eri1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	eri1
Entrez Gene ID	553641
Full Name	exoribonuclease 1
Synonyms	thex1,zgc:110635
General protein information	Preferred Names exoribonuclease 1 Names 3'-5' exoribonuclease 1 three prime histone mRNA exonuclease 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001020614.1	NP_001018450.1	3'-5' exoribonuclease 1

Pathways from BioSystems

Homologies

Bos taurus (cattle)	ERI1	XP_002699843.1
Schizosaccharomyces pombe (fission yeast)	eri1	XP_001713129.1
	LOC699381	XP_002805307.1
Canis lupus familiaris (dog)	ERI1	XP_539997.2
Gallus gallus (chicken)	ERI1	NP_001006450.1
Danio rerio (zebrafish)	eri1	NP_001018450.1
Caenorhabditis elegans (roundworm)	eri-1	NP_741293.1
Pan troglodytes (chimpanzee)	ERI1	XP_001136735.1
Mus musculus (house mouse)	Eri1	NP_080343.4
Rattus norvegicus (Norway rat)	Eri1	NP_001014165.1
Xenopus tropicalis (tropical clawed frog)	eri1	NP_001016146.1
Homo sapiens (human)	ERI1	NP_699163.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Treatment with small interfering RNA affects the microRNA pathway and causes unspecific defects in zebrafish embryos.
Zhao XF, Fjose A, Larsen N, Helvik JV, Drivenes ?
The FEBS journal275(9)2177-84(2008 May)

Functional analysis of human hematopoietic stem cell gene expression using zebrafish.
Eckfeldt CE, Mendenhall EM, Flynn CM, Wang TF, Pickart MA, Grindle SM, Ekker SC, Verfaillie CM
PLoS biology3(8)e254(2005 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following eri1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the eri1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa36146	NM_001020614.1 Latest version!	Danio rerio exoribonuclease 1 (eri1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

eri1 ( NM_001020614.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001018450.1 Danio rerio exoribonuclease 1 (eri1), mRNA.

Price & Availability↑

CloneID	ODa36146
Clone ID Related Accession (Same CDS sequence)	NM_001020614.1
Accession Version	NM_001020614.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-11-15
Organism	Danio rerio(zebrafish)
Product	3'-5' exoribonuclease 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095343.1. On Jul 6, 2005 this sequence version replaced XM_696796.1. ##Evidence-Data-START## Transcript exon combination :: BC095343.1, BC164140.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGAGACGA AGGAAAAGAG CCGTAAACCT CCAAATAAGA CTCCACAGTC TGAAGGAGAT 
CAGGAGGATC AACCCTGTCC TGATACTTCC TGTGAAAAAA ATGAAGATCA GGAGCCTTCC 
TCACCAAAAC AGGGAGAGTT CAGTGATCCG GTGTATAAAG AGATTGCATT GGCAAATGGT 
GCCATCAACC GAATGAACAG AGAAGAGTTG CGTGCGAAAT GCACAGAGCT GAAACTTGAC 
ACACGTGGAG TTAATGATGT CCTAAGGAAG CGCCTCAAAA GCTACTACAA AAAGCAGAAG 
TTGATGCATT CACCTGCTGC AGAAGGGAAC AGTGACATGT ACTTTGACTA CATCTGTGTG 
GTGGATTTTG AAGCAACATG CGAAGAGAAT AACCCACCAG ATTACCTCCA TGAAATCATT 
GAGTTCCCCA TGGTGTTGAT CGACACACAC ACACTGGAGA TTGTAGACTC GTTTCAGGAG 
TATGTGAAGC CAGTGCTGCA CCCACAGCTC TCTGAGTTTT GTGTAAAACT TACCGGAATA 
ACGCAGGAAA TGGTGGATGA GGCAAAAACA TTCCATCAAG TTTTAAAGCG AGCAATTTCT 
TGGCTTCAGG AAAAAGAACT GGGCACAAAA TACAAATATA TGTTTTTGAC AGACGGGTCT 
TGGGACATGG GGAAATTTCT TCATACACAG TGCAAACTGA GTCGCATCAG ATACCCACAG 
TTTGCCAGAA AATGGATCAA TATCAGAAAG TCTTATGGGA ATTTTTATAA GGTTCCTCGT 
ACTCAGACGA AGCTGATCTG CATGCTGGAG AATCTGGGGA TGGAGTATGA TGGACGTCCG 
CACTGTGGTC TAGATGACTC ACGCAACATT GCCAGAATCG CCATCCACAT GCTGAAGGAC 
GGCTGTCAGC TGAGGGTGAA TGAGTGCTTG CATTCAGGAG AACCGCGGAG CGTGCCTATC 
TCTGCCCCTA TTGAAGGAGC ACCAGCACCT CAGCCCCCCA AAAAACGAGA CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001018450.1
CDS	270..1283
Translation	METKEKSRKPPNKTPQSEGDQEDQPCPDTSCEKNEDQEPSSPKQGEFSDPVYKEIALANGAINRMNREELRAKCTELKLDTRGVNDVLRKRLKSYYKKQKLMHSPAAEGNSDMYFDYICVVDFEATCEENNPPDYLHEIIEFPMVLIDTHTLEIVDSFQEYVKPVLHPQLSEFCVKLTGITQEMVDEAKTFHQVLKRAISWLQEKELGTKYKYMFLTDGSWDMGKFLHTQCKLSRIRYPQFARKWINIRKSYGNFYKVPRTQTKLICMLENLGMEYDGRPHCGLDDSRNIARIAIHMLKDGCQLRVNECLHSGEPRSVPISAPIEGAPAPQPPKKRD

