LOC104397600 cDNA ORF clone, Chaetura pelagica(chimney swift)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC104397600
Entrez Gene ID	104397600
Full Name	collagen alpha-4(VI) chain-like
Gene Type	protein-coding
Organism	Chaetura pelagica(chimney swift)

mRNA and Protein(s)

mRNA	Protein	Name
XM_010007600.1	XP_010005902.1	collagen alpha-4(VI) chain-like

Pathways from BioSystems
Gene Ontology

The following LOC104397600 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC104397600 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCh179507	XM_010007600.1 Latest version!	Chaetura pelagica collagen alpha-4(VI) chain-like (LOC104397600), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC104397600 ( XM_010007600.1 ) cDNA ORF clone, Chaetura pelagica(chimney swift) -> XP_010005902.1 Chaetura pelagica collagen alpha-4(VI) chain-like (LOC104397600), mRNA.

Price & Availability↑

CloneID	OCh179507
Clone ID Related Accession (Same CDS sequence)	XM_010007600.1
Accession Version	XM_010007600.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2274bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-10-30
Organism	Chaetura pelagica(chimney swift)
Product	collagen alpha-4(VI) chain-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_009952263.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Chaetura pelagica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 63% of CDS bases ##RefSeq-Attributes-END##

ATGAGTCTGG AAGAAGAAGT AGGCAAACAG AGACTACAGA TGTTAGGAGC TTGCAGAAAA 
GGCACATTGG CAGATGTTGT TTTTTTAGTG GATACTTCAA CAAGTATTGG CCAGGAAAAC 
TTTCAGAAGG TGAAGAACTT CCTCTCCACC TTGGTTTTGA GTCTTGATGT TGGCCTTGAT 
GTGATCCGAG TTGGGCTGGC ACAATACAGT AATGAGACTT ACCAAGAATT CTTGCTGAAC 
CAGTATTTGA AAAGTGATGT TCTGGAGCAA ATTGGGAATT TGCCATATAG AAGTGGAGAA 
CCTTACACAG GGAGAGCTCT GGATTTTGTC AATGAAGTGT ACTTCACTGA ACCTGCTGGT 
AGCAGAGCTA AGGGTTATGT CCCACAGGTA GCCATTCTGA TCACTGGTGG AGAATCCAGC 
GATGAAGTTG AATTGCCTGC TAGAAAACTG AGAAACAGAG GCATCTCCCT CTATGTGGTG 
GGAATTGGTG TCCAGAATAC AACTGAGCTT CAGCAAATAG CCAGCAAACC ATTTGGGAAA 
TATCTGTATA GTGCTGGTAG TTTTGATGAC CTTCAAGATC TCTCCAGAAG ACTTTTGCGA 
AACTTCTGCC TTGCAGTTGA AAATGAGATA GAAGGTTGCG ACATAGGTCT TTCTATAGCT 
ATTGATATTT CAAGACGTGT GCAGCCAGCA TCCACAGTGC TTCTGAAGCA GAAATTGCAA 
GGATTCCTTC CCAGGCTTTT ACTCCAGATG AAGTCGCTGC CAAATATCAC CTGTAATTCT 
GGCTCTCCAG TCAACATTAG ATTCAAGTTC CAAGTACTGG CACAGACCAA ACTATTAATC 
TTTGACTCTG ATTTTGAAGT CTATAATGAA GACATCATCC AGAAGTTCTT AGATGCACAG 
ACCACTGTGG ACACCTACCT GAATGCAGAC TTCTTACAGG CACTTGAGGA TAAGTTCTTC 
