OPN1LW cDNA ORF clone, Gallus gallus(chicken)

Gene
Clones
gRNAs

Summary

Gene Symbol	OPN1LW
Entrez Gene ID	396421
Full Name	opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan)
General protein information	Preferred Names opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) Names red-sensitive opsin iodopsin red cone photoreceptor pigment red-sensitive pigment
Gene Type	protein-coding
Organism	Gallus gallus(chicken)

mRNA and Protein(s)

mRNA	Protein	Name
XM_025146211.1	XP_025001979.1	red-sensitive opsin isoform X1
NM_205440.1	NP_990771.1	red-sensitive opsin

Pathways from BioSystems

Homologies

Bos taurus (cattle)	OPN1LW	NP_776991.1
Gallus gallus (chicken)	OPN1LW	NP_990771.1
Danio rerio (zebrafish)	opn1lw1	NP_571250.1
Pan troglodytes (chimpanzee)	OPN1LW	XP_003317827.1
Rattus norvegicus (Norway rat)	Opn1mw	NP_446000.1
Mus musculus (house mouse)	Opn1mw	NP_032132.1
Danio rerio (zebrafish)	opn1lw2	NP_001002443.1
Homo sapiens (human)	OPN1LW	NP_064445.2
Canis lupus familiaris (dog)	OPN1LW	NP_001184001.1
Xenopus tropicalis (tropical clawed frog)	opn1lw	NP_001096331.1

Gene Ontology
Bibliography

Related articles in PubMed

The molecular genetics and evolution of red and green color vision in vertebrates.
Yokoyama S, Radlwimmer FB
Genetics158(4)1697-710(2001 Aug)

Structure and regulation of the chicken GATA-3 gene.
Ishihara H, Engel JD, Yamamoto M
Journal of biochemistry117(3)499-508(1995 Mar)

Is chicken green-sensitive cone visual pigment a rhodopsin-like pigment? A comparative study of the molecular properties between chicken green and rhodopsin.
Shichida Y, Imai H, Imamoto Y, Fukada Y, Yoshizawa T
Biochemistry33(31)9040-4(1994 Aug)

Circular dichroism of metaiodopsin II and its binding to transducin: a comparative study between meta II intermediates of iodopsin and rhodopsin.
Okada T, Matsuda T, Kandori H, Fukada Y, Yoshizawa T, Shichida Y
Biochemistry33(16)4940-6(1994 Apr)

Activation of phosphodiesterase by chicken iodopsin.
Fukada Y, Yoshizawa T
FEBS letters149(1)117-22(1982 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following OPN1LW gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OPN1LW cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OGa27413	NM_205440.1 Latest version!	Gallus gallus opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) (OPN1LW), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OGa141759	XM_025146211.1 Latest version!	Gallus gallus opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) (OPN1LW), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

OPN1LW ( NM_205440.1 ) cDNA ORF clone, Gallus gallus(chicken) -> NP_990771.1 Gallus gallus opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) (OPN1LW), mRNA.

Price & Availability↑

CloneID	OGa27413
Clone ID Related Accession (Same CDS sequence)	NM_205440.1
Accession Version	NM_205440.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1089bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-23
Organism	Gallus gallus(chicken)
Product	red-sensitive opsin
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from M62903.1. ##Evidence-Data-START## Transcript exon combination :: M62903.1 [ECO:0000332] ##Evidence-Data-END##

