atg5 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	atg5
Entrez Gene ID	494180
Full Name	ATG5 autophagy related 5 homolog (S. cerevisiae)
Synonyms	apg5l,zgc:100934
General protein information	Preferred Names ATG5 autophagy related 5 homolog (S. cerevisiae) Names autophagy protein 5 autophagy 5-like protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_205618.2	NP_991181.2	autophagy protein 5
NM_001009914.2	NP_001009914.2	autophagy protein 5

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	ATG5	NP_001006409.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP010939	XP_309756.4
Arabidopsis thaliana (thale cress)	APG5	NP_197231.1
Oryza sativa (rice)	Os02g0117800	NP_001045690.1
Xenopus tropicalis (tropical clawed frog)	atg5	NP_001016445.1
Pan troglodytes (chimpanzee)	ATG5	XP_518659.1
Canis lupus familiaris (dog)	ATG5	XP_854294.1
Homo sapiens (human)	ATG5	NP_001273035.1
Drosophila melanogaster (fruit fly)	Atg5	NP_572390.1
	ATG5	XP_001088076.1
Bos taurus (cattle)	ATG5	NP_001029751.2
Mus musculus (house mouse)	Atg5	NP_444299.1
Danio rerio (zebrafish)	atg5	NP_001009914.2
Caenorhabditis elegans (roundworm)	atg-5	NP_490885.3

Gene Ontology

The following atg5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the atg5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa01506	NM_001009914.2 Latest version!	Danio rerio ATG5 autophagy related 5 homolog (S. cerevisiae) (atg5), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa01506	NM_205618.2 Latest version!	Danio rerio ATG5 autophagy related 5 homolog (S. cerevisiae) (atg5), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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5 or more Clone	50% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

atg5 ( NM_205618.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_991181.2 Danio rerio ATG5 autophagy related 5 homolog (S. cerevisiae) (atg5), transcript variant 2, mRNA.

Price & Availability↑

CloneID	ODa01506
Clone ID Related Accession (Same CDS sequence)	NM_205618.2 , NM_001009914.2
Accession Version	NM_205618.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 828bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-12
Organism	Danio rerio(zebrafish)
Product	autophagy protein 5
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL928573.14. On Jun 7, 2012 this sequence version replaced NM_205618.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: GDQH01014516.1, AY398310.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGATAATGG CAGATGACAA GGATGTGCTT CGAGATGTTT GGTTTGGAAG GATACCCGCC 
TGTTTCACAC TGTCTCCAGA CGAAACCACA GAGAGAGAGG CAGAACCCTA CTATCTGCTC 
CTCCCACGGG TCAGTTACCT GACACTAGTC ACTGATAAAG TCAAGAAACA TTTTCTCAAA 
GTCATGAAGG CAGAGGATGT GGAGGAAATG TGGTTTGAAC ACGAGGGAAC GCCTCTTAAA 
TGGCACTATC CCATTGGTGT GTTGTTCGAC CTCCATGCTT CAAACTCCGC TCTGCCCTGG 
AATATCACAG TGCACTTCAA GAACTTCCCA GAACAAGACT TGCTTCACTG CTCAACAAAC 
TCTGTGATAG AAGCACATTT CATGTCTTGC ATTAAAGAGG CCGATGCACT CAAACATAAA 
GGCCAGGTCA TCAACGATAT GCAGAAGAAA GACCATAAAC AACTGTGGAT GGGTCTGCAG 
AATGATAAAT TTGACCAGTT CTGGGCCATG AATCGCAAAC TCATGGAGTA TCCCACCGAA 
GAGGGAGGCT TTCGGTATAT CCCCTTTAGA ATATATCAGA CTATGAGTGA CAGACCATTC 
ATCCAGACGC TCTTCCGACC AGTGTCTTCT GAAGGCCAAG CGCTTACACT GGGAGACCTG 
CTGAAGGAGC TGTTTCCTGC TGCCATTGAG GATGAGCCAA AGAAATTCCA GGTTATGATT 
CACGGCATTG AACCCCTGCT AGAGACGCCC ATCCAGTGGC TAAGTGAACA CTTGAGCCAC 
CCCGACAACT TTCTCCACAT CAGCATCATC CCTGCACCGA GTGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_991181.2
CDS	132..959
Translation	MIMADDKDVLRDVWFGRIPACFTLSPDETTEREAEPYYLLLPRVSYLTLVTDKVKKHFLKVMKAEDVEEMWFEHEGTPLKWHYPIGVLFDLHASNSALPWNITVHFKNFPEQDLLHCSTNSVIEAHFMSCIKEADALKHKGQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEGGFRYIPFRIYQTMSDRPFIQTLFRPVSSEGQALTLGDLLKELFPAAIEDEPKKFQVMIHGIEPLLETPIQWLSEHLSHPDNFLHISIIPAPSD

