cfap161 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	cfap161
Entrez Gene ID	550471
Full Name	cilia and flagella associated protein 161
Synonyms	C18H15orf26,zgc:110373
General protein information	Preferred Names cilia and flagella associated protein 161 Names cilia- and flagella-associated protein 161
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001017774.1	NP_001017774.1	cilia- and flagella-associated protein 161

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	C15H15orf26	XP_510544.3
Canis lupus familiaris (dog)	C3H15orf26	XP_852543.1
Bos taurus (cattle)	C21H15orf26	NP_001069004.1
Rattus norvegicus (Norway rat)	RGD1310371	NP_001094051.1
Drosophila melanogaster (fruit fly)	CG15498	NP_650974.1
Xenopus tropicalis (tropical clawed frog)	c15orf26	NP_001120035.1
Homo sapiens (human)	C15orf26	NP_775799.2
Gallus gallus (chicken)	C10H15ORF26	XP_413847.1
Drosophila melanogaster (fruit fly)	CG34457	NP_001097339.1
	C7H15orf26	XP_001109901.1
Mus musculus (house mouse)	1700026D08Rik	NP_083611.2
Danio rerio (zebrafish)	zgc:110373	NP_001017774.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Systematic discovery of novel ciliary genes through functional genomics in the zebrafish.
Choksi SP, Babu D, Lau D, Yu X, Roy S
Development (Cambridge, England)141(17)3410-9(2014 Sep)

Zebrafish Ciliopathy Screen Plus Human Mutational Analysis Identifies C21orf59 and CCDC65 Defects as Causing Primary Ciliary Dyskinesia.
Austin-Tse C, Halbritter J, Zariwala MA, Gilberti RM, Gee HY, Hellman N, Pathak N, Liu Y, Panizzi JR, Patel-King RS, Tritschler D, Bower R, O'Toole E, Porath JD, Hurd TW, Chaki M, Diaz KA, Kohl S, Lovric S, Hwang DY, Braun DA, Schueler M, Airik R, Otto EA, Leigh MW, Noone PG, Carson JL, Davis SD, Pittman JE, Ferkol TW, Atkinson JJ, Olivier KN, Sagel SD, Dell SD, Rosenfeld M, Milla CE, Loges NT, Omran H, Porter ME, King SM, Knowles MR, Drummond IA, Hildebrandt F
American journal of human genetics93(4)672-86(2013 Oct)

Mutation in utp15 disrupts vascular patterning in a p53-dependent manner in zebrafish embryos.
Mouillesseaux K, Chen JN
PloS one6(9)e25013(2011)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cfap161 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cfap161 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa01303	NM_001017774.1 Latest version!	Danio rerio cilia and flagella associated protein 161 (cfap161), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cfap161 ( NM_001017774.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001017774.1 Danio rerio cilia and flagella associated protein 161 (cfap161), mRNA.

Price & Availability↑

CloneID	ODa01303
Clone ID Related Accession (Same CDS sequence)	NM_001017774.1
Accession Version	NM_001017774.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-19
Organism	Danio rerio(zebrafish)
Product	cilia- and flagella-associated protein 161
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092905.1. ##Evidence-Data-START## Transcript exon combination :: BC092905.1, EE314608.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCTCACG TTCGGACCTA CAACCCGCGC GTTCGTGTGG GAAACTGGAA AGAAGACGTG 
ACTTTAGAAG AGGAAACCTC AAAGGAGTTT ATTCTGCAAA AAGACAGAGG CGAACTCACT 
GTACAGAAGG AAGGAGCGTT GAAACAAAGC ATTCTGAAAC CGGTGAGTTT ATCCGTATCT 
CAGGATGGTT TTTTACACTT TGGGGACACA GTAATGCTGG TGAACTGTGG AGATGGAGGT 
CACATGCAGC GGAGCCCCTG TGTCCTCAGC ATCATTGCGG ACAGCAGTAA TGTCACATCG 
CATTCACAGA CAAACACAGG CCCTCACCTT CTCGGGCCCC TACAAGTGGG AGGAGCCCAT 
AGCATGGACC CTTGTGTTAG AAACACTTTC ATCATTATAA GTGTTGATGG GAGCTCAGAT 
GGAGAAGTGG TCAGATATGA TCAAAGTTTT GCCCTGAAAA CCACTGGAGG CTTTGCTGGA 
GAGCTGTTTC TTGCCAGTGA TCACAAGTCA TTTCAGAAGT GTGCTAAGAA GTCTCGACTG 
CAGGAGCTGA GTTTAGTAGA GGAGTTTGAT TTCCTGTGCT GGTGGAAGGT GCTCTATTTC 
GACCCACAAG ATAGGCTTGA GAATGAGGGA TACCCGGTTC AGGTGAACAA CAAGGTTTTG 
ATTTCCCACT GTAAGACCAA TCAATGTCTG GCTGCACTGA GCAATCACAT CCTATGGTCT 
CAGTTCGGTA AAGAGTATGA ACTCACCGCT CACACTTTCC TGGACTCTCA TAAGGCAGAG 
CAGGACAATA ATCATTGGCT GTTCTCCACC GCTCATCCAG CCAATCAGAG TCAAAGCCTC 
CTTCAACTAC AGCAAGAGGA GCACAAAGAA AACCAGGAGG ACACACAAGT AAAGGATTGC 
AGTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001017774.1
CDS	144..1049
Translation	MAHVRTYNPRVRVGNWKEDVTLEEETSKEFILQKDRGELTVQKEGALKQSILKPVSLSVSQDGFLHFGDTVMLVNCGDGGHMQRSPCVLSIIADSSNVTSHSQTNTGPHLLGPLQVGGAHSMDPCVRNTFIIISVDGSSDGEVVRYDQSFALKTTGGFAGELFLASDHKSFQKCAKKSRLQELSLVEEFDFLCWWKVLYFDPQDRLENEGYPVQVNNKVLISHCKTNQCLAALSNHILWSQFGKEYELTAHTFLDSHKAEQDNNHWLFSTAHPANQSQSLLQLQQEEHKENQEDTQVKDCS