AGTGTGACCT CTGCTAAAGT GAAGGTTCTG TTAGTATTTT CAGATGGCCT GGATGATTCA 
CTGGAAGATC TCAGAAGAGC AGTTGACTCC CTTCGCTTTA AAGGTCTTGA TGCACTTCTA 
TTAATTGGCC TGGACAATGC ACAAAACTTG ACTGAACTTC GGGAAATAGA GTTTGGCAGA 
GGATTTGGCT ATAATGAACC TCTGAGTGTT GGCTTTGCAG ATATTGCTGG TGTCTTGCAG 
AGAAACCTTG ATACTGTTGC AGAAAGGAAA TGCTGCAACG TTTTTTGTAA ATGCCTTGGA 
GAAAATGGTG ATCGTGGTGG CCAAGGAAGT CCTGGGACAA AAGGAAGTAC AGGTTACAGA 
GGATCTCCTG GCCATCCTGG TGAGGAAGGT TGGATTGGGG AGAGAGGCCC AGCTGGTTTC 
AATGGGAGTC AAGGAGACAG GGGATGTCCA GGGGTCAGAG GCAAAAAGGG GGGCAGAGGC 
TATAGAGGAA GTCAGCCATT GAAAACAACT ATTCTTATTC AGCTTTCCAA AAACAGGGTG 
AACACTTCTT CTCTTGCTCA AAGAGGCAAG TGGGCTGATG CTAATAGGGT TTTTATGTGC 
TTATTGCTGC AGGGTGAACA TGGTGACAGT GGATTTGATG GCACTAATGG AGAGCAGGGC 
AGAAAAGGCC CCAGAGGAGA ACCAGGGGAA CGAGGAGAAT CTGGTCTAAG AGGAGATCAT 
GGAGATCCTG GGACTAGCAG TAATGTTCCT GGTCCTAAGG GTGAAAAGGG AAACCTGTCA 
CAGCAGGGAG ACCCAGGACC ACAAGGACTC CAAGGGGAGC AGGGTGATGC TGGTCCTGAT 
GTAAGAACAG TAGTTGATGC AGGTGCAGCA GGTCGAAGAG GCCCTCCAGG TGTAAAGGGT 
GAGCAAGGAG ATCTGGGGGA AGCAGGCTTT CCAGGAGACT CTGGTCTTCC AGGCCCACAG 
GGCTCAAGAG GAGTACAAGG GATCCGAGGA CCTCCAGGAC CACAAGGCAT GCCGGGCCCA 
GTGGCAGGTA TGGGGCCCCC TGGTCCACCT GGTTCTGTTG GGAAGATAGG TGCAAGAGGA 
GCAAAGACCG GTTTTGTGCT GTTTAATTTT GAGGTTCTTG TTAGAAGAAA GTTCATTAAG 
AAAGTTCAAA CGAAAAAAGG AGCTAAAGAA AATAAAACAT GCAAGAGACC TAAGAGCACA 
ATGCAGACAA ACTGCCTGAG AAATATTGTC TGCTATCAAC AGACACTTCA GGCTGGTAGA 
ATTCCAGTTT ACATCCTGCG ACCATTAATA GAAATGTTTC CAGAAAACTG GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010005902.1
CDS	1..2274
Translation	MSLEEEVGKQRLQMLGACRKGTLADVVFLVDTSTSIGQENFQKVKNFLSTLVLSLDVGLDVIRVGLAQYSNETYQEFLLNQYLKSDVLEQIGNLPYRSGEPYTGRALDFVNEVYFTEPAGSRAKGYVPQVAILITGGESSDEVELPARKLRNRGISLYVVGIGVQNTTELQQIASKPFGKYLYSAGSFDDLQDLSRRLLRNFCLAVENEIEGCDIGLSIAIDISRRVQPASTVLLKQKLQGFLPRLLLQMKSLPNITCNSGSPVNIRFKFQVLAQTKLLIFDSDFEVYNEDIIQKFLDAQTTVDTYLNADFLQALEDKFFSVTSAKVKVLLVFSDGLDDSLEDLRRAVDSLRFKGLDALLLIGLDNAQNLTELREIEFGRGFGYNEPLSVGFADIAGVLQRNLDTVAERKCCNVFCKCLGENGDRGGQGSPGTKGSTGYRGSPGHPGEEGWIGERGPAGFNGSQGDRGCPGVRGKKGGRGYRGSQPLKTTILIQLSKNRVNTSSLAQRGKWADANRVFMCLLLQGEHGDSGFDGTNGEQGRKGPRGEPGERGESGLRGDHGDPGTSSNVPGPKGEKGNLSQQGDPGPQGLQGEQGDAGPDVRTVVDAGAAGRRGPPGVKGEQGDLGEAGFPGDSGLPGPQGSRGVQGIRGPPGPQGMPGPVAGMGPPGPPGSVGKIGARGAKTGFVLFNFEVLVRRKFIKKVQTKKGAKENKTCKRPKSTMQTNCLRNIVCYQQTLQAGRIPVYILRPLIEMFPENW

Target ORF information:

RefSeq Version	XM_010007600.1
Organism	Chaetura pelagica(chimney swift)
Definition	Chaetura pelagica collagen alpha-4(VI) chain-like (LOC104397600), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010007600.1

ORF Insert Sequence:

