shpk cDNA ORF clone, Danio rerio(Zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	shpk
Entrez Gene ID	100001676
Full Name	sedoheptulokinase
Synonyms	si:dkey-9e15.3
General protein information	Preferred Names sedoheptulokinase Names sedoheptulokinase carkl
Gene Type	protein-coding
Organism	Danio rerio(Zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_001341591.7	XP_001341627.4	sedoheptulokinase isoform X1
XM_001341591.6	XP_001341627.4	sedoheptulokinase
XM_021471661.1	XP_021327336.1	sedoheptulokinase isoform X2

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	SHPK	XP_548339.1
Gallus gallus (chicken)	SHPK	XP_415852.4
Xenopus tropicalis (tropical clawed frog)	shpk	NP_001120078.1
Homo sapiens (human)	SHPK	NP_037408.2
Mus musculus (house mouse)	Shpk	NP_083307.1
	LOC721465	XP_001117628.1
Rattus norvegicus (Norway rat)	Shpk	NP_001028854.1
Pan troglodytes (chimpanzee)	SHPK	XP_523551.3
Bos taurus (cattle)	SHPK	NP_001069016.1
Danio rerio (zebrafish)	shpk	XP_001341627.4
Caenorhabditis elegans (roundworm)	CELE_T25C8.1	NP_499810.2

Gene Ontology

The following shpk gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the shpk cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa10826	XM_001341591.7 Latest version!	Danio rerio sedoheptulokinase (shpk), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
View Old Accession Versions >>
ODa10826	XM_001341591.6	Danio rerio sedoheptulokinase (shpk), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

shpk ( XM_001341591.7 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_001341627.4 Danio rerio sedoheptulokinase (shpk), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa10826
Clone ID Related Accession (Same CDS sequence)	XM_001341591.7 , XM_001341591.6
Accession Version	XM_001341591.7 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1410bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	sedoheptulokinase isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_001341591.6. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGGAAT CACAGACCGG TTGCGATCGC TTTGTTCTCG GAATGGATCT GGGCACCACA 
TCGGTGAAAG TGGTGCTGTT GGAAGCGCAG TCAAAGACAG TGACAGAGAG CAGGAGCTTC 
ACTACAAACG CTGATATCAG CAGCAGCACA CACACACATG CCAAAGAGCA GGATCCTGCA 
CTTATAATTG CCGCTCTGGA CCAGTGCATG GCTGCTTTGC CTAAAGACAA GCTGAAAAAA 
GTCAAGTTCA TTGGAGTATG TGGACAAATG CATGGCATTG TGTTGTGGAA ATCTAACTCA 
GGCTGTGAAT GGCAGAGTAA AGATGGCATC ACCAGATTCA GTCCCAAAGA TGTCAGTCAG 
CTGATCACAT GGCAGGACGG GCGCTGCGAC TTTGACTTCC TGTCGGCTTT ACCTAAACCA 
GATTCACACC TGAGTGTGGC CACCGGCTTC GGCTGTGCCA CGGTCTTCTG GTATATGAAA 
CACAGGCCCG AGTTCCTGTC AGGCTTCAGT GATGCAGGAA CCATTCAAGA CTATGTGGTT 
TCCATGTTGT GCAGCCTTGA CAAGTGTGTG ATGACTGGAC AAAATGCTGC CAGCTGGGGC 
TACTTCAACA CAGCCACTAA CCAATGGAAC ACACACATTC TGAAGGATGC AGGTTTCCCT 
GTGCACCTCT TGCCTGTGCT GGTGGATTCA GGACGTGTGG CTGGTCATAC TTCCTGTGAA 
TGGTACGGCA TTCCTGCTCA CACAGCGGTC GGGGCGGCAC TAGGAGACTT CCAGTGTAGT 
GTGTACTCCT GCATAACTGA CAGAGGACAC GCAGTGTTGA ATATGAGTAC TTCAGCCCAG 
CTGACGTTCA GGATGCCAGC TGAATTCACC CCTACCAGTT CTCCAGACCC GCTCTCGCCC 
ATCGCTTATT TCCCATACTT TGAGGGATCA TATCTTGCGG TGGCCGCATC ACTTAATGGA 
GGCAACGTTA TGGCCACCTT CGTCAGAATG CTGGACTCAT GGATGAAAGA ATTTGGACTG 
GAAGTAAGTG AGTCCAGCAT CTACTCTCAG CTCATCCATT CTGCTCTGGC CCAGCCGAAT 
ACTGACCTAA CCGTGACATC AACACTACTA GGAGAGCGTC ATGCCCCATC CAGCAGTGCC 
AGCGTCTCCC ACATCTCATC CTCCAACCTG TCTCTGGGTC ACGTGACCCG GGCTGTGTGC 
AGGGGTATTA TTGAAAACCT GGCCACTATG ATGCCCCCTC AGAGCCTGCG GGCCGCTGGC 
GTGCGCTGTA TTATCGGCAG TGGCAGTGCT CTGTCATGTA ACGCAGTTCT GCAACAGGAA 
GTGGAGAGAG TATTTCCATT TCCTGTTGTC TATGGAAAAG ATGTGGACTC AGCAGTTGGA 
GTTGCCATGG TGATCAGTGA CCAAACATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001341627.4
CDS	115..1524
Translation	MAESQTGCDRFVLGMDLGTTSVKVVLLEAQSKTVTESRSFTTNADISSSTHTHAKEQDPALIIAALDQCMAALPKDKLKKVKFIGVCGQMHGIVLWKSNSGCEWQSKDGITRFSPKDVSQLITWQDGRCDFDFLSALPKPDSHLSVATGFGCATVFWYMKHRPEFLSGFSDAGTIQDYVVSMLCSLDKCVMTGQNAASWGYFNTATNQWNTHILKDAGFPVHLLPVLVDSGRVAGHTSCEWYGIPAHTAVGAALGDFQCSVYSCITDRGHAVLNMSTSAQLTFRMPAEFTPTSSPDPLSPIAYFPYFEGSYLAVAASLNGGNVMATFVRMLDSWMKEFGLEVSESSIYSQLIHSALAQPNTDLTVTSTLLGERHAPSSSASVSHISSSNLSLGHVTRAVCRGIIENLATMMPPQSLRAAGVRCIIGSGSALSCNAVLQQEVERVFPFPVVYGKDVDSAVGVAMVISDQT

