pdgfd cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	pdgfd
Entrez Gene ID	100535718
Full Name	platelet derived growth factor d
General protein information	Preferred Names platelet derived growth factor d Names platelet-derived growth factor D zmp:0000001183
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_003200098.4	XP_003200146.4	platelet-derived growth factor D
XM_003200098.5	XP_003200146.4	platelet-derived growth factor D

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	PDGFD	XP_536595.3
Homo sapiens (human)	PDGFD	NP_079484.1
	PDGFD	XP_001099616.1
Mus musculus (house mouse)	Pdgfd	NP_082200.1
Gallus gallus (chicken)	PDGFD	NP_001264740.1
Bos taurus (cattle)	PDGFD	NP_001077175.1
Rattus norvegicus (Norway rat)	Pdgfd	NP_076452.1
Pan troglodytes (chimpanzee)	PDGFD	XP_522165.2
Danio rerio (zebrafish)	LOC100535718	XP_003200146.2
Xenopus tropicalis (tropical clawed frog)	LOC100492060	XP_002934980.2

Gene Ontology

The following pdgfd gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pdgfd cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa55339	XM_003200098.5 Latest version!	Danio rerio platelet derived growth factor d (pdgfd), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
View Old Accession Versions >>
ODa55339	XM_003200098.4	Danio rerio platelet derived growth factor d (pdgfd), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

pdgfd ( XM_003200098.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_003200146.4 Danio rerio platelet derived growth factor d (pdgfd), mRNA.

Price & Availability↑

CloneID	ODa55339
Clone ID Related Accession (Same CDS sequence)	XM_003200098.4 , XM_003200098.5
Accession Version	XM_003200098.4	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	platelet-derived growth factor D
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.6) and transcript sequence (GDQH01004164.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_003200098.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 30 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTGGCGCT TCTGGGTCGC GGATCAGCGG ACGGTTGGGT TCCAGATGAT GTGGCTGCTC 
GTGTGCTCCT TCATCGCGGT GTTGAGTGGT GAGAATTACC CCACACAGGC CCAGGTGATG 
TCCTCCAGAG TCATGAGGGC TTCAAACATA CGCAGCAATG NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNG ACTTGTACCG GAAGGAAGAG GTCATAATGA TCAAGGGCGG AGGTCACGTC 
CAGAGCCCGC GCTTCCCCAG CTCGTACCCG CGCAACCTGC TGCTGTCATG GAAACTACTG 
TCGCCGCCGC ACACACGCAT CCTGCTGGAG TTTGATGCTC AGTTTGGACT GGAAGAGGCC 
GAGAATGGAG TCTGCAGGTA TGATTATGTG GAAGTGGAGG ATATTTCTGA AACCAGCACC 
ATCATCTGGG GCCGCTGGTG TGGTCAAAGA GCTCCGTCAC GGATCACCTC CAAAACAAAC 
CTCATCAAAA TCACCTTCAA ATCAGACGAT TACTTCGTAG CCAAACCAGG ATTCAAGATC 
TGCTATTCAC TTGTGGACAG CTCACCTCTC GCCTCTCTGA CCAATTGGGA AGCAGTTACC 
ATAATGTCAG ATGTGGGCGG GACCTCAGGC ACGGACACAC CCCTGTCTGC ATCTGCGCTG 
GACGTGGAGA TCTCCAGCAT GAGCACAGTG GAGGAGCTGC TGAGACACAT GAACCCCTTC 
AGCTGGCAGG AGGACCTGGA GCAGCTCTAC ACACACACAC ACTACTACAG ACCCCGCGCC 
TTCCACAGCG ACCGCAAACA CAAGCTGGAC CTGGACCGTC TGTATGAGGA TGTGAAGCAG 
TACAGCTGTA CCCCGCGGAA TTACTCGGTG AATTTACGAG AGGAGCTGAA GGCCACCAAC 
GCCGTCTTCT TCCCTCGCTG TCTGCTGGTG CAGCGCTGTG GTGGAAACTG CGGCTGCGGG 
ACCGACAACT GGAACTCCTG CACCTGCAGC TCCGGAAAAA CCGTCAGGAA ACTGCACGAG 
GTGCTGAAGT TTTCTCCTGG TGCCAGTTTC TACAGGAAGA AAAGCAGAGC GCGGTGGACT 
CTGGAGGAGA TTTACCTGCA GCATCACGAG AGATGTGACT GTGTGTGTCA ATCCAGACCA 
CCACGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003200146.4
CDS	1125..2273
Translation	MWRFWVADQRTVGFQMMWLLVCSFIAVLSGENYPTQAQVMSSRVMRASNIRSNnullnullnullnullnullnullnullnullnullnullDLYRKEEVIMIKGGGHVQSPRFPSSYPRNLLLSWKLLSPPHTRILLEFDAQFGLEEAENGVCRYDYVEVEDISETSTIIWGRWCGQRAPSRITSKTNLIKITFKSDDYFVAKPGFKICYSLVDSSPLASLTNWEAVTIMSDVGGTSGTDTPLSASALDVEISSMSTVEELLRHMNPFSWQEDLEQLYTHTHYYRPRAFHSDRKHKLDLDRLYEDVKQYSCTPRNYSVNLREELKATNAVFFPRCLLVQRCGGNCGCGTDNWNSCTCSSGKTVRKLHEVLKFSPGASFYRKKSRARWTLEEIYLQHHERCDCVCQSRPPR