ATGGCGGCGT GGGAGGCGGC GTTCGCCGCT CGGAGGCGGC ACGAAGAGGA GGACACCACG 
CGCGACAGCG TCTTCACCTA CACCAACAGC AACAACACCC GCGGACCATT TGAGGGCCCC 
AACTACCACA TAGCGCCGCG CTGGGTGTAC AACCTGACGT CGGTGTGGAT GATCTTCGTG 
GTGGCGGCGT CGGTGTTCAC CAACGGGTTG GTGCTCGTGG CCACCTGGAA GTTCAAGAAG 
CTGCGCCACC CCCTCAACTG GATCCTGGTG AACCTCGCCG TGGCCGACCT GGGCGAGACC 
GTCATCGCCT CCACCATCAG CGTCATCAAC CAGATCTCGG GGTACTTCAT CCTCGGGCAC 
CCCATGTGCG TCGTCGAGGG ATACACCGTG TCTGCATGCG GCATTACGGC GCTGTGGTCG 
CTGGCGATCA TTTCGTGGGA GCGGTGGTTC GTGGTGTGCA AACCGTTCGG GAACATCAAA 
TTCGACGGGA AGTTGGCGGT GGCGGGAATC CTCTTCTCCT GGCTGTGGTC CTGCGCGTGG 
ACCGCGCCGC CCATCTTCGG GTGGAGCCGG TATTGGCCCC ACGGCCTGAA GACGTCGTGC 
GGCCCGGATG TGTTCAGCGG CAGCTCCGAC CCGGGGGTGC AGTCCTACAT GGTGGTGCTG 
ATGGTCACGT GCTGCTTCTT CCCCCTCGCC ATCATCATCC TCTGCTACCT GCAAGTCTGG 
CTCGCCATCC GCGCCGTGGC GGCTCAGCAG AAGGAGTCGG AGTCGACGCA GAAGGCGGAG 
AAGGAGGTGT CCCGCATGGT GGTGGTGATG ATCGTGGCCT ACTGCTTCTG CTGGGGGCCC 
TACACCTTCT TCGCCTGCTT CGCCGCCGCC AACCCCGGCT ACGCCTTCCA CCCCCTGGCG 
GCCGCCCTGC CCGCCTACTT CGCCAAGTCG GCCACCATCT ACAACCCCAT CATCTACGTC 
TTCATGAACC GACAGTTCCG GAACTGCATC CTGCAGCTCT TCGGCAAAAA GGTGGACGAC 
GGCTCCGAGG TGTCCACGTC GCGCACGGAG GTCTCCTCCG TCTCCAACTC CTCCGTCTCG 
CCCGCCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_990771.1
CDS	9..1097
Translation	MAAWEAAFAARRRHEEEDTTRDSVFTYTNSNNTRGPFEGPNYHIAPRWVYNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIASTISVINQISGYFILGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGNIKFDGKLAVAGILFSWLWSCAWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAIRAVAAQQKESESTQKAEKEVSRMVVVMIVAYCFCWGPYTFFACFAAANPGYAFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDGSEVSTSRTEVSSVSNSSVSPA

Target ORF information:

RefSeq Version	NM_205440.1
Organism	Gallus gallus(chicken)
Definition	Gallus gallus opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) (OPN1LW), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_205440.1

ORF Insert Sequence:

ATGGCGGCGT GGGAGGCGGC GTTCGCCGCT CGGAGGCGGC ACGAAGAGGA GGACACCACG 
CGCGACAGCG TCTTCACCTA CACCAACAGC AACAACACCC GCGGACCATT TGAGGGCCCC 
AACTACCACA TAGCGCCGCG CTGGGTGTAC AACCTGACGT CGGTGTGGAT GATCTTCGTG 
GTGGCGGCGT CGGTGTTCAC CAACGGGTTG GTGCTCGTGG CCACCTGGAA GTTCAAGAAG 
CTGCGCCACC CCCTCAACTG GATCCTGGTG AACCTCGCCG TGGCCGACCT GGGCGAGACC 
GTCATCGCCT CCACCATCAG CGTCATCAAC CAGATCTCGG GGTACTTCAT CCTCGGGCAC 
CCCATGTGCG TCGTCGAGGG ATACACCGTG TCTGCATGCG GCATTACGGC GCTGTGGTCG 
CTGGCGATCA TTTCGTGGGA GCGGTGGTTC GTGGTGTGCA AACCGTTCGG GAACATCAAA 
TTCGACGGGA AGTTGGCGGT GGCGGGAATC CTCTTCTCCT GGCTGTGGTC CTGCGCGTGG 
ACCGCGCCGC CCATCTTCGG GTGGAGCCGG TATTGGCCCC ACGGCCTGAA GACGTCGTGC 
GGCCCGGATG TGTTCAGCGG CAGCTCCGAC CCGGGGGTGC AGTCCTACAT GGTGGTGCTG 
ATGGTCACGT GCTGCTTCTT CCCCCTCGCC ATCATCATCC TCTGCTACCT GCAAGTCTGG 
CTCGCCATCC GCGCCGTGGC GGCTCAGCAG AAGGAGTCGG AGTCGACGCA GAAGGCGGAG 
AAGGAGGTGT CCCGCATGGT GGTGGTGATG ATCGTGGCCT ACTGCTTCTG CTGGGGGCCC 
TACACCTTCT TCGCCTGCTT CGCCGCCGCC AACCCCGGCT ACGCCTTCCA CCCCCTGGCG 
GCCGCCCTGC CCGCCTACTT CGCCAAGTCG GCCACCATCT ACAACCCCAT CATCTACGTC 
TTCATGAACC GACAGTTCCG GAACTGCATC CTGCAGCTCT TCGGCAAAAA GGTGGACGAC 
GGCTCCGAGG TGTCCACGTC GCGCACGGAG GTCTCCTCCG TCTCCAACTC CTCCGTCTCG 
CCCGCCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

