LOC109545921 cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109545921
Entrez Gene ID	109545921
Full Name	extensin-like
Gene Type	protein-coding
Organism	Dendroctonus ponderosae(mountain pine beetle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019916762.1	XP_019772321.1	extensin-like

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Quantitative metabolome, proteome and transcriptome analysis of midgut and fat body tissues in the mountain pine beetle, Dendroctonus ponderosae Hopkins, and insights into pheromone biosynthesis.
Keeling CI, Li M, Sandhu HK, Henderson H, Yuen MM, Bohlmann J
Insect biochemistry and molecular biology70170-83(2016 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC109545921 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109545921 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe34978	XM_019916762.1 Latest version!	Dendroctonus ponderosae extensin-like (LOC109545921), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109545921 ( XM_019916762.1 ) cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle) -> XP_019772321.1 Dendroctonus ponderosae extensin-like (LOC109545921), mRNA.

Price & Availability↑

CloneID	ODe34978
Clone ID Related Accession (Same CDS sequence)	XM_019916762.1
Accession Version	XM_019916762.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1215bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-09
Organism	Dendroctonus ponderosae(mountain pine beetle)
Product	extensin-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017850669.1) and transcript sequence (GDAR01006898.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases assembly gap :: added 193 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTTTGACG AGCTGGATTC CAGCCATCCC AAAGACCTTT TGGACGACTC GCCGCGGAAG 
CGGAAAGCAC GAGGGGCTCT AAAGAAGAAG CTGGAGGCGA CTGGGGCTGC GTCAGTCAAG 
TTCACGCAAC CCGCAATCGA AATTGCGGCG CCACCTCAGC CCTTCTTGCA AGCCCAGCCG 
GCCCCTTCAG TTATCACCAG GATGTTGCAG ACAAAACCGG GTGCTTCGGT TTATCCAGTT 
GGGCGGATCC GTCCCAAACA GTTTGCAACT ATGCGAGATG ATGATTCGGA CGAATCCAGT 
CCCAAACACT CACCAGCTTC GTCACCGTCC ATCGGGCAGA TTGGCGGAGT TTCCACAGTG 
TACAACTTGG CAGGGGCTCC ACAAGGCAAT GCCCCGCTGC CATATCGCCA TTCTGGGCCT 
CCGCATCCAG GAATGAACCA TTATCCCCGA GGTCCTCTGG GAATGGCCGC TCCGGCGTAT 
CATCGGGGGA TGGATCCCTC CCCGTCTGGG GGCTCTGTTA TCAGCTTCTC TGATGCTCCA 
GCAGCAGCAC CCAGTGGCTC CGCCCCAATC AGCGCGCCGG ATAACCTCAA TAGGCGCCCC 
CAAGTCAATC AAAGATACCC GCCCCCTACA GGGGCGGCTT TAGGCACCCC CCGTCCGCCT 
CTGCATTTGT ACCGGCCGCC GCCCCCGGCC AATAGTGGAA CCCCTGTGGG GGCCCCCTAC 
GTGCCGCCCT TGGGGGCCAC CAATGGGCCG CCTCCTTCGC ACCCTCCATA TCATGTGGCG 
GGGGCAGTAA ATGGGCCGCT GCCGCCCCCC CAGCCGTATC CGTCGCCACC GGTCGCCGCC 
AATGTACCAC CCGCAGTACT CCCCTACCCG CCTTCCGTTC CAGCTGCCCC CAACATTGGG 
GCGCAGCCCG CCCACTCGCA ATATGTGCCG CCGCAGCCGC CTGTTTCGGA CGGTGCGCCC 
CCATCAGGCC ACCCACCTGA GGGGTATTAT GGCAGTTATC CACCTTCTAC GGCCAATGAA 
GACGCCTTGC AACCGTCTTC GTATGGAGGA TTGCCGCCAG AAACAGGTCC TCCATATCAG 
GAGCCGTATG GAAGTGAAGG AGCCTCGAAT GCGCCGGCCG GCCCTGCAAA AGCGTTCGAA 
GAAGAGTCCG AAGGCGAGTT TGCTGGCTTG GCATCGTATT TTTCTAGCCA AAGACAGGAC 
GACTTGGACT CATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019772321.1
CDS	210..1424
Translation	MFDELDSSHPKDLLDDSPRKRKARGALKKKLEATGAASVKFTQPAIEIAAPPQPFLQAQPAPSVITRMLQTKPGASVYPVGRIRPKQFATMRDDDSDESSPKHSPASSPSIGQIGGVSTVYNLAGAPQGNAPLPYRHSGPPHPGMNHYPRGPLGMAAPAYHRGMDPSPSGGSVISFSDAPAAAPSGSAPISAPDNLNRRPQVNQRYPPPTGAALGTPRPPLHLYRPPPPANSGTPVGAPYVPPLGATNGPPPSHPPYHVAGAVNGPLPPPQPYPSPPVAANVPPAVLPYPPSVPAAPNIGAQPAHSQYVPPQPPVSDGAPPSGHPPEGYYGSYPPSTANEDALQPSSYGGLPPETGPPYQEPYGSEGASNAPAGPAKAFEEESEGEFAGLASYFSSQRQDDLDS

