rps12 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	rps12
Entrez Gene ID	337007
Full Name	ribosomal protein S12
Synonyms	fa95a02,wu:fa95a02,zgc:73055
General protein information	Preferred Names ribosomal protein S12 Names 40S ribosomal protein S12
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001282177.1	NP_001269106.1	40S ribosomal protein S12
NM_200046.3	NP_956340.1	40S ribosomal protein S12

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	rps12	NP_956340.1
Saccharomyces cerevisiae (baker's yeast)	RPS12	NP_015014.3
Arabidopsis thaliana (thale cress)	AT2G32060	NP_180766.1
Xenopus tropicalis (tropical clawed frog)	rps12	NP_001008435.1
	LOC706087	XP_001094299.1
	RPS12	XP_002803937.1
Mus musculus (house mouse)	Rps12	NP_035425.2
Rattus norvegicus (Norway rat)	Rps12	NP_113897.2
Eremothecium gossypii	AGOS_ADR412C	NP_984507.1
Neurospora crassa	NCU06432	XP_957323.2
Homo sapiens (human)	RPS12	NP_001007.2
Canis lupus familiaris (dog)	RPS12	XP_849673.1
Schizosaccharomyces pombe (fission yeast)	rps1201	NP_587869.1
Arabidopsis thaliana (thale cress)	AT1G15930	NP_173045.1
Pan troglodytes (chimpanzee)	RPS12	NP_001239438.1
Bos taurus (cattle)	RPS12	NP_001014409.1
Gallus gallus (chicken)	RPS12	NP_001264840.1
Schizosaccharomyces pombe (fission yeast)	rps1202	NP_595206.1
Oryza sativa (rice)	Os07g0229900	NP_001059229.1
Caenorhabditis elegans (roundworm)	rps-12	NP_498221.1
Kluyveromyces lactis	KLLA0F00352g	XP_455095.1
Magnaporthe oryzae (rice blast fungus)	MGG_06480	XP_003717083.1
Oryza sativa (rice)	Os07g0150200	NP_001058899.2

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Systematic identification of seven ribosomal protein genes in bighead carp and their expression in response to microcystin-LR.
Cai Y, Zhang C, Hao L, Chen J, Xie P, Chen Z
The Journal of toxicological sciences41(2)293-302(2016 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rps12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rps12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa30437	NM_200046.3 Latest version!	Danio rerio ribosomal protein S12 (rps12), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa30437	NM_001282177.1 Latest version!	Danio rerio ribosomal protein S12 (rps12), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rps12 ( NM_001282177.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001269106.1 Danio rerio ribosomal protein S12 (rps12), transcript variant 2, mRNA.

Price & Availability↑

CloneID	ODa30437
Clone ID Related Accession (Same CDS sequence)	NM_001282177.1 , NM_200046.3
Accession Version	NM_001282177.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 399bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-03-30
Organism	Danio rerio(zebrafish)
Product	40S ribosomal protein S12
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT698501.2 and BI326372.1. On Aug 22, 2013 this sequence version replaced XM_005162302.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: CT698501.2, EV605023.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGCCGAGG AAGGCATCGC TGCCGGAGGT GTGATGGATG TCAACACCGC TCTGCCTGAA 
GTGCTGAAGA CCGCACTCAT CCACGACGGT CTGGCCCGCG GTATCCGTGA GGCCGCCAAG 
GCCCTCGACA AGCGCCAGGC TCATCTTTGC GTCCTCGCTG CAAACTGTGA CGAGCCCATG 
TACGTCAAGC TGGTGGAGGC TCTCTGTGCC GAGCATCAGA TCAACCTCAT CAAGGTTGAT 
GACAATAAGA AGCTCGGGGA ATGGGTTGGT CTGTGTAAGA TCGACAGAGA GGGCAAACCC 
CGCAAGGTGG TGGGCTGCAG CTGTGTAGTC ATCAAGGACT ACGGCAAAGA GTCCCAGGCT 
AAGGACGTCA TTGAAGAGTA CTTCAAATCC AAGAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001269106.1
CDS	73..471
Translation	MAEEGIAAGGVMDVNTALPEVLKTALIHDGLARGIREAAKALDKRQAHLCVLAANCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVIKDYGKESQAKDVIEEYFKSKK