ATGAGTCTGG AAGAAGAAGT AGGCAAACAG AGACTACAGA TGTTAGGAGC TTGCAGAAAA 
GGCACATTGG CAGATGTTGT TTTTTTAGTG GATACTTCAA CAAGTATTGG CCAGGAAAAC 
TTTCAGAAGG TGAAGAACTT CCTCTCCACC TTGGTTTTGA GTCTTGATGT TGGCCTTGAT 
GTGATCCGAG TTGGGCTGGC ACAATACAGT AATGAGACTT ACCAAGAATT CTTGCTGAAC 
CAGTATTTGA AAAGTGATGT TCTGGAGCAA ATTGGGAATT TGCCATATAG AAGTGGAGAA 
CCTTACACAG GGAGAGCTCT GGATTTTGTC AATGAAGTGT ACTTCACTGA ACCTGCTGGT 
AGCAGAGCTA AGGGTTATGT CCCACAGGTA GCCATTCTGA TCACTGGTGG AGAATCCAGC 
GATGAAGTTG AATTGCCTGC TAGAAAACTG AGAAACAGAG GCATCTCCCT CTATGTGGTG 
GGAATTGGTG TCCAGAATAC AACTGAGCTT CAGCAAATAG CCAGCAAACC ATTTGGGAAA 
TATCTGTATA GTGCTGGTAG TTTTGATGAC CTTCAAGATC TCTCCAGAAG ACTTTTGCGA 
AACTTCTGCC TTGCAGTTGA AAATGAGATA GAAGGTTGCG ACATAGGTCT TTCTATAGCT 
ATTGATATTT CAAGACGTGT GCAGCCAGCA TCCACAGTGC TTCTGAAGCA GAAATTGCAA 
GGATTCCTTC CCAGGCTTTT ACTCCAGATG AAGTCGCTGC CAAATATCAC CTGTAATTCT 
GGCTCTCCAG TCAACATTAG ATTCAAGTTC CAAGTACTGG CACAGACCAA ACTATTAATC 
TTTGACTCTG ATTTTGAAGT CTATAATGAA GACATCATCC AGAAGTTCTT AGATGCACAG 
ACCACTGTGG ACACCTACCT GAATGCAGAC TTCTTACAGG CACTTGAGGA TAAGTTCTTC 
AGTGTGACCT CTGCTAAAGT GAAGGTTCTG TTAGTATTTT CAGATGGCCT GGATGATTCA 
CTGGAAGATC TCAGAAGAGC AGTTGACTCC CTTCGCTTTA AAGGTCTTGA TGCACTTCTA 
TTAATTGGCC TGGACAATGC ACAAAACTTG ACTGAACTTC GGGAAATAGA GTTTGGCAGA 
GGATTTGGCT ATAATGAACC TCTGAGTGTT GGCTTTGCAG ATATTGCTGG TGTCTTGCAG 
AGAAACCTTG ATACTGTTGC AGAAAGGAAA TGCTGCAACG TTTTTTGTAA ATGCCTTGGA 
GAAAATGGTG ATCGTGGTGG CCAAGGAAGT CCTGGGACAA AAGGAAGTAC AGGTTACAGA 
GGATCTCCTG GCCATCCTGG TGAGGAAGGT TGGATTGGGG AGAGAGGCCC AGCTGGTTTC 
AATGGGAGTC AAGGAGACAG GGGATGTCCA GGGGTCAGAG GCAAAAAGGG GGGCAGAGGC 
TATAGAGGAA GTCAGCCATT GAAAACAACT ATTCTTATTC AGCTTTCCAA AAACAGGGTG 
AACACTTCTT CTCTTGCTCA AAGAGGCAAG TGGGCTGATG CTAATAGGGT TTTTATGTGC 
TTATTGCTGC AGGGTGAACA TGGTGACAGT GGATTTGATG GCACTAATGG AGAGCAGGGC 
AGAAAAGGCC CCAGAGGAGA ACCAGGGGAA CGAGGAGAAT CTGGTCTAAG AGGAGATCAT 
GGAGATCCTG GGACTAGCAG TAATGTTCCT GGTCCTAAGG GTGAAAAGGG AAACCTGTCA 
CAGCAGGGAG ACCCAGGACC ACAAGGACTC CAAGGGGAGC AGGGTGATGC TGGTCCTGAT 
GTAAGAACAG TAGTTGATGC AGGTGCAGCA GGTCGAAGAG GCCCTCCAGG TGTAAAGGGT 
GAGCAAGGAG ATCTGGGGGA AGCAGGCTTT CCAGGAGACT CTGGTCTTCC AGGCCCACAG 
GGCTCAAGAG GAGTACAAGG GATCCGAGGA CCTCCAGGAC CACAAGGCAT GCCGGGCCCA 
GTGGCAGGTA TGGGGCCCCC TGGTCCACCT GGTTCTGTTG GGAAGATAGG TGCAAGAGGA 
GCAAAGACCG GTTTTGTGCT GTTTAATTTT GAGGTTCTTG TTAGAAGAAA GTTCATTAAG 
AAAGTTCAAA CGAAAAAAGG AGCTAAAGAA AATAAAACAT GCAAGAGACC TAAGAGCACA 
ATGCAGACAA ACTGCCTGAG AAATATTGTC TGCTATCAAC AGACACTTCA GGCTGGTAGA 
ATTCCAGTTT ACATCCTGCG ACCATTAATA GAAATGTTTC CAGAAAACTG GTAA