phf10 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	phf10
Entrez Gene ID	393628
Full Name	PHD finger protein 10
Synonyms	XAP135,zgc:66233,zgc:85788
General protein information	Preferred Names PHD finger protein 10 Names PHD finger protein 10
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200655.3	NP_956949.3	PHD finger protein 10

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	PHF10	XP_518861.3
Caenorhabditis elegans (roundworm)	phf-10	NP_001041113.1
Homo sapiens (human)	PHF10	NP_060758.2
Bos taurus (cattle)	PHF10	NP_001033141.1
Xenopus tropicalis (tropical clawed frog)	phf10	NP_001025643.1
Mus musculus (house mouse)	Phf10	NP_077212.3
Rattus norvegicus (Norway rat)	Phf10	NP_001019918.1
	PHF10	XP_001084064.2
Gallus gallus (chicken)	PHF10	XP_003641005.2
Canis lupus familiaris (dog)	PHF10	XP_005627785.1
Danio rerio (zebrafish)	phf10	NP_956949.3

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

A network of epigenetic regulators guides developmental haematopoiesis in vivo.
Huang HT, Kathrein KL, Barton A, Gitlin Z, Huang YH, Ward TP, Hofmann O, Dibiase A, Song A, Tyekucheva S, Hide W, Zhou Y, Zon LI
Nature cell biology15(12)1516-25(2013 Dec)

Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)

Comparative analysis of the PDCD2-TBP-PSMB1 region in vertebrates.
Trachtulec Z, Vlcek C, Mihola O, Forejt J
Gene335151-7(2004 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following phf10 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the phf10 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa39085	NM_200655.3 Latest version!	Danio rerio PHD finger protein 10 (phf10), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

phf10 ( NM_200655.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956949.3 Danio rerio PHD finger protein 10 (phf10), mRNA.

Price & Availability↑

CloneID	ODa39085
Clone ID Related Accession (Same CDS sequence)	NM_200655.3
Accession Version	NM_200655.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	PHD finger protein 10
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH455901.1, BX629343.11 and EH481640.1. On Sep 27, 2011 this sequence version replaced NM_200655.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AY398397.1, BC154301.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCAGCTG TTCTATCGCC GAGACCGTGC GATAGCAATC CTGCAACTCC TGGGACCCAG 
TCTATAAAGG ATGACATTGA GGAGAACTCC AGTGATGGGA GTCAAGCCCC CAAGAGGCGC 
AGGATGGGCT CAGGAGACAG TTCCAGGAGC TGTGACACTT CCACCCATGA GCTCGGACCA 
ACATACTTCC CTGCTGAAAA CCTGACAGAA TACAAATGGC CTCCGGATGA CACGGGAGAG 
TATTATATGT TACAAGAACA AGTGAGCGAG TACTTGGGAG TCACGTCATT CAAGCGCAAA 
TACCCAGAAA TGGAAAGAAG AGACCTGTCT CACAAGGAAA AACTTTATCT GAGAGAGCAG 
AATGTCATTA CTGAAACACA GTGTACATTG GGTCTCACAG CTCTGCGCAG TGATGAAGTT 
ATCGATTTAA TGATTAAAGA GTATCCAGCC AAACATGCTG AATATTCAGT CATTCTCCAG 
GAGCGAGAGC GGCAGAGGAT AACTAAAGAG TACAACGTCA GCACTCTTAG TGTACAAATG 
CAGCAACAGA ATCCTCAGAA AGTTGAAGCC AGCAAAGTGC CAGAATACAT CAAGAAAGCT 
GCTAAAAAAG CGGCTGAATT CAACAGTAAT TTCAACCGAG AGCGGATGGA GGAGAGAAGG 
GCTTATTTTG ACCTTCAGAC ACATATTATT CAGGTACCTC AGGGAAAATA TAAAATCCTC 
CCACCGGAAA GAACCAAGAC CGGTCCGTTC CCTGTTGCCC TCATTCCCGG CCAGTTCCAG 
GAGTACTACA AAAGGTACTC TCCTAACGAG CTCCGCTACT TGCCCTTAAA CACAGCCCTC 
TTTGAGCCTC CACTGGACCC AGAGCTGCCG GCCCTGGACA GTGATGGAGA CTCTGATGAT 
GGTGACGATG GAAAAGAAGA TGGCAAGAAA AATAAGGGTT CCTCCGACAG TTCATCAGGA 
AACACCTCAG ATGGAGACAG CCAAGACAGC GGCATTCACT CCAAAGTCAA GAGCAAAGAC 
CGACCTGGCG CCCAGAGCAA AGACGGCACT CCTCGCTCCA TCCAACACAA ATCTGTCCCT 
GGGTACAAGC CTAAGGTCAT TCCCAATGCT ATATGTGGCA TATGTCAGAA GGGTAAGGAG 
GCCAACAAGC GAGGCAAACC AGAGGCTCTC ATCCACTGCT CCCAGTGCCA AAACAGCGGT 
CACCCGTCCT GCTTGGACAT GAGTGTGGAT CTGGTGGCCA AGATCAAGAT GTACCCGTGG 
CAGTGTATGG AGTGTAAGAC GTGCACCGTG TGTCAGCAGC CCCATCATGA GGAGGAGATG 
ATGTTCTGTG ATAAGTGTGA TCGAGGCTTT CACACTTTCT GTGTGGGCAT GGACTCCATT 
CCTATGGGTT GCTGGGTCTG CGATTTATGC AGCAAAGACA TTTCAACACC TCAGAAGAAA 
GGACAAACAA AAACACCAAA AAAGGCCAAA TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956949.3
CDS	18..1490
Translation	MAAVLSPRPCDSNPATPGTQSIKDDIEENSSDGSQAPKRRRMGSGDSSRSCDTSTHELGPTYFPAENLTEYKWPPDDTGEYYMLQEQVSEYLGVTSFKRKYPEMERRDLSHKEKLYLREQNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQERERQRITKEYNVSTLSVQMQQQNPQKVEASKVPEYIKKAAKKAAEFNSNFNRERMEERRAYFDLQTHIIQVPQGKYKILPPERTKTGPFPVALIPGQFQEYYKRYSPNELRYLPLNTALFEPPLDPELPALDSDGDSDDGDDGKEDGKKNKGSSDSSSGNTSDGDSQDSGIHSKVKSKDRPGAQSKDGTPRSIQHKSVPGYKPKVIPNAICGICQKGKEANKRGKPEALIHCSQCQNSGHPSCLDMSVDLVAKIKMYPWQCMECKTCTVCQQPHHEEEMMFCDKCDRGFHTFCVGMDSIPMGCWVCDLCSKDISTPQKKGQTKTPKKAK