Target ORF information:

RefSeq Version	NM_001282177.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ribosomal protein S12 (rps12), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001282177.1

ORF Insert Sequence:

ATGGCCGAGG AAGGCATCGC TGCCGGAGGT GTGATGGATG TCAACACCGC TCTGCCTGAA 
GTGCTGAAGA CCGCACTCAT CCACGACGGT CTGGCCCGCG GTATCCGTGA GGCCGCCAAG 
GCCCTCGACA AGCGCCAGGC TCATCTTTGC GTCCTCGCTG CAAACTGTGA CGAGCCCATG 
TACGTCAAGC TGGTGGAGGC TCTCTGTGCC GAGCATCAGA TCAACCTCAT CAAGGTTGAT 
GACAATAAGA AGCTCGGGGA ATGGGTTGGT CTGTGTAAGA TCGACAGAGA GGGCAAACCC 
CGCAAGGTGG TGGGCTGCAG CTGTGTAGTC ATCAAGGACT ACGGCAAAGA GTCCCAGGCT 
AAGGACGTCA TTGAAGAGTA CTTCAAATCC AAGAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rps12 ( NM_200046.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956340.1 Danio rerio ribosomal protein S12 (rps12), transcript variant 1, mRNA.

Price & Availability↑

CloneID	ODa30437
Clone ID Related Accession (Same CDS sequence)	NM_001282177.1 , NM_200046.3
Accession Version	NM_200046.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 399bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-03-30
Organism	Danio rerio(zebrafish)
Product	40S ribosomal protein S12
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR759830.8 and BI326372.1. On Aug 22, 2013 this sequence version replaced NM_200046.2. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: CT616735.2, GFIL01033675.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGCCGAGG AAGGCATCGC TGCCGGAGGT GTGATGGATG TCAACACCGC TCTGCCTGAA 
GTGCTGAAGA CCGCACTCAT CCACGACGGT CTGGCCCGCG GTATCCGTGA GGCCGCCAAG 
GCCCTCGACA AGCGCCAGGC TCATCTTTGC GTCCTCGCTG CAAACTGTGA CGAGCCCATG 
TACGTCAAGC TGGTGGAGGC TCTCTGTGCC GAGCATCAGA TCAACCTCAT CAAGGTTGAT 
GACAATAAGA AGCTCGGGGA ATGGGTTGGT CTGTGTAAGA TCGACAGAGA GGGCAAACCC 
CGCAAGGTGG TGGGCTGCAG CTGTGTAGTC ATCAAGGACT ACGGCAAAGA GTCCCAGGCT 
AAGGACGTCA TTGAAGAGTA CTTCAAATCC AAGAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956340.1
CDS	202..600
Translation	MAEEGIAAGGVMDVNTALPEVLKTALIHDGLARGIREAAKALDKRQAHLCVLAANCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVIKDYGKESQAKDVIEEYFKSKK

Target ORF information:

RefSeq Version	NM_200046.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ribosomal protein S12 (rps12), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200046.3

ORF Insert Sequence:

ATGGCCGAGG AAGGCATCGC TGCCGGAGGT GTGATGGATG TCAACACCGC TCTGCCTGAA 
GTGCTGAAGA CCGCACTCAT CCACGACGGT CTGGCCCGCG GTATCCGTGA GGCCGCCAAG 
GCCCTCGACA AGCGCCAGGC TCATCTTTGC GTCCTCGCTG CAAACTGTGA CGAGCCCATG 
TACGTCAAGC TGGTGGAGGC TCTCTGTGCC GAGCATCAGA TCAACCTCAT CAAGGTTGAT 
GACAATAAGA AGCTCGGGGA ATGGGTTGGT CTGTGTAAGA TCGACAGAGA GGGCAAACCC 
CGCAAGGTGG TGGGCTGCAG CTGTGTAGTC ATCAAGGACT ACGGCAAAGA GTCCCAGGCT 
AAGGACGTCA TTGAAGAGTA CTTCAAATCC AAGAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Systematic identification of seven ribosomal protein genes in bighead carp and their expression in response to microcystin-LR.
The Journal of toxicological sciences41(2)293-302(2016 Apr)
Cai Y,Zhang C,Hao L,Chen J,Xie P,Chen Z