OPN1LW ( XM_025146211.1 ) cDNA ORF clone, Gallus gallus(chicken) -> XP_025001979.1 Gallus gallus opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) (OPN1LW), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OGa141759
Clone ID Related Accession (Same CDS sequence)	XM_025146211.1
Accession Version	XM_025146211.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1818bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-16
Organism	Gallus gallus(chicken)
Product	red-sensitive opsin isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020110160.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGGCGT GGGAGGCGGC GTTCGCCGCT CGGAGGCGGC ACGAAGAGGA GGACACCACG 
CGCGACAGCG TCTTCACCTA CACCAACAGC AACAACACCC GCGGACCATT TGAGGGCCCC 
AACTACCACA TAGCGCCGCG CTGGGTGTAC AACCTGACGT CGCTGTGGAT GATCTTCGTG 
GTGGCGGCGT CGGTGTTCAC CAACGGGTTG GTGCTCGTGG CCACCTGGAA GTTCAAGAAG 
CTGCGCCACC CCCTCAACTG GATCCTGGTG AACCTCGCCG TGGCCGACCT GGGCGAGACC 
GTCATCGCCT CCACCATCAG CGTCATCAAC CAGATCTCGG GGTACTTCAT CCTCGGGCAC 
CCCATGTGCG TCGTCGAGGG ATACACCGTG TCTGCATGCG GCATTACGGC GCTGTGGTCG 
CTGGCGATCA TTTCGTGGGA GCGGTGGTTC GTGGTGTGCA AACCGTTCGG GAACATCAAA 
TTCGACGGGA AGTTGGCGGT GGCGGGAATC CTCTTCTCCT GGCTGTGGTC CTGCGCGTGG 
ACCGCGCCGC CCATCTTCGG GTGGAGCCGG TATTGGCCCC ACGGCCTGAA GACGTCGTGC 
GGCCCGGATG TGTTCAGCGG CAGCTCCGAC CCGGGGGTGC AGTCCTACAT GGTGGTGCTG 
ATGGTCACGT GCTGCTTCTT CCCCCTCGCC ATCATCATCC TCTGCTACCT GCAAGTCTGG 
CTCGCCATCC GCGCCGTGGC GGCTCAGCAG AAGGAGTCGG AGTCGACGCA GAAGGCGGAG 
AAGGAGGTGT CCCGCATGGT GGTGGTGATG ATCGTGGCCT ACTGCTTCTG CTGGGGGCCC 
TACACCTTCT TCGCCTGCTT CGCCGCCGCC AACCCCGGCT ACGCCTTCCA CCCCCTGGCG 
GCCGCCCTGC CCGCCTACTT CGCCAAGTCG GCCACCATCT ACAACCCCAT CATCTACGTC 