Target ORF information:

RefSeq Version	NM_205618.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ATG5 autophagy related 5 homolog (S. cerevisiae) (atg5), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_205618.2

ORF Insert Sequence:

ATGATAATGG CAGATGACAA GGATGTGCTT CGAGATGTTT GGTTTGGAAG GATACCCGCC 
TGTTTCACAC TGTCTCCAGA CGAAACCACA GAGAGAGAGG CAGAACCCTA CTATCTGCTC 
CTCCCACGGG TCAGTTACCT GACACTAGTC ACTGATAAAG TCAAGAAACA TTTTCTCAAA 
GTCATGAAGG CAGAGGATGT GGAGGAAATG TGGTTTGAAC ACGAGGGAAC GCCTCTTAAA 
TGGCACTATC CCATTGGTGT GTTGTTCGAC CTCCATGCTT CAAACTCCGC TCTGCCCTGG 
AATATCACAG TGCACTTCAA GAACTTCCCA GAACAAGACT TGCTTCACTG CTCAACAAAC 
TCTGTGATAG AAGCACATTT CATGTCTTGC ATTAAAGAGG CCGATGCACT CAAACATAAA 
GGCCAGGTCA TCAACGATAT GCAGAAGAAA GACCATAAAC AACTGTGGAT GGGTCTGCAG 
AATGATAAAT TTGACCAGTT CTGGGCCATG AATCGCAAAC TCATGGAGTA TCCCACCGAA 
GAGGGAGGCT TTCGGTATAT CCCCTTTAGA ATATATCAGA CTATGAGTGA CAGACCATTC 
ATCCAGACGC TCTTCCGACC AGTGTCTTCT GAAGGCCAAG CGCTTACACT GGGAGACCTG 
CTGAAGGAGC TGTTTCCTGC TGCCATTGAG GATGAGCCAA AGAAATTCCA GGTTATGATT 
CACGGCATTG AACCCCTGCT AGAGACGCCC ATCCAGTGGC TAAGTGAACA CTTGAGCCAC 
CCCGACAACT TTCTCCACAT CAGCATCATC CCTGCACCGA GTGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

atg5 ( NM_001009914.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001009914.2 Danio rerio ATG5 autophagy related 5 homolog (S. cerevisiae) (atg5), transcript variant 1, mRNA.