Target ORF information:

RefSeq Version	XM_019916762.1
Organism	Dendroctonus ponderosae(mountain pine beetle)
Definition	Dendroctonus ponderosae extensin-like (LOC109545921), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019916762.1

ORF Insert Sequence:

ATGTTTGACG AGCTGGATTC CAGCCATCCC AAAGACCTTT TGGACGACTC GCCGCGGAAG 
CGGAAAGCAC GAGGGGCTCT AAAGAAGAAG CTGGAGGCGA CTGGGGCTGC GTCAGTCAAG 
TTCACGCAAC CCGCAATCGA AATTGCGGCG CCACCTCAGC CCTTCTTGCA AGCCCAGCCG 
GCCCCTTCAG TTATCACCAG GATGTTGCAG ACAAAACCGG GTGCTTCGGT TTATCCAGTT 
GGGCGGATCC GTCCCAAACA GTTTGCAACT ATGCGAGATG ATGATTCGGA CGAATCCAGT 
CCCAAACACT CACCAGCTTC GTCACCGTCC ATCGGGCAGA TTGGCGGAGT TTCCACAGTG 
TACAACTTGG CAGGGGCTCC ACAAGGCAAT GCCCCGCTGC CATATCGCCA TTCTGGGCCT 
CCGCATCCAG GAATGAACCA TTATCCCCGA GGTCCTCTGG GAATGGCCGC TCCGGCGTAT 
CATCGGGGGA TGGATCCCTC CCCGTCTGGG GGCTCTGTTA TCAGCTTCTC TGATGCTCCA 
GCAGCAGCAC CCAGTGGCTC CGCCCCAATC AGCGCGCCGG ATAACCTCAA TAGGCGCCCC 
CAAGTCAATC AAAGATACCC GCCCCCTACA GGGGCGGCTT TAGGCACCCC CCGTCCGCCT 
CTGCATTTGT ACCGGCCGCC GCCCCCGGCC AATAGTGGAA CCCCTGTGGG GGCCCCCTAC 
GTGCCGCCCT TGGGGGCCAC CAATGGGCCG CCTCCTTCGC ACCCTCCATA TCATGTGGCG 
GGGGCAGTAA ATGGGCCGCT GCCGCCCCCC CAGCCGTATC CGTCGCCACC GGTCGCCGCC 
AATGTACCAC CCGCAGTACT CCCCTACCCG CCTTCCGTTC CAGCTGCCCC CAACATTGGG 
GCGCAGCCCG CCCACTCGCA ATATGTGCCG CCGCAGCCGC CTGTTTCGGA CGGTGCGCCC 
CCATCAGGCC ACCCACCTGA GGGGTATTAT GGCAGTTATC CACCTTCTAC GGCCAATGAA 
GACGCCTTGC AACCGTCTTC GTATGGAGGA TTGCCGCCAG AAACAGGTCC TCCATATCAG 
GAGCCGTATG GAAGTGAAGG AGCCTCGAAT GCGCCGGCCG GCCCTGCAAA AGCGTTCGAA 
GAAGAGTCCG AAGGCGAGTT TGCTGGCTTG GCATCGTATT TTTCTAGCCA AAGACAGGAC 
GACTTGGACT CATAG