Target ORF information:

RefSeq Version	XM_001341591.7
Organism	Danio rerio(zebrafish)
Definition	Danio rerio sedoheptulokinase (shpk), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001341591.7

ORF Insert Sequence:

ATGGCGGAAT CACAGACCGG TTGCGATCGC TTTGTTCTCG GAATGGATCT GGGCACCACA 
TCGGTGAAAG TGGTGCTGTT GGAAGCGCAG TCAAAGACAG TGACAGAGAG CAGGAGCTTC 
ACTACAAACG CTGATATCAG CAGCAGCACA CACACACATG CCAAAGAGCA GGATCCTGCA 
CTTATAATTG CCGCTCTGGA CCAGTGCATG GCTGCTTTGC CTAAAGACAA GCTGAAAAAA 
GTCAAGTTCA TTGGAGTATG TGGACAAATG CATGGCATTG TGTTGTGGAA ATCTAACTCA 
GGCTGTGAAT GGCAGAGTAA AGATGGCATC ACCAGATTCA GTCCCAAAGA TGTCAGTCAG 
CTGATCACAT GGCAGGACGG GCGCTGCGAC TTTGACTTCC TGTCGGCTTT ACCTAAACCA 
GATTCACACC TGAGTGTGGC CACCGGCTTC GGCTGTGCCA CGGTCTTCTG GTATATGAAA 
CACAGGCCCG AGTTCCTGTC AGGCTTCAGT GATGCAGGAA CCATTCAAGA CTATGTGGTT 
TCCATGTTGT GCAGCCTTGA CAAGTGTGTG ATGACTGGAC AAAATGCTGC CAGCTGGGGC 
TACTTCAACA CAGCCACTAA CCAATGGAAC ACACACATTC TGAAGGATGC AGGTTTCCCT 
GTGCACCTCT TGCCTGTGCT GGTGGATTCA GGACGTGTGG CTGGTCATAC TTCCTGTGAA 
TGGTACGGCA TTCCTGCTCA CACAGCGGTC GGGGCGGCAC TAGGAGACTT CCAGTGTAGT 
GTGTACTCCT GCATAACTGA CAGAGGACAC GCAGTGTTGA ATATGAGTAC TTCAGCCCAG 
CTGACGTTCA GGATGCCAGC TGAATTCACC CCTACCAGTT CTCCAGACCC GCTCTCGCCC 
ATCGCTTATT TCCCATACTT TGAGGGATCA TATCTTGCGG TGGCCGCATC ACTTAATGGA 
GGCAACGTTA TGGCCACCTT CGTCAGAATG CTGGACTCAT GGATGAAAGA ATTTGGACTG 
GAAGTAAGTG AGTCCAGCAT CTACTCTCAG CTCATCCATT CTGCTCTGGC CCAGCCGAAT 
ACTGACCTAA CCGTGACATC AACACTACTA GGAGAGCGTC ATGCCCCATC CAGCAGTGCC 
AGCGTCTCCC ACATCTCATC CTCCAACCTG TCTCTGGGTC ACGTGACCCG GGCTGTGTGC 
AGGGGTATTA TTGAAAACCT GGCCACTATG ATGCCCCCTC AGAGCCTGCG GGCCGCTGGC 
GTGCGCTGTA TTATCGGCAG TGGCAGTGCT CTGTCATGTA ACGCAGTTCT GCAACAGGAA 
GTGGAGAGAG TATTTCCATT TCCTGTTGTC TATGGAAAAG ATGTGGACTC AGCAGTTGGA 
GTTGCCATGG TGATCAGTGA CCAAACATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

