calua cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	calua
Entrez Gene ID	415241
Full Name	calumenin a
Synonyms	calu,wu:fd50c05,zgc:86677
General protein information	Preferred Names calumenin a Names calumenin-A
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001317392.1	NP_001304321.1	calumenin-A precursor
NM_001002151.2	NP_001002151.2	calumenin-A precursor

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	CALU	NP_001233521.1
Danio rerio (zebrafish)	calua	NP_001002151.1
Homo sapiens (human)	CALU	NP_001186600.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP010392	XP_311555.3
Bos taurus (cattle)	CALU	NP_001029837.1
Drosophila melanogaster (fruit fly)	scf	NP_477392.1
Mus musculus (house mouse)	Calu	NP_908942.1
Rattus norvegicus (Norway rat)	Calu	NP_001029070.1
	CALU	XP_001091525.2
Canis lupus familiaris (dog)	CALU	XP_858778.1
Caenorhabditis elegans (roundworm)	calu-1	NP_001024806.1
Xenopus tropicalis (tropical clawed frog)	calu	NP_998840.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Zebrafish vitamin K epoxide reductases: expression in vivo, along extracellular matrix mineralization and under phylloquinone and warfarin in vitro exposure.
Fern?ndez I, Vijayakumar P, Marques C, Cancela ML, Gavaia PJ, Laiz? V
Fish physiology and biochemistry41(3)745-59(2015 Jun)

The evolutionary fate of alternatively spliced homologous exons after gene duplication.
Abascal F, Tress ML, Valencia A
Genome biology and evolution7(6)1392-403(2015 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following calua gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the calua cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa09241	NM_001317392.1 Latest version!	Danio rerio calumenin a (calua), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa09241	NM_001002151.2 Latest version!	Danio rerio calumenin a (calua), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

calua ( NM_001317392.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001304321.1 Danio rerio calumenin a (calua), transcript variant 2, mRNA.

Price & Availability↑

CloneID	ODa09241
Clone ID Related Accession (Same CDS sequence)	NM_001317392.1 , NM_001002151.2
Accession Version	NM_001317392.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 954bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-29
Organism	Danio rerio(zebrafish)
Product	calumenin-A precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX465210.7, EH588521.1, EH487264.1, EH601661.1 and EH531239.1. On Dec 3, 2015 this sequence version replaced XM_005164622.2. Transcript Variant: This variant (2) uses an alternate splice acceptor site in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01005826.1, GDQQ01000701.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGAAGATGG AAATTAGGCC TTTGTTGATG TGCTTTGCTC TGTGCGTGGT TTACGCCACC 
AGCAAACCAA CAGAGAAGAA AGACAGGGTC CACCATGATG CACCCCTGAG CAGCAAAGAG 
CATGACGATG GCACAAACTT TGAATACGAC CACGATGCCT TCCTTGGAGA AGAAGAAGCC 
AAAACATTTG ATGATCTGAC TCCGGAAGAA AGCAAAAATA GGCTTGGTAA AATTGTGGAA 
AAGATTGATG CAGATGAGGA TGGTTTTGTG ACAGAGGCCG AGCTGAAAGC ATGGATCAAA 
AAGGCTCAAA AGAAATACAT TTATGACAAT GTGGAGAGAC AATGGAAGGA TTTTGATCTG 
AACAACGATA GAATGATCTC CTGGGAAGAA TACAAGAACG TCACCTATGG CACCTACCTT 
GATGATCCTG AACCTGATGA TGGCTATAAC TACAAACAGA TGATGGCCAG AGATGAACGC 
CGCTTTAAAA TGGCTGATGG GAATGGAGAC CACATCGCTG ATAAAGAGGA GTTCACGGCT 
TTCCTCCATC CTGAGGAGTA TGAACATATG AAGGACATTG TTGTGCTGGA AACAATGGAG 
GACATTGACA AGAATGGTGA TGGGTTTATT GATTTGGAGG AGTATATTGG TGACATGTAC 
AACCATGAGG ATGAAATGGA CGAGCCGGAG TGGGTGGCGA CAGAGCGAGA GCAGTTTTCG 
GAGTTCAGAG ACAAGAACAA GGATGGCAAA ATGGACAGGG AAGAAACCAT GGACTGGATC 
CTACCAGCCG ACTACGATCA CGCTGAAGCC GAAGCGAAGC ATCTGGTGTA TGAGTCTGAC 
ACAAACAAGG ATGGAAAGCT GACCAAAGAA GAAATACTCA ACAAGTATGA TTTGTTTGTG 
GGAAGCCAAG CGACTGACTT CGGGGAGGCA TTAGTTCGAC ATGATGAGTT TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001304321.1
CDS	153..1106
Translation	MKMEIRPLLMCFALCVVYATSKPTEKKDRVHHDAPLSSKEHDDGTNFEYDHDAFLGEEEAKTFDDLTPEESKNRLGKIVEKIDADEDGFVTEAELKAWIKKAQKKYIYDNVERQWKDFDLNNDRMISWEEYKNVTYGTYLDDPEPDDGYNYKQMMARDERRFKMADGNGDHIADKEEFTAFLHPEEYEHMKDIVVLETMEDIDKNGDGFIDLEEYIGDMYNHEDEMDEPEWVATEREQFSEFRDKNKDGKMDREETMDWILPADYDHAEAEAKHLVYESDTNKDGKLTKEEILNKYDLFVGSQATDFGEALVRHDEF