Target ORF information:

RefSeq Version	NM_200655.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio PHD finger protein 10 (phf10), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200655.3

ORF Insert Sequence:

ATGGCAGCTG TTCTATCGCC GAGACCGTGC GATAGCAATC CTGCAACTCC TGGGACCCAG 
TCTATAAAGG ATGACATTGA GGAGAACTCC AGTGATGGGA GTCAAGCCCC CAAGAGGCGC 
AGGATGGGCT CAGGAGACAG TTCCAGGAGC TGTGACACTT CCACCCATGA GCTCGGACCA 
ACATACTTCC CTGCTGAAAA CCTGACAGAA TACAAATGGC CTCCGGATGA CACGGGAGAG 
TATTATATGT TACAAGAACA AGTGAGCGAG TACTTGGGAG TCACGTCATT CAAGCGCAAA 
TACCCAGAAA TGGAAAGAAG AGACCTGTCT CACAAGGAAA AACTTTATCT GAGAGAGCAG 
AATGTCATTA CTGAAACACA GTGTACATTG GGTCTCACAG CTCTGCGCAG TGATGAAGTT 
ATCGATTTAA TGATTAAAGA GTATCCAGCC AAACATGCTG AATATTCAGT CATTCTCCAG 
GAGCGAGAGC GGCAGAGGAT AACTAAAGAG TACAACGTCA GCACTCTTAG TGTACAAATG 
CAGCAACAGA ATCCTCAGAA AGTTGAAGCC AGCAAAGTGC CAGAATACAT CAAGAAAGCT 
GCTAAAAAAG CGGCTGAATT CAACAGTAAT TTCAACCGAG AGCGGATGGA GGAGAGAAGG 
GCTTATTTTG ACCTTCAGAC ACATATTATT CAGGTACCTC AGGGAAAATA TAAAATCCTC 
CCACCGGAAA GAACCAAGAC CGGTCCGTTC CCTGTTGCCC TCATTCCCGG CCAGTTCCAG 
GAGTACTACA AAAGGTACTC TCCTAACGAG CTCCGCTACT TGCCCTTAAA CACAGCCCTC 
TTTGAGCCTC CACTGGACCC AGAGCTGCCG GCCCTGGACA GTGATGGAGA CTCTGATGAT 
GGTGACGATG GAAAAGAAGA TGGCAAGAAA AATAAGGGTT CCTCCGACAG TTCATCAGGA 
AACACCTCAG ATGGAGACAG CCAAGACAGC GGCATTCACT CCAAAGTCAA GAGCAAAGAC 
CGACCTGGCG CCCAGAGCAA AGACGGCACT CCTCGCTCCA TCCAACACAA ATCTGTCCCT 
GGGTACAAGC CTAAGGTCAT TCCCAATGCT ATATGTGGCA TATGTCAGAA GGGTAAGGAG 
GCCAACAAGC GAGGCAAACC AGAGGCTCTC ATCCACTGCT CCCAGTGCCA AAACAGCGGT 
CACCCGTCCT GCTTGGACAT GAGTGTGGAT CTGGTGGCCA AGATCAAGAT GTACCCGTGG 
CAGTGTATGG AGTGTAAGAC GTGCACCGTG TGTCAGCAGC CCCATCATGA GGAGGAGATG 
ATGTTCTGTG ATAAGTGTGA TCGAGGCTTT CACACTTTCT GTGTGGGCAT GGACTCCATT 
CCTATGGGTT GCTGGGTCTG CGATTTATGC AGCAAAGACA TTTCAACACC TCAGAAGAAA 
GGACAAACAA AAACACCAAA AAAGGCCAAA TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

A network of epigenetic regulators guides developmental haematopoiesis in vivo.
Nature cell biology15(12)1516-25(2013 Dec)
Huang HT,Kathrein KL,Barton A,Gitlin Z,Huang YH,Ward TP,Hofmann O,Dibiase A,Song A,Tyekucheva S,Hide W,Zhou Y,Zon LI

Hematopoietic gene expression profile in zebrafish kidney marrow.
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
Song HD,Sun XJ,Deng M,Zhang GW,Zhou Y,Wu XY,Sheng Y,Chen Y,Ruan Z,Jiang CL,Fan HY,Zon LI,Kanki JP,Liu TX,Look AT,Chen Z

Comparative analysis of the PDCD2-TBP-PSMB1 region in vertebrates.
Gene335151-7(2004 Jun)
Trachtulec Z,Vlcek C,Mihola O,Forejt J