atg10 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	atg10
Entrez Gene ID	641330
Full Name	ATG10 autophagy related 10 homolog (S. cerevisiae)
Synonyms	im:7153729,zgc:123341
General protein information	Preferred Names ATG10 autophagy related 10 homolog (S. cerevisiae) Names ubiquitin-like-conjugating enzyme ATG10
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001037124.1	NP_001032201.1	ubiquitin-like-conjugating enzyme ATG10

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	ATG10	XP_005618213.1
Rattus norvegicus (Norway rat)	Atg10	NP_001102975.1
	LOC711835	XP_001111368.2
Gallus gallus (chicken)	ATG10	XP_424902.2
Danio rerio (zebrafish)	atg10	NP_001032201.1
Pan troglodytes (chimpanzee)	ATG10	XP_003310709.1
Bos taurus (cattle)	ATG10	NP_001077000.1
Xenopus tropicalis (tropical clawed frog)	atg10	XP_004910943.1
Homo sapiens (human)	ATG10	NP_001124500.1
Mus musculus (house mouse)	Atg10	NP_080046.3
Arabidopsis thaliana (thale cress)	ATG10	NP_850533.1

Gene Ontology
Bibliography

Related articles in PubMed

The circadian clock regulates autophagy directly through the nuclear hormone receptor Nr1d1/Rev-erb? and indirectly via Cebpb/(C/ebp?) in zebrafish.
Huang G, Zhang F, Ye Q, Wang H
Autophagy12(8)1292-309(2016 Aug)

Amikacin-induced Fin Reduction is Mediated by Autophagy.
Tsai IT, Chen YH, Chen YH, Wang YH
Journal of toxicologic pathology26(1)79-82(2013 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following atg10 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the atg10 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa33860	NM_001037124.1 Latest version!	Danio rerio ATG10 autophagy related 10 homolog (S. cerevisiae) (atg10), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

atg10 ( NM_001037124.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001032201.1 Danio rerio ATG10 autophagy related 10 homolog (S. cerevisiae) (atg10), mRNA.

Price & Availability↑

CloneID	ODa33860
Clone ID Related Accession (Same CDS sequence)	NM_001037124.1
Accession Version	NM_001037124.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-24
Organism	Danio rerio(zebrafish)
Product	ubiquitin-like-conjugating enzyme ATG10
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC107646.1. ##Evidence-Data-START## Transcript exon combination :: BC107646.1, EH439629.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGATGACCG GTGAGAGAAA GCCTGCATCA TGTTTTCTGG ATGAAAATAC CTTCCGGCTT 
TGCTGCCGGC TTTTTCTCCA GCACTCGGAG AGCATCCAGG ACGGCTGGAT CTGGGAGCAG 
ATCAAGGGCT CTGATGAAGG CTTCATGAAG AAGACTGTGC TCATCCCTGT AAAATCTAGC 
CTTTTGGACA AACAGCATGA GTCTATACAG GCTGAAAACA CTGAACTTCC GACAGACGAC 
TTTGAGGCAG ACGCTGAGGA TGAAACGGCT GGAGTTGATG CGGTGTGTGA AAGTCATGCT 
GTGCTGCGCT ATGAATACCA CGTTCTGTAT TCCTGCAGCT ATCAGATCCC CGTCCTCTAT 
TTCAGAGCAT CAGCGTTAGA TGGGCGCTCG CTTTCTCTGG AGGAGGTGTG GAGCAACGTT 
CATCCAAACT ACAGACAGAG GCTGAAGCAG GAGCCCTGGG ACACACTGAC ACAGCAGGAA 
CATCCTCTAC TTGGCCAGCC GTTTTTCATG CTTCATCCAT GTCGCACAGA GGAGTTCATG 
AAACCCGCTC TGGAATTAGC ACATGCTCAA AACAGGAGGG TGAACTATAT TGTGAGCTGG 
CTCAGTGTTG TGGGTCCTGT CGTCGGCCTG GACGTCCCGT TGAGCTTCAG CACTGCCGTT 
TCTGCTCCAG ATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001032201.1
CDS	55..729
Translation	MMTGERKPASCFLDENTFRLCCRLFLQHSESIQDGWIWEQIKGSDEGFMKKTVLIPVKSSLLDKQHESIQAENTELPTDDFEADAEDETAGVDAVCESHAVLRYEYHVLYSCSYQIPVLYFRASALDGRSLSLEEVWSNVHPNYRQRLKQEPWDTLTQQEHPLLGQPFFMLHPCRTEEFMKPALELAHAQNRRVNYIVSWLSVVGPVVGLDVPLSFSTAVSAPD

Target ORF information:

RefSeq Version	NM_001037124.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ATG10 autophagy related 10 homolog (S. cerevisiae) (atg10), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001037124.1

ORF Insert Sequence:

ATGATGACCG GTGAGAGAAA GCCTGCATCA TGTTTTCTGG ATGAAAATAC CTTCCGGCTT 
TGCTGCCGGC TTTTTCTCCA GCACTCGGAG AGCATCCAGG ACGGCTGGAT CTGGGAGCAG 
ATCAAGGGCT CTGATGAAGG CTTCATGAAG AAGACTGTGC TCATCCCTGT AAAATCTAGC 
CTTTTGGACA AACAGCATGA GTCTATACAG GCTGAAAACA CTGAACTTCC GACAGACGAC 
TTTGAGGCAG ACGCTGAGGA TGAAACGGCT GGAGTTGATG CGGTGTGTGA AAGTCATGCT 
GTGCTGCGCT ATGAATACCA CGTTCTGTAT TCCTGCAGCT ATCAGATCCC CGTCCTCTAT 
TTCAGAGCAT CAGCGTTAGA TGGGCGCTCG CTTTCTCTGG AGGAGGTGTG GAGCAACGTT 
CATCCAAACT ACAGACAGAG GCTGAAGCAG GAGCCCTGGG ACACACTGAC ACAGCAGGAA 
CATCCTCTAC TTGGCCAGCC GTTTTTCATG CTTCATCCAT GTCGCACAGA GGAGTTCATG 
AAACCCGCTC TGGAATTAGC ACATGCTCAA AACAGGAGGG TGAACTATAT TGTGAGCTGG 
CTCAGTGTTG TGGGTCCTGT CGTCGGCCTG GACGTCCCGT TGAGCTTCAG CACTGCCGTT 
TCTGCTCCAG ATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The circadian clock regulates autophagy directly through the nuclear hormone receptor Nr1d1/Rev-erb? and indirectly via Cebpb/(C/ebp?) in zebrafish.
Autophagy12(8)1292-309(2016 Aug)
Huang G,Zhang F,Ye Q,Wang H

Amikacin-induced Fin Reduction is Mediated by Autophagy.
Journal of toxicologic pathology26(1)79-82(2013 Mar)
Tsai IT,Chen YH,Chen YH,Wang YH