shpk ( XM_001341591.6 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_001341627.4 Danio rerio sedoheptulokinase (shpk), mRNA.

Price & Availability↑

CloneID	ODa10826
Clone ID Related Accession (Same CDS sequence)	XM_001341591.7 , XM_001341591.6
Accession Version	XM_001341591.6	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1410bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	sedoheptulokinase
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_001341591.5. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGGAAT CACAGACCGG TTGCGATCGC TTTGTTCTCG GAATGGATCT GGGCACCACA 
TCGGTGAAAG TGGTGCTGTT GGAAGCGCAG TCAAAGACAG TGACAGAGAG CAGGAGCTTC 
ACTACAAACG CTGATATCAG CAGCAGCACA CACACACATG CCAAAGAGCA GGATCCTGCA 
CTTATAATTG CCGCTCTGGA CCAGTGCATG GCTGCTTTGC CTAAAGACAA GCTGAAAAAA 
GTCAAGTTCA TTGGAGTATG TGGACAAATG CATGGCATTG TGTTGTGGAA ATCTAACTCA 
GGCTGTGAAT GGCAGAGTAA AGATGGCATC ACCAGATTCA GTCCCAAAGA TGTCAGTCAG 
CTGATCACAT GGCAGGACGG GCGCTGCGAC TTTGACTTCC TGTCGGCTTT ACCTAAACCA 
GATTCACACC TGAGTGTGGC CACCGGCTTC GGCTGTGCCA CGGTCTTCTG GTATATGAAA 
CACAGGCCCG AGTTCCTGTC AGGCTTCAGT GATGCAGGAA CCATTCAAGA CTATGTGGTT 
TCCATGTTGT GCAGCCTTGA CAAGTGTGTG ATGACTGGAC AAAATGCTGC CAGCTGGGGC 
TACTTCAACA CAGCCACTAA CCAATGGAAC ACACACATTC TGAAGGATGC AGGTTTCCCT 
GTGCACCTCT TGCCTGTGCT GGTGGATTCA GGACGTGTGG CTGGTCATAC TTCCTGTGAA 
TGGTACGGCA TTCCTGCTCA CACAGCGGTC GGGGCGGCAC TAGGAGACTT CCAGTGTAGT 
GTGTACTCCT GCATAACTGA CAGAGGACAC GCAGTGTTGA ATATGAGTAC TTCAGCCCAG 
CTGACGTTCA GGATGCCAGC TGAATTCACC CCTACCAGTT CTCCAGACCC GCTCTCGCCC 
ATCGCTTATT TCCCATACTT TGAGGGATCA TATCTTGCGG TGGCCGCATC ACTTAATGGA 
GGCAACGTTA TGGCCACCTT CGTCAGAATG CTGGACTCAT GGATGAAAGA ATTTGGACTG 
GAAGTAAGTG AGTCCAGCAT CTACTCTCAG CTCATCCATT CTGCTCTGGC CCAGCCGAAT 
ACTGACCTAA CCGTGACATC AACACTACTA GGAGAGCGTC ATGCCCCATC CAGCAGTGCC 
AGCGTCTCCC ACATCTCATC CTCCAACCTG TCTCTGGGTC ACGTGACCCG GGCTGTGTGC 
AGGGGTATTA TTGAAAACCT GGCCACTATG ATGCCCCCTC AGAGCCTGCG GGCCGCTGGC 
GTGCGCTGTA TTATCGGCAG TGGCAGTGCT CTGTCATGTA ACGCAGTTCT GCAACAGGAA 
GTGGAGAGAG TATTTCCATT TCCTGTTGTC TATGGAAAAG ATGTGGACTC AGCAGTTGGA 
GTTGCCATGG TGATCAGTGA CCAAACATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001341627.4
CDS	100..1509
Translation	MAESQTGCDRFVLGMDLGTTSVKVVLLEAQSKTVTESRSFTTNADISSSTHTHAKEQDPALIIAALDQCMAALPKDKLKKVKFIGVCGQMHGIVLWKSNSGCEWQSKDGITRFSPKDVSQLITWQDGRCDFDFLSALPKPDSHLSVATGFGCATVFWYMKHRPEFLSGFSDAGTIQDYVVSMLCSLDKCVMTGQNAASWGYFNTATNQWNTHILKDAGFPVHLLPVLVDSGRVAGHTSCEWYGIPAHTAVGAALGDFQCSVYSCITDRGHAVLNMSTSAQLTFRMPAEFTPTSSPDPLSPIAYFPYFEGSYLAVAASLNGGNVMATFVRMLDSWMKEFGLEVSESSIYSQLIHSALAQPNTDLTVTSTLLGERHAPSSSASVSHISSSNLSLGHVTRAVCRGIIENLATMMPPQSLRAAGVRCIIGSGSALSCNAVLQQEVERVFPFPVVYGKDVDSAVGVAMVISDQT