Target ORF information:

RefSeq Version	XM_003200098.4
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio platelet derived growth factor d (pdgfd), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003200098.4

ORF Insert Sequence:

ATGTGGCGCT TCTGGGTCGC GGATCAGCGG ACGGTTGGGT TCCAGATGAT GTGGCTGCTC 
GTGTGCTCCT TCATCGCGGT GTTGAGTGGT GAGAATTACC CCACACAGGC CCAGGTGATG 
TCCTCCAGAG TCATGAGGGC TTCAAACATA CGCAGCAATG NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNG ACTTGTACCG GAAGGAAGAG GTCATAATGA TCAAGGGCGG AGGTCACGTC 
CAGAGCCCGC GCTTCCCCAG CTCGTACCCG CGCAACCTGC TGCTGTCATG GAAACTACTG 
TCGCCGCCGC ACACACGCAT CCTGCTGGAG TTTGATGCTC AGTTTGGACT GGAAGAGGCC 
GAGAATGGAG TCTGCAGGTA TGATTATGTG GAAGTGGAGG ATATTTCTGA AACCAGCACC 
ATCATCTGGG GCCGCTGGTG TGGTCAAAGA GCTCCGTCAC GGATCACCTC CAAAACAAAC 
CTCATCAAAA TCACCTTCAA ATCAGACGAT TACTTCGTAG CCAAACCAGG ATTCAAGATC 
TGCTATTCAC TTGTGGACAG CTCACCTCTC GCCTCTCTGA CCAATTGGGA AGCAGTTACC 
ATAATGTCAG ATGTGGGCGG GACCTCAGGC ACGGACACAC CCCTGTCTGC ATCTGCGCTG 
GACGTGGAGA TCTCCAGCAT GAGCACAGTG GAGGAGCTGC TGAGACACAT GAACCCCTTC 
AGCTGGCAGG AGGACCTGGA GCAGCTCTAC ACACACACAC ACTACTACAG ACCCCGCGCC 
TTCCACAGCG ACCGCAAACA CAAGCTGGAC CTGGACCGTC TGTATGAGGA TGTGAAGCAG 
TACAGCTGTA CCCCGCGGAA TTACTCGGTG AATTTACGAG AGGAGCTGAA GGCCACCAAC 
GCCGTCTTCT TCCCTCGCTG TCTGCTGGTG CAGCGCTGTG GTGGAAACTG CGGCTGCGGG 
ACCGACAACT GGAACTCCTG CACCTGCAGC TCCGGAAAAA CCGTCAGGAA ACTGCACGAG 
GTGCTGAAGT TTTCTCCTGG TGCCAGTTTC TACAGGAAGA AAAGCAGAGC GCGGTGGACT 
CTGGAGGAGA TTTACCTGCA GCATCACGAG AGATGTGACT GTGTGTGTCA ATCCAGACCA 
CCACGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

pdgfd ( XM_003200098.5 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_003200146.4 Danio rerio platelet derived growth factor d (pdgfd), mRNA.