Price & Availability↑

CloneID	ODa01506
Clone ID Related Accession (Same CDS sequence)	NM_205618.2 , NM_001009914.2
Accession Version	NM_001009914.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 828bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-12
Organism	Danio rerio(zebrafish)
Product	autophagy protein 5
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL928573.14. On Jun 7, 2012 this sequence version replaced NM_001009914.1. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC077086.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGATAATGG CAGATGACAA GGATGTGCTT CGAGATGTTT GGTTTGGAAG GATACCCGCC 
TGTTTCACAC TGTCTCCAGA CGAAACCACA GAGAGAGAGG CAGAACCCTA CTATCTGCTC 
CTCCCACGGG TCAGTTACCT GACACTAGTC ACTGATAAAG TCAAGAAACA TTTTCTCAAA 
GTCATGAAGG CAGAGGATGT GGAGGAAATG TGGTTTGAAC ACGAGGGAAC GCCTCTTAAA 
TGGCACTATC CCATTGGTGT GTTGTTCGAC CTCCATGCTT CAAACTCCGC TCTGCCCTGG 
AATATCACAG TGCACTTCAA GAACTTCCCA GAACAAGACT TGCTTCACTG CTCAACAAAC 
TCTGTGATAG AAGCACATTT CATGTCTTGC ATTAAAGAGG CCGATGCACT CAAACATAAA 
GGCCAGGTCA TCAACGATAT GCAGAAGAAA GACCATAAAC AACTGTGGAT GGGTCTGCAG 
AATGATAAAT TTGACCAGTT CTGGGCCATG AATCGCAAAC TCATGGAGTA TCCCACCGAA 
GAGGGAGGCT TTCGGTATAT CCCCTTTAGA ATATATCAGA CTATGAGTGA CAGACCATTC 
ATCCAGACGC TCTTCCGACC AGTGTCTTCT GAAGGCCAAG CGCTTACACT GGGAGACCTG 
CTGAAGGAGC TGTTTCCTGC TGCCATTGAG GATGAGCCAA AGAAATTCCA GGTTATGATT 
CACGGCATTG AACCCCTGCT AGAGACGCCC ATCCAGTGGC TAAGTGAACA CTTGAGCCAC 
CCCGACAACT TTCTCCACAT CAGCATCATC CCTGCACCGA GTGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001009914.2
CDS	185..1012
Translation	MIMADDKDVLRDVWFGRIPACFTLSPDETTEREAEPYYLLLPRVSYLTLVTDKVKKHFLKVMKAEDVEEMWFEHEGTPLKWHYPIGVLFDLHASNSALPWNITVHFKNFPEQDLLHCSTNSVIEAHFMSCIKEADALKHKGQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEGGFRYIPFRIYQTMSDRPFIQTLFRPVSSEGQALTLGDLLKELFPAAIEDEPKKFQVMIHGIEPLLETPIQWLSEHLSHPDNFLHISIIPAPSD

Target ORF information:

RefSeq Version	NM_001009914.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ATG5 autophagy related 5 homolog (S. cerevisiae) (atg5), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001009914.2

ORF Insert Sequence:

ATGATAATGG CAGATGACAA GGATGTGCTT CGAGATGTTT GGTTTGGAAG GATACCCGCC 
TGTTTCACAC TGTCTCCAGA CGAAACCACA GAGAGAGAGG CAGAACCCTA CTATCTGCTC 
CTCCCACGGG TCAGTTACCT GACACTAGTC ACTGATAAAG TCAAGAAACA TTTTCTCAAA 
GTCATGAAGG CAGAGGATGT GGAGGAAATG TGGTTTGAAC ACGAGGGAAC GCCTCTTAAA 
TGGCACTATC CCATTGGTGT GTTGTTCGAC CTCCATGCTT CAAACTCCGC TCTGCCCTGG 
AATATCACAG TGCACTTCAA GAACTTCCCA GAACAAGACT TGCTTCACTG CTCAACAAAC 
TCTGTGATAG AAGCACATTT CATGTCTTGC ATTAAAGAGG CCGATGCACT CAAACATAAA 
GGCCAGGTCA TCAACGATAT GCAGAAGAAA GACCATAAAC AACTGTGGAT GGGTCTGCAG 
AATGATAAAT TTGACCAGTT CTGGGCCATG AATCGCAAAC TCATGGAGTA TCCCACCGAA 
GAGGGAGGCT TTCGGTATAT CCCCTTTAGA ATATATCAGA CTATGAGTGA CAGACCATTC 
ATCCAGACGC TCTTCCGACC AGTGTCTTCT GAAGGCCAAG CGCTTACACT GGGAGACCTG 
CTGAAGGAGC TGTTTCCTGC TGCCATTGAG GATGAGCCAA AGAAATTCCA GGTTATGATT 
CACGGCATTG AACCCCTGCT AGAGACGCCC ATCCAGTGGC TAAGTGAACA CTTGAGCCAC 
CCCGACAACT TTCTCCACAT CAGCATCATC CCTGCACCGA GTGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.