Target ORF information:

RefSeq Version	XM_001341591.6
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio sedoheptulokinase (shpk), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001341591.6

ORF Insert Sequence:

ATGGCGGAAT CACAGACCGG TTGCGATCGC TTTGTTCTCG GAATGGATCT GGGCACCACA 
TCGGTGAAAG TGGTGCTGTT GGAAGCGCAG TCAAAGACAG TGACAGAGAG CAGGAGCTTC 
ACTACAAACG CTGATATCAG CAGCAGCACA CACACACATG CCAAAGAGCA GGATCCTGCA 
CTTATAATTG CCGCTCTGGA CCAGTGCATG GCTGCTTTGC CTAAAGACAA GCTGAAAAAA 
GTCAAGTTCA TTGGAGTATG TGGACAAATG CATGGCATTG TGTTGTGGAA ATCTAACTCA 
GGCTGTGAAT GGCAGAGTAA AGATGGCATC ACCAGATTCA GTCCCAAAGA TGTCAGTCAG 
CTGATCACAT GGCAGGACGG GCGCTGCGAC TTTGACTTCC TGTCGGCTTT ACCTAAACCA 
GATTCACACC TGAGTGTGGC CACCGGCTTC GGCTGTGCCA CGGTCTTCTG GTATATGAAA 
CACAGGCCCG AGTTCCTGTC AGGCTTCAGT GATGCAGGAA CCATTCAAGA CTATGTGGTT 
TCCATGTTGT GCAGCCTTGA CAAGTGTGTG ATGACTGGAC AAAATGCTGC CAGCTGGGGC 
TACTTCAACA CAGCCACTAA CCAATGGAAC ACACACATTC TGAAGGATGC AGGTTTCCCT 
GTGCACCTCT TGCCTGTGCT GGTGGATTCA GGACGTGTGG CTGGTCATAC TTCCTGTGAA 
TGGTACGGCA TTCCTGCTCA CACAGCGGTC GGGGCGGCAC TAGGAGACTT CCAGTGTAGT 
GTGTACTCCT GCATAACTGA CAGAGGACAC GCAGTGTTGA ATATGAGTAC TTCAGCCCAG 
CTGACGTTCA GGATGCCAGC TGAATTCACC CCTACCAGTT CTCCAGACCC GCTCTCGCCC 
ATCGCTTATT TCCCATACTT TGAGGGATCA TATCTTGCGG TGGCCGCATC ACTTAATGGA 
GGCAACGTTA TGGCCACCTT CGTCAGAATG CTGGACTCAT GGATGAAAGA ATTTGGACTG 
GAAGTAAGTG AGTCCAGCAT CTACTCTCAG CTCATCCATT CTGCTCTGGC CCAGCCGAAT 
ACTGACCTAA CCGTGACATC AACACTACTA GGAGAGCGTC ATGCCCCATC CAGCAGTGCC 
AGCGTCTCCC ACATCTCATC CTCCAACCTG TCTCTGGGTC ACGTGACCCG GGCTGTGTGC 
AGGGGTATTA TTGAAAACCT GGCCACTATG ATGCCCCCTC AGAGCCTGCG GGCCGCTGGC 
GTGCGCTGTA TTATCGGCAG TGGCAGTGCT CTGTCATGTA ACGCAGTTCT GCAACAGGAA 
GTGGAGAGAG TATTTCCATT TCCTGTTGTC TATGGAAAAG ATGTGGACTC AGCAGTTGGA 
GTTGCCATGG TGATCAGTGA CCAAACATGA