Target ORF information:

RefSeq Version	NM_001020614.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio exoribonuclease 1 (eri1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001020614.1

ORF Insert Sequence:

ATGGAGACGA AGGAAAAGAG CCGTAAACCT CCAAATAAGA CTCCACAGTC TGAAGGAGAT 
CAGGAGGATC AACCCTGTCC TGATACTTCC TGTGAAAAAA ATGAAGATCA GGAGCCTTCC 
TCACCAAAAC AGGGAGAGTT CAGTGATCCG GTGTATAAAG AGATTGCATT GGCAAATGGT 
GCCATCAACC GAATGAACAG AGAAGAGTTG CGTGCGAAAT GCACAGAGCT GAAACTTGAC 
ACACGTGGAG TTAATGATGT CCTAAGGAAG CGCCTCAAAA GCTACTACAA AAAGCAGAAG 
TTGATGCATT CACCTGCTGC AGAAGGGAAC AGTGACATGT ACTTTGACTA CATCTGTGTG 
GTGGATTTTG AAGCAACATG CGAAGAGAAT AACCCACCAG ATTACCTCCA TGAAATCATT 
GAGTTCCCCA TGGTGTTGAT CGACACACAC ACACTGGAGA TTGTAGACTC GTTTCAGGAG 
TATGTGAAGC CAGTGCTGCA CCCACAGCTC TCTGAGTTTT GTGTAAAACT TACCGGAATA 
ACGCAGGAAA TGGTGGATGA GGCAAAAACA TTCCATCAAG TTTTAAAGCG AGCAATTTCT 
TGGCTTCAGG AAAAAGAACT GGGCACAAAA TACAAATATA TGTTTTTGAC AGACGGGTCT 
TGGGACATGG GGAAATTTCT TCATACACAG TGCAAACTGA GTCGCATCAG ATACCCACAG 
TTTGCCAGAA AATGGATCAA TATCAGAAAG TCTTATGGGA ATTTTTATAA GGTTCCTCGT 
ACTCAGACGA AGCTGATCTG CATGCTGGAG AATCTGGGGA TGGAGTATGA TGGACGTCCG 
CACTGTGGTC TAGATGACTC ACGCAACATT GCCAGAATCG CCATCCACAT GCTGAAGGAC 
GGCTGTCAGC TGAGGGTGAA TGAGTGCTTG CATTCAGGAG AACCGCGGAG CGTGCCTATC 
TCTGCCCCTA TTGAAGGAGC ACCAGCACCT CAGCCCCCCA AAAAACGAGA CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Treatment with small interfering RNA affects the microRNA pathway and causes unspecific defects in zebrafish embryos.
The FEBS journal275(9)2177-84(2008 May)
Zhao XF,Fjose A,Larsen N,Helvik JV,Drivenes ?

Functional analysis of human hematopoietic stem cell gene expression using zebrafish.
PLoS biology3(8)e254(2005 Aug)
Eckfeldt CE,Mendenhall EM,Flynn CM,Wang TF,Pickart MA,Grindle SM,Ekker SC,Verfaillie CM