTACCTA AATGAAAGAG TAGCTGCTAA GCGGCAGTCA 
GAAGCTTCAG GGGGAGACTA TGTGTTCTCT GGTATGAATC CTTATGTTGG TCACCCTAAT 
CCTTTAAAAG AAGGCCAGGA GCTATTCCGC AAAGGGCTTT TGAGTGAAGC AGTGCTTGCT 
TTAGAGGCTG AAGTCTTGAA AAACCCAGAT AATGCTGAAG GTTGGAGGTT ACTTGGAATA 
GCACATGCTG AGAACGATGA TGATCAACAG GCTATTGCAG CAATGATGCG TGCACAGGAG 
GCTGATCCCA CGAATCTCGA AGTGCTTCTT GCTCTTGGCG TGAGTCATAC AAATGAGTTG 
GAGCAGGCAG CTGCCTTGAA ATACCTGTAT GGATGGCTTC GTAATCATCC AAAGTATGGA 
ACACTTGCCA CTCCAGAGCT TGCTGATTCA TTATATTATG CTGATGTTGC TAGATTATTC 
AACGAAGCTT CTCAGATATC ACCTGAGGAT GCTGATGTGC ACATCGTACT TGGTGTCCTA 
TATAATTTAT CCAGGGAATA TGACAAAGCC ATTGCTTCCT TCCAGACGGC TTTGAAGCTC 
AAGCCACAGG ATTACTCCCT GTGGAACAAA CTTGGTGCGA CACAAGCCAA CAGTGTTCAG 
AGTGCTGATG CAATATTGGC TTATCAACAT GCACTTGATT TGAAGCCCAA CTATGTTCGA 
GCATGGGCAA ATATGGGAAT CAGTTATGCC AACCAGGGTA TGTACGAGGA ATCCATTCGC 
TACTATGTGA GGGCACTTGC TATGAATCCA AAGGCAGATA ATGCCTGGCA ATATTTGAGA 
ATTTCATTGA GCTGTGCTTC TAGGAATGAC ATGCTTGAAG TTTGCGATTC TCGGAATATA 
GACCTTCTGC AGAAGGAGTT TCCACTGTAA