Price & Availability↑

CloneID	ODa55339
Clone ID Related Accession (Same CDS sequence)	XM_003200098.4 , XM_003200098.5
Accession Version	XM_003200098.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	platelet-derived growth factor D
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.7) and transcript sequence (GDQH01004164.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_003200098.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 30 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTGGCGCT TCTGGGTCGC GGATCAGCGG ACGGTTGGGT TCCAGATGAT GTGGCTGCTC 
GTGTGCTCCT TCATCGCGGT GTTGAGTGGT GAGAATTACC CCACACAGGC CCAGGTGATG 
TCCTCCAGAG TCATGAGGGC TTCAAACATA CGCAGCAATG NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNG ACTTGTACCG GAAGGAAGAG GTCATAATGA TCAAGGGCGG AGGTCACGTC 
CAGAGCCCGC GCTTCCCCAG CTCGTACCCG CGCAACCTGC TGCTGTCATG GAAACTACTG 
TCGCCGCCGC ACACACGCAT CCTGCTGGAG TTTGATGCTC AGTTTGGACT GGAAGAGGCC 
GAGAATGGAG TCTGCAGGTA TGATTATGTG GAAGTGGAGG ATATTTCTGA AACCAGCACC 
ATCATCTGGG GCCGCTGGTG TGGTCAAAGA GCTCCGTCAC GGATCACCTC CAAAACAAAC 
CTCATCAAAA TCACCTTCAA ATCAGACGAT TACTTCGTAG CCAAACCAGG ATTCAAGATC 
TGCTATTCAC TTGTGGACAG CTCACCTCTC GCCTCTCTGA CCAATTGGGA AGCAGTTACC 
ATAATGTCAG ATGTGGGCGG GACCTCAGGC ACGGACACAC CCCTGTCTGC ATCTGCGCTG 
GACGTGGAGA TCTCCAGCAT GAGCACAGTG GAGGAGCTGC TGAGACACAT GAACCCCTTC 
AGCTGGCAGG AGGACCTGGA GCAGCTCTAC ACACACACAC ACTACTACAG ACCCCGCGCC 
TTCCACAGCG ACCGCAAACA CAAGCTGGAC CTGGACCGTC TGTATGAGGA TGTGAAGCAG 
TACAGCTGTA CCCCGCGGAA TTACTCGGTG AATTTACGAG AGGAGCTGAA GGCCACCAAC 
GCCGTCTTCT TCCCTCGCTG TCTGCTGGTG CAGCGCTGTG GTGGAAACTG CGGCTGCGGG 
ACCGACAACT GGAACTCCTG CACCTGCAGC TCCGGAAAAA CCGTCAGGAA ACTGCACGAG 
GTGCTGAAGT TTTCTCCTGG TGCCAGTTTC TACAGGAAGA AAAGCAGAGC GCGGTGGACT 
CTGGAGGAGA TTTACCTGCA GCATCACGAG AGATGTGACT GTGTGTGTCA ATCCAGACCA 
CCACGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003200146.4
CDS	1103..2251
Translation	MWRFWVADQRTVGFQMMWLLVCSFIAVLSGENYPTQAQVMSSRVMRASNIRSNnullnullnullnullnullnullnullnullnullnullDLYRKEEVIMIKGGGHVQSPRFPSSYPRNLLLSWKLLSPPHTRILLEFDAQFGLEEAENGVCRYDYVEVEDISETSTIIWGRWCGQRAPSRITSKTNLIKITFKSDDYFVAKPGFKICYSLVDSSPLASLTNWEAVTIMSDVGGTSGTDTPLSASALDVEISSMSTVEELLRHMNPFSWQEDLEQLYTHTHYYRPRAFHSDRKHKLDLDRLYEDVKQYSCTPRNYSVNLREELKATNAVFFPRCLLVQRCGGNCGCGTDNWNSCTCSSGKTVRKLHEVLKFSPGASFYRKKSRARWTLEEIYLQHHERCDCVCQSRPPR

Target ORF information:

RefSeq Version	XM_003200098.5
Organism	Danio rerio(zebrafish)
Definition	Danio rerio platelet derived growth factor d (pdgfd), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003200098.5

ORF Insert Sequence:

ATGTGGCGCT TCTGGGTCGC GGATCAGCGG ACGGTTGGGT TCCAGATGAT GTGGCTGCTC 
GTGTGCTCCT TCATCGCGGT GTTGAGTGGT GAGAATTACC CCACACAGGC CCAGGTGATG 
TCCTCCAGAG TCATGAGGGC TTCAAACATA CGCAGCAATG NNNNNNNNNN NNNNNNNNNN 
NNNNNNNNNG ACTTGTACCG GAAGGAAGAG GTCATAATGA TCAAGGGCGG AGGTCACGTC 
CAGAGCCCGC GCTTCCCCAG CTCGTACCCG CGCAACCTGC TGCTGTCATG GAAACTACTG 
TCGCCGCCGC ACACACGCAT CCTGCTGGAG TTTGATGCTC AGTTTGGACT GGAAGAGGCC 
GAGAATGGAG TCTGCAGGTA TGATTATGTG GAAGTGGAGG ATATTTCTGA AACCAGCACC 
ATCATCTGGG GCCGCTGGTG TGGTCAAAGA GCTCCGTCAC GGATCACCTC CAAAACAAAC 
CTCATCAAAA TCACCTTCAA ATCAGACGAT TACTTCGTAG CCAAACCAGG ATTCAAGATC 
TGCTATTCAC TTGTGGACAG CTCACCTCTC GCCTCTCTGA CCAATTGGGA AGCAGTTACC 
ATAATGTCAG ATGTGGGCGG GACCTCAGGC ACGGACACAC CCCTGTCTGC ATCTGCGCTG 
GACGTGGAGA TCTCCAGCAT GAGCACAGTG GAGGAGCTGC TGAGACACAT GAACCCCTTC 
AGCTGGCAGG AGGACCTGGA GCAGCTCTAC ACACACACAC ACTACTACAG ACCCCGCGCC 
TTCCACAGCG ACCGCAAACA CAAGCTGGAC CTGGACCGTC TGTATGAGGA TGTGAAGCAG 
TACAGCTGTA CCCCGCGGAA TTACTCGGTG AATTTACGAG AGGAGCTGAA GGCCACCAAC 
GCCGTCTTCT TCCCTCGCTG TCTGCTGGTG CAGCGCTGTG GTGGAAACTG CGGCTGCGGG 
ACCGACAACT GGAACTCCTG CACCTGCAGC TCCGGAAAAA CCGTCAGGAA ACTGCACGAG 
GTGCTGAAGT TTTCTCCTGG TGCCAGTTTC TACAGGAAGA AAAGCAGAGC GCGGTGGACT 
CTGGAGGAGA TTTACCTGCA GCATCACGAG AGATGTGACT GTGTGTGTCA ATCCAGACCA 
CCACGATAA