tor1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	tor1
Entrez Gene ID	565062
Full Name	torsin family 1
Synonyms	im:7165310,si:ch73-178d14.1
General protein information	Preferred Names torsin family 1 Names torsin-1B
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001200015.1	NP_001186944.1	torsin-1B precursor
XM_005161523.1	XP_005161580.1	torsin-1B isoform X1

Pathways from BioSystems

Homologies

Homo sapiens (human)	TOR1B	NP_055321.1
Gallus gallus (chicken)	TOR1B	XP_415473.3
Pan troglodytes (chimpanzee)	TOR1B	XP_001164236.1
	TOR1B	XP_001107456.1
Caenorhabditis elegans (roundworm)	tor-1	NP_502684.2
Bos taurus (cattle)	TOR1B	XP_002691721.2
Danio rerio (zebrafish)	tor1	NP_001186944.1
Xenopus tropicalis (tropical clawed frog)	tor1a	NP_001039096.1
Rattus norvegicus (Norway rat)	Tor1b	NP_001034286.1
Canis lupus familiaris (dog)	TOR1B	XP_003639349.1
Mus musculus (house mouse)	Tor1b	NP_598434.2
Caenorhabditis elegans (roundworm)	ooc-5	NP_495917.1
Caenorhabditis elegans (roundworm)	tor-2	NP_502683.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

The zebrafish homologue of the human DYT1 dystonia gene is widely expressed in CNS neurons but non-essential for early motor system development.
Sager JJ, Torres GE, Burton EA
PloS one7(9)e45175(2012)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The zebrafish homologue of the human DYT1 dystonia gene is widely expressed in CNS neurons but non-essential for early motor system development.
Title: The zebrafish homologue of the human DYT1 dystonia gene is widely expressed in CNS neurons but non-essential for early motor system development.

The following tor1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tor1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa32050	NM_001200015.1 Latest version!	Danio rerio torsin family 1 (tor1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa25464	XM_005161523.1 Latest version!	Danio rerio torsin family 1 (tor1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

tor1 ( NM_001200015.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001186944.1 Danio rerio torsin family 1 (tor1), mRNA.

Price & Availability↑

CloneID	ODa32050
Clone ID Related Accession (Same CDS sequence)	NM_001200015.1
Accession Version	NM_001200015.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1011bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	torsin-1B precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU694530.7, DY572024.1, EH571944.1 and EH570953.1. On Jan 13, 2011 this sequence version replaced XR_045142.2. ##Evidence-Data-START## Transcript exon combination :: BC049519.1, GFIL01041688.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGCGCTCGG CCTGGCTGCT GTCGGCCGGC TGTGTGCTGT GGGTCTGCTC TCTGACAGCC 
GCTATTGAGC CCATCAGCAC CAGTATAGCG GTCGGGATGG CAGCGGCTCT GACGGGCTTT 
CTGGCCGGAT ATCAGAACAT GTTTTATTAC TTCAATGAGT GCTGCAGACC CGAGTGGATC 
TCTTACAACA AAACAGGCCT GAAGTATGAC CTGGACACAA AGCTTTATGG GCAGCACGTC 
GCAGGTCAAG TCATCCTGAA AGCCGTCACG GGCTTCATGA ACAACAAAAA ACCAAAGAAA 
CCGCTGGTTC TGTCCCTGCA CGGCTGGACC GGCACCGGGA AGAACTTTGT GAGCCAACTA 
TTGGCTGAAA ACATTTACGT GAAAGGCATG GAGAGCAGCT TCGTCCATCT GTTTACAGCA 
ACAGCACACT TTCCTCATGA GATCCACATA GACACCTACA AGACGCAGTT ACAGGATTGG 
ATACGAGGAA ACGTTTCCAT CTGCCCTCGT TCCATGTTCA TTTTCGATGA AATGGATAAA 
ATGCATCCCG GGTTGATCGA CAGTATAAAG CCGTACCTGG ATTTTTACGA TAACCTGAAT 
GGAGTGTCTT ACAGAGAGGC CATCTTCATC TTCCTCAGTA ACGCCGGTGG TGAGAACATC 
GTTCAGGTGG CTCTGGATTT CTGGAAGGAC GGCAAAGAAC GAGAAGAGAT CCAGCTGAAG 
CATCTGGAGA CGGCGCTTTC ACTGTCTGTC TTCAACAACA AAAACAGCGG TTTCTGGCAC 
ACCAGTCTGA TCGATAAGAA CCTGGTGGAT TTCTTCGTGC CGTTTCTCCC TCTGGAGTAC 
AAGCACATCA TTCAGTGCGG TCTGGCGGAG ATGATCGCCA AGGGGCATTC GCCTGACAAA 
GAAGTGGTGG AAAAAATGGC CCACGACCTC AACTATTTCC CTAAAGAGGA GCGCGTTTTC 
TCCATGCAGG GCTGCAAAGT CATTCCCAGC AGACTGGACT TCTATATCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001186944.1
CDS	140..1150
Translation	MRSAWLLSAGCVLWVCSLTAAIEPISTSIAVGMAAALTGFLAGYQNMFYYFNECCRPEWISYNKTGLKYDLDTKLYGQHVAGQVILKAVTGFMNNKKPKKPLVLSLHGWTGTGKNFVSQLLAENIYVKGMESSFVHLFTATAHFPHEIHIDTYKTQLQDWIRGNVSICPRSMFIFDEMDKMHPGLIDSIKPYLDFYDNLNGVSYREAIFIFLSNAGGENIVQVALDFWKDGKEREEIQLKHLETALSLSVFNNKNSGFWHTSLIDKNLVDFFVPFLPLEYKHIIQCGLAEMIAKGHSPDKEVVEKMAHDLNYFPKEERVFSMQGCKVIPSRLDFYI