Target ORF information:

RefSeq Version	NM_001317392.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio calumenin a (calua), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001317392.1

ORF Insert Sequence:

ATGAAGATGG AAATTAGGCC TTTGTTGATG TGCTTTGCTC TGTGCGTGGT TTACGCCACC 
AGCAAACCAA CAGAGAAGAA AGACAGGGTC CACCATGATG CACCCCTGAG CAGCAAAGAG 
CATGACGATG GCACAAACTT TGAATACGAC CACGATGCCT TCCTTGGAGA AGAAGAAGCC 
AAAACATTTG ATGATCTGAC TCCGGAAGAA AGCAAAAATA GGCTTGGTAA AATTGTGGAA 
AAGATTGATG CAGATGAGGA TGGTTTTGTG ACAGAGGCCG AGCTGAAAGC ATGGATCAAA 
AAGGCTCAAA AGAAATACAT TTATGACAAT GTGGAGAGAC AATGGAAGGA TTTTGATCTG 
AACAACGATA GAATGATCTC CTGGGAAGAA TACAAGAACG TCACCTATGG CACCTACCTT 
GATGATCCTG AACCTGATGA TGGCTATAAC TACAAACAGA TGATGGCCAG AGATGAACGC 
CGCTTTAAAA TGGCTGATGG GAATGGAGAC CACATCGCTG ATAAAGAGGA GTTCACGGCT 
TTCCTCCATC CTGAGGAGTA TGAACATATG AAGGACATTG TTGTGCTGGA AACAATGGAG 
GACATTGACA AGAATGGTGA TGGGTTTATT GATTTGGAGG AGTATATTGG TGACATGTAC 
AACCATGAGG ATGAAATGGA CGAGCCGGAG TGGGTGGCGA CAGAGCGAGA GCAGTTTTCG 
GAGTTCAGAG ACAAGAACAA GGATGGCAAA ATGGACAGGG AAGAAACCAT GGACTGGATC 
CTACCAGCCG ACTACGATCA CGCTGAAGCC GAAGCGAAGC ATCTGGTGTA TGAGTCTGAC 
ACAAACAAGG ATGGAAAGCT GACCAAAGAA GAAATACTCA ACAAGTATGA TTTGTTTGTG 
GGAAGCCAAG CGACTGACTT CGGGGAGGCA TTAGTTCGAC ATGATGAGTT TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

calua ( NM_001002151.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002151.2 Danio rerio calumenin a (calua), transcript variant 1, mRNA.

