LOC111133001 cDNA ORF clone, Crassostrea virginica(eastern oyster)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC111133001
Entrez Gene ID	111133001
Full Name	protocadherin-like wing polarity protein stan
Gene Type	protein-coding
Organism	Crassostrea virginica(eastern oyster)

mRNA and Protein(s)

mRNA	Protein	Name
XM_022481022.1	XP_022336730.1	protocadherin-like wing polarity protein stan

Pathways from BioSystems
Gene Ontology

The following LOC111133001 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC111133001 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCr187262	XM_022481022.1 Latest version!	Crassostrea virginica protocadherin-like wing polarity protein stan (LOC111133001), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC111133001 ( XM_022481022.1 ) cDNA ORF clone, Crassostrea virginica(eastern oyster) -> XP_022336730.1 Crassostrea virginica protocadherin-like wing polarity protein stan (LOC111133001), mRNA.

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CloneID	OCr187262
Clone ID Related Accession (Same CDS sequence)	XM_022481022.1
Accession Version	XM_022481022.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2763bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-09-13
Organism	Crassostrea virginica(eastern oyster)
Product	protocadherin-like wing polarity protein stan
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035784.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Crassostrea virginica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAATGTC TAGTGCAAAT AGTTTTGTTT ACACTAGTTT TACGAGGCAT TCGGACGCAA 
ATGACGTCCT GTACAGGTGG AACCGTCGGA GTAAATCCAG CCTCCTACTC CTCTAGTACT 
TCCGGTCATG GCGCAAATTC TGCCTTTATA CTGGAAGACC CTTTGTATCA GATCACGTGT 
TGTGGGGCCA TTACATCATG GCAGATTGCC ACCAGTGGAT CCGGGGGTAT AACCTTGCAA 
GTGTGGAGAA AACTGTCTGT CAATGTATAC CAGCTAATCG GTCAGAATGT GTTTTCAGCA 
GGATCAGGGA CACACACTCC AGCTGACAGA ATAATGGTGC AACATGGAGA TTATATTGGA 
TGGCTAAGCA ACGGAGCATC AATGAAATAC GGCTCTGGGA CATCAGTTTT GAACAGAGTG 
GTCACCACTA TGGCGGCGTT ACAGCCCGGA GACTATTATG ACTGGAGTAG CGTGTCTCCA 
GAGGGCGTGT CCAGAAACTA TGCAATAAAA GCGACAGTTT CTGCAAGTAC TCCACCTACG 
TTTGGCAGTA TACCAAGTTT AGTCACTTTT GCAGAAGAAA CGCCAGAAAA CACTGTTGTC 
TATTCTCTCC CTATCTCCGA TGCTGATTCC ACAGACATCA TCACACTGTA CACGAAGTCA 
GAAACGTCTG GATATTTTGC AGTAGATAGT TCCACATTTC AAATAAAGAC AAAGCAAGAC 
CACATTCCTT TAGGATCGAC CTACAAAGTC GCTGTGAAGG TCGTGGATAC CTGCCACAAG 
GAAGCCACTG CCACTGTAAC ACTGTCTGTC TCCAACTCGG ATTTAACGAT GTCAATAACA 
CCTACAACAT CAACTGTTCT TGAAAACTCT TCAGAGGAGC AATGGTTGGC TGATCTGATC 
GTTTCAGACC CAATGAATAG ATACTCCTGT TCTCTACAGA CGGCTAATGT TCCCTTCATT 
GTACGTCAGA ACAGTAGTGG CATTTTAGGG TATAGTCTTT ATCTGCAAAA GTGGCCACAA 
CTTGACAGTT CCGTAACATC AAGTTACAGC TTAAGCGTAC AATGTACCGA CGGGACGAGC 
ACGAAGACAG CCAGTCATAC CGTCAGCGTC ACTGTCAACT CCAAACCCAC CATATCTAAC 