TTCATGAACC GACAGGTGGG GATCCGGGGG GTCTCTGTTC CTTTAAGAGT CCCTCTGGGG 
CTCTCTGTCC CTTTAAGGGT CTCTCTAGGG CTCCCTGTCC CTGTAAGGGA GTGCCTATTG 
GGCTTTACGG GGGTCTCTGT CCCTTTAAGG GTCCCTCTGG GGCTCTCTGT CCCTGTAAGG 
GTCCCTCTGG GGCTCTCTAT CCCTGTAAGG GAGTGCCTAT TGGGCTTTAC AGGGCTCTCT 
GTCCCTTTAA GGGTCTCTCT AGGGCTCCCT GTCCCTGTAA GGGAGTGCCT ATTGGGCTTT 
ACGGGGGTCT CTGTCTCTTT AAGGGCCCCT CTGGGGCTCT CTATCCCTGT AAGGGAGTGC 
CTATTGGGCT TTACGGGGGT CCCTTTAAGG GTCCCTATGG GGGCTCTATG GGTCCCCTTC 
CACCCCCTGG CGGCCGCCCT GCCCACCTAC CTCACCAAGT CGGCCACCAT CTACAACTCC 
ATCATCTACG TCTTCATGAA CCGACAGGTG GGGATCCGGG GGGCTTCGGG GGGTCTCTGT 
CCCTTTAAGA GCCACTACGG GGCTCTCTGT CCCTGTAAGA GGGTGCCTAT TGGCTTTTAC 
GGGGGTCTCT GTCCCTTTAA GAGTCCCTAT AGGGCTCCCT GTCCCTGTAA GGGAGTGCCT 
ATTGGCTTTT ACGGGGCTCC CTGTCCCTGT AAGGGTCTCT CTGGGGCTCC CTGTCCCTGT 
AAGGGAGTGC CTATTGGGCT TTACGGGGGT CTCTGTCCCT GTAAGAGAGT GCCTATTGGG 
ATTTACAGGG GTCTCTGGCC CTTTAAGAGT CCCTCTGGGG CTCTCTGTCC CTGTAAGAGG 
GTGCCTATTG GCTTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_025001979.1
CDS	35..1852
Translation	MAAWEAAFAARRRHEEEDTTRDSVFTYTNSNNTRGPFEGPNYHIAPRWVYNLTSLWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIASTISVINQISGYFILGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGNIKFDGKLAVAGILFSWLWSCAWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAIRAVAAQQKESESTQKAEKEVSRMVVVMIVAYCFCWGPYTFFACFAAANPGYAFHPLAAALPAYFAKSATIYNPIIYVFMNRQVGIRGVSVPLRVPLGLSVPLRVSLGLPVPVRECLLGFTGVSVPLRVPLGLSVPVRVPLGLSIPVRECLLGFTGLSVPLRVSLGLPVPVRECLLGFTGVSVSLRAPLGLSIPVRECLLGFTGVPLRVPMGALWVPFHPLAAALPTYLTKSATIYNSIIYVFMNRQVGIRGASGGLCPFKSHYGALCPCKRVPIGFYGGLCPFKSPYRAPCPCKGVPIGFYGAPCPCKGLSGAPCPCKGVPIGLYGGLCPCKRVPIGIYRGLWPFKSPSGALCPCKRVPIGF