Target ORF information:

RefSeq Version	NM_001017774.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio cilia and flagella associated protein 161 (cfap161), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001017774.1

ORF Insert Sequence:

ATGGCTCACG TTCGGACCTA CAACCCGCGC GTTCGTGTGG GAAACTGGAA AGAAGACGTG 
ACTTTAGAAG AGGAAACCTC AAAGGAGTTT ATTCTGCAAA AAGACAGAGG CGAACTCACT 
GTACAGAAGG AAGGAGCGTT GAAACAAAGC ATTCTGAAAC CGGTGAGTTT ATCCGTATCT 
CAGGATGGTT TTTTACACTT TGGGGACACA GTAATGCTGG TGAACTGTGG AGATGGAGGT 
CACATGCAGC GGAGCCCCTG TGTCCTCAGC ATCATTGCGG ACAGCAGTAA TGTCACATCG 
CATTCACAGA CAAACACAGG CCCTCACCTT CTCGGGCCCC TACAAGTGGG AGGAGCCCAT 
AGCATGGACC CTTGTGTTAG AAACACTTTC ATCATTATAA GTGTTGATGG GAGCTCAGAT 
GGAGAAGTGG TCAGATATGA TCAAAGTTTT GCCCTGAAAA CCACTGGAGG CTTTGCTGGA 
GAGCTGTTTC TTGCCAGTGA TCACAAGTCA TTTCAGAAGT GTGCTAAGAA GTCTCGACTG 
CAGGAGCTGA GTTTAGTAGA GGAGTTTGAT TTCCTGTGCT GGTGGAAGGT GCTCTATTTC 
GACCCACAAG ATAGGCTTGA GAATGAGGGA TACCCGGTTC AGGTGAACAA CAAGGTTTTG 
ATTTCCCACT GTAAGACCAA TCAATGTCTG GCTGCACTGA GCAATCACAT CCTATGGTCT 
CAGTTCGGTA AAGAGTATGA ACTCACCGCT CACACTTTCC TGGACTCTCA TAAGGCAGAG 
CAGGACAATA ATCATTGGCT GTTCTCCACC GCTCATCCAG CCAATCAGAG TCAAAGCCTC 
CTTCAACTAC AGCAAGAGGA GCACAAAGAA AACCAGGAGG ACACACAAGT AAAGGATTGC 
AGTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Systematic discovery of novel ciliary genes through functional genomics in the zebrafish.
Development (Cambridge, England)141(17)3410-9(2014 Sep)
Choksi SP,Babu D,Lau D,Yu X,Roy S

Zebrafish Ciliopathy Screen Plus Human Mutational Analysis Identifies C21orf59 and CCDC65 Defects as Causing Primary Ciliary Dyskinesia.
American journal of human genetics93(4)672-86(2013 Oct)
Austin-Tse C,Halbritter J,Zariwala MA,Gilberti RM,Gee HY,Hellman N,Pathak N,Liu Y,Panizzi JR,Patel-King RS,Tritschler D,Bower R,O'Toole E,Porath JD,Hurd TW,Chaki M,Diaz KA,Kohl S,Lovric S,Hwang DY,Braun DA,Schueler M,Airik R,Otto EA,Leigh MW,Noone PG,Carson JL,Davis SD,Pittman JE,Ferkol TW,Atkinson JJ,Olivier KN,Sagel SD,Dell SD,Rosenfeld M,Milla CE,Loges NT,Omran H,Porter ME,King SM,Knowles MR,Drummond IA,Hildebrandt F

Mutation in utp15 disrupts vascular patterning in a p53-dependent manner in zebrafish embryos.
PloS one6(9)e25013(2011)
Mouillesseaux K,Chen JN