CTAGGTAGTG GAGTTACTGT GACGTTAGAT GCAAGAACAG TTTTGATTGG CCATTTTGTG 
TATAACGTCA CGGCGTCAGA CAGTGAAGGA GATGATATCA GCTTTTCGCT CACATGTAGT 
CCATCGGGAT GCCCATTCAA AATTTATGAC TCCGGTGCTA TATTGCTGAC GTCACGCCTC 
ATAACACATA CTGTAACATC TTATACCTTG ACCGTTCGCG TAAGAGACGC TTACACGTCA 
AGCGCTAATA GAGGAACCCT AACTGTGTCA ATTACAAATA GGAACTCGTC CCCTTCCCTC 
ACCATACCAG TACTGACATC TGTATCGGAG AATTCCCCTC TGGGCCACTC TGTCCTGACG 
GTGACTTCTT CTGACGTAGA ATCCGGGACC TTGTCAGTGT ACGGTGTGTT CACACCGGCC 
TATGGACTCA AGTACTTTGA CCTCAACGAA ACAAGTGGGG TTGTGACTAC ATCAACAGTG 
GAGAATATTG ATTACGACAT TATATCTACA AAAGACATAG TACTGATAGT CTACACGTCT 
GACGGAATCG CCATCACTTC ACAAACGGGA ACCATCCGAA TCGTCGATGT CAACGAACCA 
TGTAATTTTA CTGAAGATTA TTACCGTATT ATTAGAGAGG AGGGCAGTAG CGGATCCACG 
TTTCCTCTGC CAGATTACAA TATCATCGAT CCCGATAACG GGGAAACATT CACTTTCCAG 
AAGACCTGTG CTGGTGTGTT CGATGCGAAA GTCTCTGTGG ACACAAACAC CGGGCAGTTC 
TCATTGTCTG TGGACTACGA TCTCGATGTG CCAGGAACCA GTGCTAGCTT TAATTGCACG 
TTAACTGTTA CTGACTCGGC GGGTCACTCG GACACGGCAG TGGTTGGTGT CTTCATTGAG 
TATAAAAACG AGTTCGCTCC AACGTTCTCA CTTTCTTCTA TTTCCATTAC ACTGCAATCC 
CACGAACTTA TTGGAGCAAT AGTGACAAAT TTCACTGCAC AAGACTATGA TCTTTCAACT 
CAGGACGATG GCAAATTTTA TTACACACTT GATCAATCTT CAAACACAAA GGAATATTTT 
GGAATTATGT CCAATGGGAG TTTATACATC AAAGAAGATT TAACTCCCCT TTATTTAGGA 
AAAACCTTGT CTATGACATT AACGGCAAAA GACTTTGGGA ATCCGAGTAA GCAAAGTTCC 
TTGGCTATAA CTATCCAGAT TCCAATCTCT ACGACCACGT TGGCCTCTGT TTCAACTGAT 
AAATCTTTAA AGTTTGAAGA GGATAACAAA AATGCGGTGC TCGTTTCTCT GGTTGGCCTT 
GCCTCCGTTG CTTTGCTTTG TACATTGTTC GTGTTGATTA CCAAGAATTG TCATCATAAA 
ATGAAAAAAA GTCAACCTAG ATATAATCTA CTCAAGTCTG AACCACCTGC CCAAGAGAAA 
TCCTTAAACA CCGAGGGTGA AGACTTTAAG ATGGTTAAAA ACGAAGCGGG CACTAATAAT 
ACTCATGATA GTAGCAAATC AGAGAGGGAA ACTGACAAAG AACTGATCAA AGAACAAGAC 
AAGTCCTTGT CACACGTCTA TGCTCAAAAT TCAAACAAAG AAGAAAACGA TGATAAGTGG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022336730.1
CDS	97..2859
Translation	MKCLVQIVLFTLVLRGIRTQMTSCTGGTVGVNPASYSSSTSGHGANSAFILEDPLYQITCCGAITSWQIATSGSGGITLQVWRKLSVNVYQLIGQNVFSAGSGTHTPADRIMVQHGDYIGWLSNGASMKYGSGTSVLNRVVTTMAALQPGDYYDWSSVSPEGVSRNYAIKATVSASTPPTFGSIPSLVTFAEETPENTVVYSLPISDADSTDIITLYTKSETSGYFAVDSSTFQIKTKQDHIPLGSTYKVAVKVVDTCHKEATATVTLSVSNSDLTMSITPTTSTVLENSSEEQWLADLIVSDPMNRYSCSLQTANVPFIVRQNSSGILGYSLYLQKWPQLDSSVTSSYSLSVQCTDGTSTKTASHTVSVTVNSKPTISNLGSGVTVTLDARTVLIGHFVYNVTASDSEGDDISFSLTCSPSGCPFKIYDSGAILLTSRLITHTVTSYTLTVRVRDAYTSSANRGTLTVSITNRNSSPSLTIPVLTSVSENSPLGHSVLTVTSSDVESGTLSVYGVFTPAYGLKYFDLNETSGVVTTSTVENIDYDIISTKDIVLIVYTSDGIAITSQTGTIRIVDVNEPCNFTEDYYRIIREEGSSGSTFPLPDYNIIDPDNGETFTFQKTCAGVFDAKVSVDTNTGQFSLSVDYDLDVPGTSASFNCTLTVTDSAGHSDTAVVGVFIEYKNEFAPTFSLSSISITLQSHELIGAIVTNFTAQDYDLSTQDDGKFYYTLDQSSNTKEYFGIMSNGSLYIKEDLTPLYLGKTLSMTLTAKDFGNPSKQSSLAITIQIPISTTTLASVSTDKSLKFEEDNKNAVLVSLVGLASVALLCTLFVLITKNCHHKMKKSQPRYNLLKSEPPAQEKSLNTEGEDFKMVKNEAGTNNTHDSSKSERETDKELIKEQDKSLSHVYAQNSNKEENDDKW