Target ORF information:

RefSeq Version	XM_025146211.1
Organism	Gallus gallus(chicken)
Definition	Gallus gallus opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) (OPN1LW), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_025146211.1

ORF Insert Sequence:

ATGGCGGCGT GGGAGGCGGC GTTCGCCGCT CGGAGGCGGC ACGAAGAGGA GGACACCACG 
CGCGACAGCG TCTTCACCTA CACCAACAGC AACAACACCC GCGGACCATT TGAGGGCCCC 
AACTACCACA TAGCGCCGCG CTGGGTGTAC AACCTGACGT CGCTGTGGAT GATCTTCGTG 
GTGGCGGCGT CGGTGTTCAC CAACGGGTTG GTGCTCGTGG CCACCTGGAA GTTCAAGAAG 
CTGCGCCACC CCCTCAACTG GATCCTGGTG AACCTCGCCG TGGCCGACCT GGGCGAGACC 
GTCATCGCCT CCACCATCAG CGTCATCAAC CAGATCTCGG GGTACTTCAT CCTCGGGCAC 
CCCATGTGCG TCGTCGAGGG ATACACCGTG TCTGCATGCG GCATTACGGC GCTGTGGTCG 
CTGGCGATCA TTTCGTGGGA GCGGTGGTTC GTGGTGTGCA AACCGTTCGG GAACATCAAA 
TTCGACGGGA AGTTGGCGGT GGCGGGAATC CTCTTCTCCT GGCTGTGGTC CTGCGCGTGG 
ACCGCGCCGC CCATCTTCGG GTGGAGCCGG TATTGGCCCC ACGGCCTGAA GACGTCGTGC 
GGCCCGGATG TGTTCAGCGG CAGCTCCGAC CCGGGGGTGC AGTCCTACAT GGTGGTGCTG 
ATGGTCACGT GCTGCTTCTT CCCCCTCGCC ATCATCATCC TCTGCTACCT GCAAGTCTGG 
CTCGCCATCC GCGCCGTGGC GGCTCAGCAG AAGGAGTCGG AGTCGACGCA GAAGGCGGAG 
AAGGAGGTGT CCCGCATGGT GGTGGTGATG ATCGTGGCCT ACTGCTTCTG CTGGGGGCCC 
TACACCTTCT TCGCCTGCTT CGCCGCCGCC AACCCCGGCT ACGCCTTCCA CCCCCTGGCG 
GCCGCCCTGC CCGCCTACTT CGCCAAGTCG GCCACCATCT ACAACCCCAT CATCTACGTC 
TTCATGAACC GACAGGTGGG GATCCGGGGG GTCTCTGTTC CTTTAAGAGT CCCTCTGGGG 
CTCTCTGTCC CTTTAAGGGT CTCTCTAGGG CTCCCTGTCC CTGTAAGGGA GTGCCTATTG 
GGCTTTACGG GGGTCTCTGT CCCTTTAAGG GTCCCTCTGG GGCTCTCTGT CCCTGTAAGG 
GTCCCTCTGG GGCTCTCTAT CCCTGTAAGG GAGTGCCTAT TGGGCTTTAC AGGGCTCTCT 
GTCCCTTTAA GGGTCTCTCT AGGGCTCCCT GTCCCTGTAA GGGAGTGCCT ATTGGGCTTT 
ACGGGGGTCT CTGTCTCTTT AAGGGCCCCT CTGGGGCTCT CTATCCCTGT AAGGGAGTGC 
CTATTGGGCT TTACGGGGGT CCCTTTAAGG GTCCCTATGG GGGCTCTATG GGTCCCCTTC 
CACCCCCTGG CGGCCGCCCT GCCCACCTAC CTCACCAAGT CGGCCACCAT CTACAACTCC 
ATCATCTACG TCTTCATGAA CCGACAGGTG GGGATCCGGG GGGCTTCGGG GGGTCTCTGT 
CCCTTTAAGA GCCACTACGG GGCTCTCTGT CCCTGTAAGA GGGTGCCTAT TGGCTTTTAC 
GGGGGTCTCT GTCCCTTTAA GAGTCCCTAT AGGGCTCCCT GTCCCTGTAA GGGAGTGCCT 
ATTGGCTTTT ACGGGGCTCC CTGTCCCTGT AAGGGTCTCT CTGGGGCTCC CTGTCCCTGT 
AAGGGAGTGC CTATTGGGCT TTACGGGGGT CTCTGTCCCT GTAAGAGAGT GCCTATTGGG 
ATTTACAGGG GTCTCTGGCC CTTTAAGAGT CCCTCTGGGG CTCTCTGTCC CTGTAAGAGG 
GTGCCTATTG GCTTTTAA