LOC105920016 cDNA ORF clone, Fundulus heteroclitus(mummichog)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105920016
Entrez Gene ID	105920016
Full Name	H-2 class I histocompatibility antigen, Q9 alpha chain
Gene Type	protein-coding
Organism	Fundulus heteroclitus(mummichog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012855507.1	XP_012710961.1	major histocompatibility complex class I-related gene protein-like
XM_012855507.2	XP_012710961.2	H-2 class I histocompatibility antigen, Q9 alpha chain

Pathways from BioSystems
Gene Ontology

The following LOC105920016 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105920016 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFu104491	XM_012855507.1 Latest version!	Fundulus heteroclitus major histocompatibility complex class I-related gene protein-like (LOC105920016), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OFu130121	XM_012855507.2 Latest version!	Fundulus heteroclitus H-2 class I histocompatibility antigen, Q9 alpha chain (LOC105920016), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105920016 ( XM_012855507.1 ) cDNA ORF clone, Fundulus heteroclitus(mummichog) -> XP_012710961.1 Fundulus heteroclitus major histocompatibility complex class I-related gene protein-like (LOC105920016), mRNA.

Price & Availability↑

CloneID	OFu104491
Clone ID Related Accession (Same CDS sequence)	XM_012855507.1
Accession Version	XM_012855507.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 723bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-14
Organism	Fundulus heteroclitus(Mummichog)
Product	major histocompatibility complex class I-related gene protein-like
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012224884.1) and transcript sequence (GAJO01000052.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Fundulus heteroclitus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 266 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGATTGGCG TTGAGTGGGA TGATGAGACA GACAAGATTA CTGGATTTAA TCAGTATGGT 
TATGATGGGG AAGACTTCCT TGCATTGAAC TTTGATACAA AGACATGGAT TGCTCCTGTT 
CAGCAAGCTG TCATCACCAA GCAGAAGTGG GACAAGACTA ATGTTGATTA CTTGATCAAT 
TATCATGCTG AGTATGCTCC AGAATGGTTG AAGAAGTATG TGAACTACGG AAAGAGCTCT 
CTGATGAGAA CAGAACTACC ATCAGTGTCT GTCCTCCGCA AGAGTTCCTC GTCTCCAGTC 
AGCTGCCACG CTACAGGTTT CTACCCCAAT GGAGCAGAGA TGTTGTGGAG GAAAGATGGA 
GAGGAGATTC ATGTCGGCGT GGAAAAAGGA GAGATCCTCC CTAACAATGA TGGGACCTTC 
CAGATGAGCG TTGACCTGAA GCCTTCATCA GAAAACCCTG AGGAGTGGAC AAAATACGAA 
TGTGTGTTTC AGCTCTCTGG AGTCAATGAA GATATCGTCC ATAGACTGGA GAAAACAAAA 
ATCCGGAGCA ATGAATCAAA TGACAACATG ATGATCATCA TTGTTGTTGC TGCTGTGGCT 
GTCCTTGGTC TCATTGGTGT GGTTGGTTTC ATCATCTACA AGAAGAAGAA TGCCAAGCGT 
CCACCTTCTC CTGTGGATAA CTCTAGACCC CCAGAGGAAA CCAAGTTTCT GCCAGAAGCC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012710961.1
CDS	14..736
Translation	MIGVEWDDETDKITGFNQYGYDGEDFLALNFDTKTWIAPVQQAVITKQKWDKTNVDYLINYHAEYAPEWLKKYVNYGKSSLMRTELPSVSVLRKSSSSPVSCHATGFYPNGAEMLWRKDGEEIHVGVEKGEILPNNDGTFQMSVDLKPSSENPEEWTKYECVFQLSGVNEDIVHRLEKTKIRSNESNDNMMIIIVVAAVAVLGLIGVVGFIIYKKKNAKRPPSPVDNSRPPEETKFLPEA

Target ORF information:

RefSeq Version	XM_012855507.1
Organism	Fundulus heteroclitus(Mummichog)
Definition	Fundulus heteroclitus major histocompatibility complex class I-related gene protein-like (LOC105920016), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012855507.1

ORF Insert Sequence:

ATGATTGGCG TTGAGTGGGA TGATGAGACA GACAAGATTA CTGGATTTAA TCAGTATGGT 
TATGATGGGG AAGACTTCCT TGCATTGAAC TTTGATACAA AGACATGGAT TGCTCCTGTT 
CAGCAAGCTG TCATCACCAA GCAGAAGTGG GACAAGACTA ATGTTGATTA CTTGATCAAT 
TATCATGCTG AGTATGCTCC AGAATGGTTG AAGAAGTATG TGAACTACGG AAAGAGCTCT 
CTGATGAGAA CAGAACTACC ATCAGTGTCT GTCCTCCGCA AGAGTTCCTC GTCTCCAGTC 
AGCTGCCACG CTACAGGTTT CTACCCCAAT GGAGCAGAGA TGTTGTGGAG GAAAGATGGA 
GAGGAGATTC ATGTCGGCGT GGAAAAAGGA GAGATCCTCC CTAACAATGA TGGGACCTTC 
CAGATGAGCG TTGACCTGAA GCCTTCATCA GAAAACCCTG AGGAGTGGAC AAAATACGAA 
TGTGTGTTTC AGCTCTCTGG AGTCAATGAA GATATCGTCC ATAGACTGGA GAAAACAAAA 
ATCCGGAGCA ATGAATCAAA TGACAACATG ATGATCATCA TTGTTGTTGC TGCTGTGGCT 
GTCCTTGGTC TCATTGGTGT GGTTGGTTTC ATCATCTACA AGAAGAAGAA TGCCAAGCGT 
CCACCTTCTC CTGTGGATAA CTCTAGACCC CCAGAGGAAA CCAAGTTTCT GCCAGAAGCC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC105920016 ( XM_012855507.2 ) cDNA ORF clone, Fundulus heteroclitus(mummichog) -> XP_012710961.2 Fundulus heteroclitus H-2 class I histocompatibility antigen, Q9 alpha chain (LOC105920016), mRNA.

Price & Availability↑

CloneID	OFu130121
Clone ID Related Accession (Same CDS sequence)	XM_012855507.2
Accession Version	XM_012855507.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1065bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-05-31
Organism	Fundulus heteroclitus(mummichog)
Product	H-2 class I histocompatibility antigen, Q9 alpha chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012224884.1) and transcript sequence (GCES01167075.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 1, 2017 this sequence version replaced XM_012855507.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Fundulus heteroclitus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 278 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGAAGACCT TGATTTTTGC GGTTCTGCTG GCAACATTTG GTCAACAAGC TGTGGTGGCA 
GTTACTCATT CATTGAAATA CTTCTACACG GCTTCATCTG GACTAAAAAG CTTTCCAGAG 
TTTGTGACTG TTGGGATGGT GGATGATCAG CCGTTCTCCT ACTATGATAG CGTCATTAGA 
AGAGAGACTC CCAAGCAGGA CTGGATGGCT AAGAATGAAG GTCCTGAGTA CTGGGAGACA 
CAGACTCAGA CGTCCATTGG TGCTGAGCAA ACCTACAAAG CTAACATTGA TATTGCTAAG 
CAGCGCTTCA ACCAGACTGG AGGTGTGCAT ATAGTCCAGC GGATGTATGG CGTTGAGTGG 
GACGATGAGA CAGACAAGAT TACTGGATTT AATCAGTTTG GTTATGATGG GGAAGACTTC 
CTTGCTTTGG ACTTTGATAC AAAGACGTGG ATTGCTCCTG TTCAGCAAGC TGTCATCACC 
AAGCAGAAGT GGGACAAGAC TAATGTTGAT TACTGGATCA ATTATCATGC TGAGTATGCT 
CCAGAATGGT TGAAGAAGTA TGTGAACTAT GGAAAGAGCT CTCTGATGAG AACAGAACTT 
CCATCAGTGT CTGTCCTCCG CAAGAGTTCC TCGTCTCCAG TCAGCTGCCA CGCTACAGGT 
TTCTACCCCA ATGGAGCAGA GATGTTGTGG AGGAAAGATG GAGAGGAGAT TCATGTCGGC 
GTGGAAAAAG GAGAGATCCT CCCTAACAAT GATGGGACCT TCCAGATGAG CGTTGACCTG 
AAGCCTTCAT CAGAAAACCC TGAGGAGTGG ACAAAATACG AATGTGTGTT TCAGCTCTCT 
GGAGTCAATG AAGATATCGT CCATAGACTG GAGAAAACAA AAATCCGGAG CAATGAATCA 
AATGACAACA TGATGATCAT CATTGTTGTT GCTGCTGTGG CTGTCCTTGG TCTCATTGGT 
GTGGTTGGTT TCATCATCTA CAAGAAGAAG AATGCCAAGC GTCCACCTTC TCCTGTGGAT 
AACTCTAGAC CCCCAGAGGA AACCAAGTTT CTGCCAGAAG CCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012710961.2
CDS	98..1162
Translation	MKTLIFAVLLATFGQQAVVAVTHSLKYFYTASSGLKSFPEFVTVGMVDDQPFSYYDSVIRRETPKQDWMAKNEGPEYWETQTQTSIGAEQTYKANIDIAKQRFNQTGGVHIVQRMYGVEWDDETDKITGFNQFGYDGEDFLALDFDTKTWIAPVQQAVITKQKWDKTNVDYWINYHAEYAPEWLKKYVNYGKSSLMRTELPSVSVLRKSSSSPVSCHATGFYPNGAEMLWRKDGEEIHVGVEKGEILPNNDGTFQMSVDLKPSSENPEEWTKYECVFQLSGVNEDIVHRLEKTKIRSNESNDNMMIIIVVAAVAVLGLIGVVGFIIYKKKNAKRPPSPVDNSRPPEETKFLPEA