Target ORF information:

RefSeq Version	XM_022481022.1
Organism	Crassostrea virginica(eastern oyster)
Definition	Crassostrea virginica protocadherin-like wing polarity protein stan (LOC111133001), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022481022.1

ORF Insert Sequence:

ATGAAATGTC TAGTGCAAAT AGTTTTGTTT ACACTAGTTT TACGAGGCAT TCGGACGCAA 
ATGACGTCCT GTACAGGTGG AACCGTCGGA GTAAATCCAG CCTCCTACTC CTCTAGTACT 
TCCGGTCATG GCGCAAATTC TGCCTTTATA CTGGAAGACC CTTTGTATCA GATCACGTGT 
TGTGGGGCCA TTACATCATG GCAGATTGCC ACCAGTGGAT CCGGGGGTAT AACCTTGCAA 
GTGTGGAGAA AACTGTCTGT CAATGTATAC CAGCTAATCG GTCAGAATGT GTTTTCAGCA 
GGATCAGGGA CACACACTCC AGCTGACAGA ATAATGGTGC AACATGGAGA TTATATTGGA 
TGGCTAAGCA ACGGAGCATC AATGAAATAC GGCTCTGGGA CATCAGTTTT GAACAGAGTG 
GTCACCACTA TGGCGGCGTT ACAGCCCGGA GACTATTATG ACTGGAGTAG CGTGTCTCCA 
GAGGGCGTGT CCAGAAACTA TGCAATAAAA GCGACAGTTT CTGCAAGTAC TCCACCTACG 
TTTGGCAGTA TACCAAGTTT AGTCACTTTT GCAGAAGAAA CGCCAGAAAA CACTGTTGTC 
TATTCTCTCC CTATCTCCGA TGCTGATTCC ACAGACATCA TCACACTGTA CACGAAGTCA 
GAAACGTCTG GATATTTTGC AGTAGATAGT TCCACATTTC AAATAAAGAC AAAGCAAGAC 
CACATTCCTT TAGGATCGAC CTACAAAGTC GCTGTGAAGG TCGTGGATAC CTGCCACAAG 
GAAGCCACTG CCACTGTAAC ACTGTCTGTC TCCAACTCGG ATTTAACGAT GTCAATAACA 
CCTACAACAT CAACTGTTCT TGAAAACTCT TCAGAGGAGC AATGGTTGGC TGATCTGATC 
GTTTCAGACC CAATGAATAG ATACTCCTGT TCTCTACAGA CGGCTAATGT TCCCTTCATT 
GTACGTCAGA ACAGTAGTGG CATTTTAGGG TATAGTCTTT ATCTGCAAAA GTGGCCACAA 
CTTGACAGTT CCGTAACATC AAGTTACAGC TTAAGCGTAC AATGTACCGA CGGGACGAGC 
ACGAAGACAG CCAGTCATAC CGTCAGCGTC ACTGTCAACT CCAAACCCAC CATATCTAAC 
CTAGGTAGTG GAGTTACTGT GACGTTAGAT GCAAGAACAG TTTTGATTGG CCATTTTGTG 
TATAACGTCA CGGCGTCAGA CAGTGAAGGA GATGATATCA GCTTTTCGCT CACATGTAGT 