Target ORF information:

RefSeq Version	NM_001200015.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio torsin family 1 (tor1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001200015.1

ORF Insert Sequence:

ATGCGCTCGG CCTGGCTGCT GTCGGCCGGC TGTGTGCTGT GGGTCTGCTC TCTGACAGCC 
GCTATTGAGC CCATCAGCAC CAGTATAGCG GTCGGGATGG CAGCGGCTCT GACGGGCTTT 
CTGGCCGGAT ATCAGAACAT GTTTTATTAC TTCAATGAGT GCTGCAGACC CGAGTGGATC 
TCTTACAACA AAACAGGCCT GAAGTATGAC CTGGACACAA AGCTTTATGG GCAGCACGTC 
GCAGGTCAAG TCATCCTGAA AGCCGTCACG GGCTTCATGA ACAACAAAAA ACCAAAGAAA 
CCGCTGGTTC TGTCCCTGCA CGGCTGGACC GGCACCGGGA AGAACTTTGT GAGCCAACTA 
TTGGCTGAAA ACATTTACGT GAAAGGCATG GAGAGCAGCT TCGTCCATCT GTTTACAGCA 
ACAGCACACT TTCCTCATGA GATCCACATA GACACCTACA AGACGCAGTT ACAGGATTGG 
ATACGAGGAA ACGTTTCCAT CTGCCCTCGT TCCATGTTCA TTTTCGATGA AATGGATAAA 
ATGCATCCCG GGTTGATCGA CAGTATAAAG CCGTACCTGG ATTTTTACGA TAACCTGAAT 
GGAGTGTCTT ACAGAGAGGC CATCTTCATC TTCCTCAGTA ACGCCGGTGG TGAGAACATC 
GTTCAGGTGG CTCTGGATTT CTGGAAGGAC GGCAAAGAAC GAGAAGAGAT CCAGCTGAAG 
CATCTGGAGA CGGCGCTTTC ACTGTCTGTC TTCAACAACA AAAACAGCGG TTTCTGGCAC 
ACCAGTCTGA TCGATAAGAA CCTGGTGGAT TTCTTCGTGC CGTTTCTCCC TCTGGAGTAC 
AAGCACATCA TTCAGTGCGG TCTGGCGGAG ATGATCGCCA AGGGGCATTC GCCTGACAAA 
GAAGTGGTGG AAAAAATGGC CCACGACCTC AACTATTTCC CTAAAGAGGA GCGCGTTTTC 
TCCATGCAGG GCTGCAAAGT CATTCCCAGC AGACTGGACT TCTATATCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

