| Gene Symbol | PFKM |
| Entrez Gene ID | 100034116 |
| Full Name | phosphofructokinase, muscle |
| Synonyms | ATP-PFK,PFK-A,PFK-M |
| Gene Type | protein-coding |
| Organism | Equus caballus(horse) |
ORF » Species Summary » Equus caballus » PFKM cDNA ORF clone
| Gene Symbol | PFKM |
| Entrez Gene ID | 100034116 |
| Full Name | phosphofructokinase, muscle |
| Synonyms | ATP-PFK,PFK-A,PFK-M |
| Gene Type | protein-coding |
| Organism | Equus caballus(horse) |
| mRNA | Protein | Name |
|---|---|---|
| XM_005611076.2 | XP_005611133.1 | ATP-dependent 6-phosphofructokinase, muscle type isoform X2 |
| XM_023642167.1 | XP_023497935.1 | ATP-dependent 6-phosphofructokinase, muscle type isoform X2 |
| XM_014740748.1 | XP_014596234.1 | ATP-dependent 6-phosphofructokinase, muscle type isoform X1 |
| XM_005611076.3 | XP_005611133.1 | ATP-dependent 6-phosphofructokinase, muscle type isoform X3 |
| NM_001081922.2 | NP_001075391.1 | ATP-dependent 6-phosphofructokinase, muscle type |
Annotation of the Protein Coding Regions of the Equine Genome.
Hestand MS, Kalbfleisch TS, Coleman SJ, Zeng Z, Liu J, Orlando L, MacLeod JN
PloS one10(6)e0124375(2015)
Molecular characterization of glycogen synthase 1 and its tissue expression profile with type II hexokinase and muscle-type phosphofructokinase in horses.
Echigoya Y, Okabe H, Itou T, Endo H, Sakai T
Molecular biology reports38(1)461-9(2011 Jan)
Molecular cloning of equine muscle-type phosphofructokinase cDNA.
Sato T, Itou T, Sakai T
The Journal of veterinary medical science65(5)645-8(2003 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The tissue expression profiles of eGYS1, equine type II hexokinase (eHKII) and muscle-type phosphofructokinase (ePFKM) were determined by real-time PCR and western blot analysis.
Title: Molecular characterization of glycogen synthase 1 and its tissue expression profile with type II hexokinase and muscle-type phosphofructokinase in horses.
The following PFKM gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PFKM cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OHb00123 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001081922.2 | |
| Accession Version | NM_001081922.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-11-15 | |
| Organism | Equus caballus(horse) | |
| Product | ATP-dependent 6-phosphofructokinase, muscle type | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AB088683.1 and CX601578.1. On May 14, 2015 this sequence version replaced NM_001081922.1. ##Evidence-Data-START## Transcript exon combination :: AB088683.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2452530, SAMEA2452531 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGACCCATG AAGAGCACCA TGCAGCCAAA ACCCTGGGGA TCGGCAAAGC CATCGCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001075391.1 |
| CDS | 1..2343 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001081922.2 |
1 | ATGACCCATG AAGAGCACCA TGCAGCCAAA ACCCTGGGGA TCGGCAAAGC CATCGCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OHb22366 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005611076.2 , XM_005611076.3 | |
| Accession Version | XM_005611076.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-11-19 | |
| Organism | Equus caballus(horse) | |
| Product | ATP-dependent 6-phosphofructokinase, muscle type isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867424.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 20, 2015 this sequence version replaced XM_005611076.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGACCCATG AAGAGCACCA TGCAGCCAAA ACCCTGGGGA TCGGCAAAGC CATCGCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005611133.1 |
| CDS | 97..2439 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005611076.2 |
1 | ATGACCCATG AAGAGCACCA TGCAGCCAAA ACCCTGGGGA TCGGCAAAGC CATCGCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OHb22366 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005611076.2 , XM_005611076.3 | |
| Accession Version | XM_005611076.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-01-22 | |
| Organism | Equus caballus(horse) | |
| Product | ATP-dependent 6-phosphofructokinase, muscle type isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009149.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_005611076.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGACCCATG AAGAGCACCA TGCAGCCAAA ACCCTGGGGA TCGGCAAAGC CATCGCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005611133.1 |
| CDS | 143..2485 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005611076.3 |
1 | ATGACCCATG AAGAGCACCA TGCAGCCAAA ACCCTGGGGA TCGGCAAAGC CATCGCCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OHb31354 | |
| Clone ID Related Accession (Same CDS sequence) | XM_014740748.1 | |
| Accession Version | XM_014740748.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2556bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-01-22 | |
| Organism | Equus caballus(horse) | |
| Product | ATP-dependent 6-phosphofructokinase, muscle type isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009149.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCGTAAAG AGGAATTACA TCTGAAATTT TTCATGTGTG TGATTCAATC TCGCCAATTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_014596234.1 |
| CDS | 10..2565 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_014740748.1 |
1 | ATGCGTAAAG AGGAATTACA TCTGAAATTT TTCATGTGTG TGATTCAATC TCGCCAATTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OHb66016 | |
| Clone ID Related Accession (Same CDS sequence) | XM_023642167.1 | |
| Accession Version | XM_023642167.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2433bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-01-22 | |
| Organism | Equus caballus(horse) | |
| Product | ATP-dependent 6-phosphofructokinase, muscle type isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009149.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCGTAAAG AGGAATTACA TCTGAAATTT TTCATGTGTG TGATTCAATC TCGCCAATTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_023497935.1 |
| CDS | 10..2442 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_023642167.1 |
1 | ATGCGTAAAG AGGAATTACA TCTGAAATTT TTCATGTGTG TGATTCAATC TCGCCAATTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Annotation of the Protein Coding Regions of the Equine Genome. |
Molecular characterization of glycogen synthase 1 and its tissue expression profile with type II hexokinase and muscle-type phosphofructokinase in horses. |
Molecular cloning of equine muscle-type phosphofructokinase cDNA. |