CCATCGGGAT GCCCATTCAA AATTTATGAC TCCGGTGCTA TATTGCTGAC GTCACGCCTC 
ATAACACATA CTGTAACATC TTATACCTTG ACCGTTCGCG TAAGAGACGC TTACACGTCA 
AGCGCTAATA GAGGAACCCT AACTGTGTCA ATTACAAATA GGAACTCGTC CCCTTCCCTC 
ACCATACCAG TACTGACATC TGTATCGGAG AATTCCCCTC TGGGCCACTC TGTCCTGACG 
GTGACTTCTT CTGACGTAGA ATCCGGGACC TTGTCAGTGT ACGGTGTGTT CACACCGGCC 
TATGGACTCA AGTACTTTGA CCTCAACGAA ACAAGTGGGG TTGTGACTAC ATCAACAGTG 
GAGAATATTG ATTACGACAT TATATCTACA AAAGACATAG TACTGATAGT CTACACGTCT 
GACGGAATCG CCATCACTTC ACAAACGGGA ACCATCCGAA TCGTCGATGT CAACGAACCA 
TGTAATTTTA CTGAAGATTA TTACCGTATT ATTAGAGAGG AGGGCAGTAG CGGATCCACG 
TTTCCTCTGC CAGATTACAA TATCATCGAT CCCGATAACG GGGAAACATT CACTTTCCAG 
AAGACCTGTG CTGGTGTGTT CGATGCGAAA GTCTCTGTGG ACACAAACAC CGGGCAGTTC 
TCATTGTCTG TGGACTACGA TCTCGATGTG CCAGGAACCA GTGCTAGCTT TAATTGCACG 
TTAACTGTTA CTGACTCGGC GGGTCACTCG GACACGGCAG TGGTTGGTGT CTTCATTGAG 
TATAAAAACG AGTTCGCTCC AACGTTCTCA CTTTCTTCTA TTTCCATTAC ACTGCAATCC 
CACGAACTTA TTGGAGCAAT AGTGACAAAT TTCACTGCAC AAGACTATGA TCTTTCAACT 
CAGGACGATG GCAAATTTTA TTACACACTT GATCAATCTT CAAACACAAA GGAATATTTT 
GGAATTATGT CCAATGGGAG TTTATACATC AAAGAAGATT TAACTCCCCT TTATTTAGGA 
AAAACCTTGT CTATGACATT AACGGCAAAA GACTTTGGGA ATCCGAGTAA GCAAAGTTCC 
TTGGCTATAA CTATCCAGAT TCCAATCTCT ACGACCACGT TGGCCTCTGT TTCAACTGAT 
AAATCTTTAA AGTTTGAAGA GGATAACAAA AATGCGGTGC TCGTTTCTCT GGTTGGCCTT 
GCCTCCGTTG CTTTGCTTTG TACATTGTTC GTGTTGATTA CCAAGAATTG TCATCATAAA 
ATGAAAAAAA GTCAACCTAG ATATAATCTA CTCAAGTCTG AACCACCTGC CCAAGAGAAA 
TCCTTAAACA CCGAGGGTGA AGACTTTAAG ATGGTTAAAA ACGAAGCGGG CACTAATAAT 
ACTCATGATA GTAGCAAATC AGAGAGGGAA ACTGACAAAG AACTGATCAA AGAACAAGAC 
AAGTCCTTGT CACACGTCTA TGCTCAAAAT TCAAACAAAG AAGAAAACGA TGATAAGTGG 
TGA