tor1 ( XM_005161523.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005161580.1 Danio rerio torsin family 1 (tor1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa25464
Clone ID Related Accession (Same CDS sequence)	XM_005161523.1
Accession Version	XM_005161523.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1011bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	torsin-1B isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACGCTC GGCCTCCTCG CGCATGGACG ACGTTATTTC TCTGTATTTT GATCTCCGGG 
CTGGTCGTGG AGGCCATCGA GCCCGTGACA ACCTCACTGC TGGTGGTGGG AACAGGAACA 
GCGATGCTCG GCAGGAAAAT CTACCGCTAT ATTTATGAAA ACTGCCACGA AAACTGGGTC 
AACTTTAACG CCACAGGCCT GAAGTATGAC CTGGACACAA AGCTTTATGG GCAGCACGTC 
GCAGGTCAAG TCATCCTGAA AGCCGTCACG GGCTTCATGA ACAACAAAAA ACCAAAGAAA 
CCGCTGGTTC TGTCCCTGCA CGGCTGGACC GGCACCGGGA AGAACTTTGT GAGCCAACTA 
TTGGCTGAAA ACATTTACGT GAAAGGCATG GAGAGCAGCT TCGTCCATCT GTTTACAGCA 
ACAGCACACT TTCCTCATGA GATCCACATA GACACCTACA AGACGCAGTT ACAGGATTGG 
ATACGAGGAA ACGTTTCCAT CTGCCCTCGT TCCATGTTCA TTTTCGATGA AATGGATAAA 
ATGCATCCCG GGTTGATCGA CAGTATAAAG CCGTACCTGG ATTTTTACGA TAACCTGAAT 
GGAGTGTCTT ACAGAGAGGC CATCTTCATC TTCCTCAGTA ACGCCGGTGG TGAGAACATC 
GTTCAGGTGG CTCTGGATTT CTGGAAGGAC GGCAAAGAAC GAGAAGAGAT CCAGCTGAAG 
CATCTGGAGA CGGCGCTTTC ACTGTCTGTC TTCAACAACA AAAACAGCGG TTTCTGGCAC 
ACCAGTCTGA TCGATAAGAA CCTGGTGGAT TTCTTCGTGC CGTTTCTCCC TCTGGAGTAC 
AAGCACATCA TTCAGTGCGG TCTGGCGGAG ATGATCGCCA AGGGGCATTC GCCTGACAAA 
GAAGTGGTGG AAAAAATGGC CCACGACCTC AACTATTTCC CTAAAGAGGA GCGCGTTTTC 
TCCATGCAGG GCTGCAAAGT CATTCCCAGC AGACTGGACT TCTATATCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005161580.1
CDS	138..1148
Translation	MNARPPRAWTTLFLCILISGLVVEAIEPVTTSLLVVGTGTAMLGRKIYRYIYENCHENWVNFNATGLKYDLDTKLYGQHVAGQVILKAVTGFMNNKKPKKPLVLSLHGWTGTGKNFVSQLLAENIYVKGMESSFVHLFTATAHFPHEIHIDTYKTQLQDWIRGNVSICPRSMFIFDEMDKMHPGLIDSIKPYLDFYDNLNGVSYREAIFIFLSNAGGENIVQVALDFWKDGKEREEIQLKHLETALSLSVFNNKNSGFWHTSLIDKNLVDFFVPFLPLEYKHIIQCGLAEMIAKGHSPDKEVVEKMAHDLNYFPKEERVFSMQGCKVIPSRLDFYI

Target ORF information:

RefSeq Version	XM_005161523.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio torsin family 1 (tor1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005161523.1

ORF Insert Sequence:

ATGAACGCTC GGCCTCCTCG CGCATGGACG ACGTTATTTC TCTGTATTTT GATCTCCGGG 
CTGGTCGTGG AGGCCATCGA GCCCGTGACA ACCTCACTGC TGGTGGTGGG AACAGGAACA 
GCGATGCTCG GCAGGAAAAT CTACCGCTAT ATTTATGAAA ACTGCCACGA AAACTGGGTC 
AACTTTAACG CCACAGGCCT GAAGTATGAC CTGGACACAA AGCTTTATGG GCAGCACGTC 
GCAGGTCAAG TCATCCTGAA AGCCGTCACG GGCTTCATGA ACAACAAAAA ACCAAAGAAA 
CCGCTGGTTC TGTCCCTGCA CGGCTGGACC GGCACCGGGA AGAACTTTGT GAGCCAACTA 
TTGGCTGAAA ACATTTACGT GAAAGGCATG GAGAGCAGCT TCGTCCATCT GTTTACAGCA 
ACAGCACACT TTCCTCATGA GATCCACATA GACACCTACA AGACGCAGTT ACAGGATTGG 
ATACGAGGAA ACGTTTCCAT CTGCCCTCGT TCCATGTTCA TTTTCGATGA AATGGATAAA 
ATGCATCCCG GGTTGATCGA CAGTATAAAG CCGTACCTGG ATTTTTACGA TAACCTGAAT 
GGAGTGTCTT ACAGAGAGGC CATCTTCATC TTCCTCAGTA ACGCCGGTGG TGAGAACATC 
GTTCAGGTGG CTCTGGATTT CTGGAAGGAC GGCAAAGAAC GAGAAGAGAT CCAGCTGAAG 
CATCTGGAGA CGGCGCTTTC ACTGTCTGTC TTCAACAACA AAAACAGCGG TTTCTGGCAC 
ACCAGTCTGA TCGATAAGAA CCTGGTGGAT TTCTTCGTGC CGTTTCTCCC TCTGGAGTAC 
AAGCACATCA TTCAGTGCGG TCTGGCGGAG ATGATCGCCA AGGGGCATTC GCCTGACAAA 
GAAGTGGTGG AAAAAATGGC CCACGACCTC AACTATTTCC CTAAAGAGGA GCGCGTTTTC 
TCCATGCAGG GCTGCAAAGT CATTCCCAGC AGACTGGACT TCTATATCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

The zebrafish homologue of the human DYT1 dystonia gene is widely expressed in CNS neurons but non-essential for early motor system development.
PloS one7(9)e45175(2012)
Sager JJ,Torres GE,Burton EA