Target ORF information:

RefSeq Version	XM_012855507.2
Organism	Fundulus heteroclitus(mummichog)
Definition	Fundulus heteroclitus H-2 class I histocompatibility antigen, Q9 alpha chain (LOC105920016), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012855507.2

ORF Insert Sequence:

ATGAAGACCT TGATTTTTGC GGTTCTGCTG GCAACATTTG GTCAACAAGC TGTGGTGGCA 
GTTACTCATT CATTGAAATA CTTCTACACG GCTTCATCTG GACTAAAAAG CTTTCCAGAG 
TTTGTGACTG TTGGGATGGT GGATGATCAG CCGTTCTCCT ACTATGATAG CGTCATTAGA 
AGAGAGACTC CCAAGCAGGA CTGGATGGCT AAGAATGAAG GTCCTGAGTA CTGGGAGACA 
CAGACTCAGA CGTCCATTGG TGCTGAGCAA ACCTACAAAG CTAACATTGA TATTGCTAAG 
CAGCGCTTCA ACCAGACTGG AGGTGTGCAT ATAGTCCAGC GGATGTATGG CGTTGAGTGG 
GACGATGAGA CAGACAAGAT TACTGGATTT AATCAGTTTG GTTATGATGG GGAAGACTTC 
CTTGCTTTGG ACTTTGATAC AAAGACGTGG ATTGCTCCTG TTCAGCAAGC TGTCATCACC 
AAGCAGAAGT GGGACAAGAC TAATGTTGAT TACTGGATCA ATTATCATGC TGAGTATGCT 
CCAGAATGGT TGAAGAAGTA TGTGAACTAT GGAAAGAGCT CTCTGATGAG AACAGAACTT 
CCATCAGTGT CTGTCCTCCG CAAGAGTTCC TCGTCTCCAG TCAGCTGCCA CGCTACAGGT 
TTCTACCCCA ATGGAGCAGA GATGTTGTGG AGGAAAGATG GAGAGGAGAT TCATGTCGGC 
GTGGAAAAAG GAGAGATCCT CCCTAACAAT GATGGGACCT TCCAGATGAG CGTTGACCTG 
AAGCCTTCAT CAGAAAACCC TGAGGAGTGG ACAAAATACG AATGTGTGTT TCAGCTCTCT 
GGAGTCAATG AAGATATCGT CCATAGACTG GAGAAAACAA AAATCCGGAG CAATGAATCA 
AATGACAACA TGATGATCAT CATTGTTGTT GCTGCTGTGG CTGTCCTTGG TCTCATTGGT 
GTGGTTGGTT TCATCATCTA CAAGAAGAAG AATGCCAAGC GTCCACCTTC TCCTGTGGAT 
AACTCTAGAC CCCCAGAGGA AACCAAGTTT CTGCCAGAAG CCTGA