Price & Availability↑

CloneID	ODa09241
Clone ID Related Accession (Same CDS sequence)	NM_001317392.1 , NM_001002151.2
Accession Version	NM_001002151.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 954bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-29
Organism	Danio rerio(zebrafish)
Product	calumenin-A precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX465210.7, EH505062.1, EH487264.1, EH601661.1 and EH531239.1. On Dec 3, 2015 this sequence version replaced NM_001002151.1. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01002929.1, BC071361.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGAAGATGG AAATTAGGCC TTTGTTGATG TGCTTTGCTC TGTGCGTGGT TTACGCCACC 
AGCAAACCAA CAGAGAAGAA AGACAGGGTC CACCATGATG CACCCCTGAG CAGCAAAGAG 
CATGACGATG GCACAAACTT TGAATACGAC CACGATGCCT TCCTTGGAGA AGAAGAAGCC 
AAAACATTTG ATGATCTGAC TCCGGAAGAA AGCAAAAATA GGCTTGGTAA AATTGTGGAA 
AAGATTGATG CAGATGAGGA TGGTTTTGTG ACAGAGGCCG AGCTGAAAGC ATGGATCAAA 
AAGGCTCAAA AGAAATACAT TTATGACAAT GTGGAGAGAC AATGGAAGGA TTTTGATCTG 
AACAACGATA GAATGATCTC CTGGGAAGAA TACAAGAACG TCACCTATGG CACCTACCTT 
GATGATCCTG AACCTGATGA TGGCTATAAC TACAAACAGA TGATGGCCAG AGATGAACGC 
CGCTTTAAAA TGGCTGATGG GAATGGAGAC CACATCGCTG ATAAAGAGGA GTTCACGGCT 
TTCCTCCATC CTGAGGAGTA TGAACATATG AAGGACATTG TTGTGCTGGA AACAATGGAG 
GACATTGACA AGAATGGTGA TGGGTTTATT GATTTGGAGG AGTATATTGG TGACATGTAC 
AACCATGAGG ATGAAATGGA CGAGCCGGAG TGGGTGGCGA CAGAGCGAGA GCAGTTTTCG 
GAGTTCAGAG ACAAGAACAA GGATGGCAAA ATGGACAGGG AAGAAACCAT GGACTGGATC 
CTACCAGCCG ACTACGATCA CGCTGAAGCC GAAGCGAAGC ATCTGGTGTA TGAGTCTGAC 
ACAAACAAGG ATGGAAAGCT GACCAAAGAA GAAATACTCA ACAAGTATGA TTTGTTTGTG 
GGAAGCCAAG CGACTGACTT CGGGGAGGCA TTAGTTCGAC ATGATGAGTT TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002151.2
CDS	163..1116
Translation	MKMEIRPLLMCFALCVVYATSKPTEKKDRVHHDAPLSSKEHDDGTNFEYDHDAFLGEEEAKTFDDLTPEESKNRLGKIVEKIDADEDGFVTEAELKAWIKKAQKKYIYDNVERQWKDFDLNNDRMISWEEYKNVTYGTYLDDPEPDDGYNYKQMMARDERRFKMADGNGDHIADKEEFTAFLHPEEYEHMKDIVVLETMEDIDKNGDGFIDLEEYIGDMYNHEDEMDEPEWVATEREQFSEFRDKNKDGKMDREETMDWILPADYDHAEAEAKHLVYESDTNKDGKLTKEEILNKYDLFVGSQATDFGEALVRHDEF

Target ORF information:

RefSeq Version	NM_001002151.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio calumenin a (calua), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002151.2

ORF Insert Sequence:

ATGAAGATGG AAATTAGGCC TTTGTTGATG TGCTTTGCTC TGTGCGTGGT TTACGCCACC 
AGCAAACCAA CAGAGAAGAA AGACAGGGTC CACCATGATG CACCCCTGAG CAGCAAAGAG 
CATGACGATG GCACAAACTT TGAATACGAC CACGATGCCT TCCTTGGAGA AGAAGAAGCC 
AAAACATTTG ATGATCTGAC TCCGGAAGAA AGCAAAAATA GGCTTGGTAA AATTGTGGAA 
AAGATTGATG CAGATGAGGA TGGTTTTGTG ACAGAGGCCG AGCTGAAAGC ATGGATCAAA 
AAGGCTCAAA AGAAATACAT TTATGACAAT GTGGAGAGAC AATGGAAGGA TTTTGATCTG 
AACAACGATA GAATGATCTC CTGGGAAGAA TACAAGAACG TCACCTATGG CACCTACCTT 
GATGATCCTG AACCTGATGA TGGCTATAAC TACAAACAGA TGATGGCCAG AGATGAACGC 
CGCTTTAAAA TGGCTGATGG GAATGGAGAC CACATCGCTG ATAAAGAGGA GTTCACGGCT 
TTCCTCCATC CTGAGGAGTA TGAACATATG AAGGACATTG TTGTGCTGGA AACAATGGAG 
GACATTGACA AGAATGGTGA TGGGTTTATT GATTTGGAGG AGTATATTGG TGACATGTAC 
AACCATGAGG ATGAAATGGA CGAGCCGGAG TGGGTGGCGA CAGAGCGAGA GCAGTTTTCG 
GAGTTCAGAG ACAAGAACAA GGATGGCAAA ATGGACAGGG AAGAAACCAT GGACTGGATC 
CTACCAGCCG ACTACGATCA CGCTGAAGCC GAAGCGAAGC ATCTGGTGTA TGAGTCTGAC 
ACAAACAAGG ATGGAAAGCT GACCAAAGAA GAAATACTCA ACAAGTATGA TTTGTTTGTG 
GGAAGCCAAG CGACTGACTT CGGGGAGGCA TTAGTTCGAC ATGATGAGTT TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Zebrafish vitamin K epoxide reductases: expression in vivo, along extracellular matrix mineralization and under phylloquinone and warfarin in vitro exposure.
Fish physiology and biochemistry41(3)745-59(2015 Jun)
Fern?ndez I,Vijayakumar P,Marques C,Cancela ML,Gavaia PJ,Laiz? V

The evolutionary fate of alternatively spliced homologous exons after gene duplication.
Genome biology and evolution7(6)1392-403(2015 Apr)
Abascal F,Tress ML,Valencia A