LOC101408171 cDNA ORF clone, Ceratotherium simum simum(southern white rhinoceros)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC101408171
Entrez Gene ID	101408171
Full Name	C-X3-C motif chemokine receptor 1
Synonyms	CX3CR1
Gene Type	protein-coding
Organism	Ceratotherium simum simum(southern white rhinoceros)

mRNA and Protein(s)

mRNA	Protein	Name
XM_014790734.1	XP_014646220.1	CX3C chemokine receptor 1
XM_004419535.2	XP_004419592.1	CX3C chemokine receptor 1

Pathways from BioSystems
Gene Ontology

The following LOC101408171 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC101408171 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCe47840	XM_014790734.1 Latest version!	Ceratotherium simum simum chemokine (C-X3-C motif) receptor 1 (LOC101408171), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OCe47840	XM_004419535.2 Latest version!	Ceratotherium simum simum chemokine (C-X3-C motif) receptor 1 (LOC101408171), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC101408171 ( XM_014790734.1 ) cDNA ORF clone, Ceratotherium simum simum(southern white rhinoceros) -> XP_014646220.1 Ceratotherium simum simum chemokine (C-X3-C motif) receptor 1 (LOC101408171), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OCe47840
Clone ID Related Accession (Same CDS sequence)	XM_014790734.1 , XM_004419535.2
Accession Version	XM_014790734.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1071bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-11-26
Organism	Ceratotherium simum simum(southern white rhinoceros)
Product	CX3C chemokine receptor 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004454158.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ceratotherium simum simum Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCCACCC TCCCTGCTGA ATTCACCACA GAATACTTGC AGTATGATGA GTTTGCGGAA 
GCCTGTAACA TGGAGGACGT CGTGGCCTTT GGGACTGTCT TCCTGTCCAT AGTCTACTCT 
CTTGTATTTG CCTTTGGCCT GGTGGGAAAT TTGCTGGTGG TGTTTGCCCT CAGAAACAGC 
CAGAAGCCCA AGAGTATCAC CGACATTTAC CTCCTGAACC TGGCCTTGTC CGATCTGCTC 
TTTGTAGCCA CTTTGCCCTT CTGGACTCAC TATGTGATAA GTGAACAAGG CTTTCACAAC 
GCTATGTGCA AACTCACCGC CACCTTCTTC TTCATCGGCT TTTTTGGAGG CATATTCTTC 
ATCACCACCA TCAGCATCGA TAGGTACCTG GCCATTGTCC TGGCCGCCAG CTCCATGAAC 
AACCGGACCG TGCAGCATGG CGTCACCATC AGCCTGGGCA TTTGGGCAGC AGCCATCTTG 
GTGGCAGCAC CCCAGTTCAT GTTCACAAAA AGCAAAGAAA ATGAATGCCT CGGGGACTAC 
CCCGAGGTCC TGCAGGACAT CTGGCCCGTG CTCCGCAACG TAGAAACAAA TGTTCTTGGC 
TTCCTGCTCC CCCTGCTCAT TATGAGTTAC TGTTACTTCA AAATCATGCG GACACTGTTT 
TCCTGCAAGA ACCACAAGAA AGCTAGAGCC ATTAAACTGA TCTTTCTGGT GGTCATCGTG 
TTTTTCCTCT TCTGGACACC CTACAACATT ATGATTTTCT TAGAGACACT CAATCTCTAC 
AACTTCTTTC CCAATTGTGA CATGAAGAGG GATCTGAAAC GGGCCCTCAG TGTGACCGAG 
ACAATAGCAT TTATCCACTG TTGCCTCAAT CCCCTTATCT ATGCCTTTGC TGGAGAGAAG 
TTCAGAAGAT ACCTTTACCA CCTGTATCGG AAATTCCTGG CTGTCCTGTG TTGTCGTCCC 
GTCCACGCCA GTTTCTCCCA GTCTGAATCA CAAACGAGCA AGCGGGAAAG CATTCTGAGC 
AGCAATTTTA CCCACTACAC CAGTGATGGA GATGCGTCCA TCTTTCTCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014646220.1
CDS	187..1257
Translation	MPTLPAEFTTEYLQYDEFAEACNMEDVVAFGTVFLSIVYSLVFAFGLVGNLLVVFALRNSQKPKSITDIYLLNLALSDLLFVATLPFWTHYVISEQGFHNAMCKLTATFFFIGFFGGIFFITTISIDRYLAIVLAASSMNNRTVQHGVTISLGIWAAAILVAAPQFMFTKSKENECLGDYPEVLQDIWPVLRNVETNVLGFLLPLLIMSYCYFKIMRTLFSCKNHKKARAIKLIFLVVIVFFLFWTPYNIMIFLETLNLYNFFPNCDMKRDLKRALSVTETIAFIHCCLNPLIYAFAGEKFRRYLYHLYRKFLAVLCCRPVHASFSQSESQTSKRESILSSNFTHYTSDGDASIFL

Target ORF information:

RefSeq Version	XM_014790734.1
Organism	Ceratotherium simum simum(southern white rhinoceros)
Definition	Ceratotherium simum simum chemokine (C-X3-C motif) receptor 1 (LOC101408171), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014790734.1

ORF Insert Sequence:

ATGCCCACCC TCCCTGCTGA ATTCACCACA GAATACTTGC AGTATGATGA GTTTGCGGAA 
GCCTGTAACA TGGAGGACGT CGTGGCCTTT GGGACTGTCT TCCTGTCCAT AGTCTACTCT 
CTTGTATTTG CCTTTGGCCT GGTGGGAAAT TTGCTGGTGG TGTTTGCCCT CAGAAACAGC 
CAGAAGCCCA AGAGTATCAC CGACATTTAC CTCCTGAACC TGGCCTTGTC CGATCTGCTC 
TTTGTAGCCA CTTTGCCCTT CTGGACTCAC TATGTGATAA GTGAACAAGG CTTTCACAAC 
GCTATGTGCA AACTCACCGC CACCTTCTTC TTCATCGGCT TTTTTGGAGG CATATTCTTC 
ATCACCACCA TCAGCATCGA TAGGTACCTG GCCATTGTCC TGGCCGCCAG CTCCATGAAC 
AACCGGACCG TGCAGCATGG CGTCACCATC AGCCTGGGCA TTTGGGCAGC AGCCATCTTG 
GTGGCAGCAC CCCAGTTCAT GTTCACAAAA AGCAAAGAAA ATGAATGCCT CGGGGACTAC 
CCCGAGGTCC TGCAGGACAT CTGGCCCGTG CTCCGCAACG TAGAAACAAA TGTTCTTGGC 
TTCCTGCTCC CCCTGCTCAT TATGAGTTAC TGTTACTTCA AAATCATGCG GACACTGTTT 
TCCTGCAAGA ACCACAAGAA AGCTAGAGCC ATTAAACTGA TCTTTCTGGT GGTCATCGTG 
TTTTTCCTCT TCTGGACACC CTACAACATT ATGATTTTCT TAGAGACACT CAATCTCTAC 
AACTTCTTTC CCAATTGTGA CATGAAGAGG GATCTGAAAC GGGCCCTCAG TGTGACCGAG 
ACAATAGCAT TTATCCACTG TTGCCTCAAT CCCCTTATCT ATGCCTTTGC TGGAGAGAAG 
TTCAGAAGAT ACCTTTACCA CCTGTATCGG AAATTCCTGG CTGTCCTGTG TTGTCGTCCC 
GTCCACGCCA GTTTCTCCCA GTCTGAATCA CAAACGAGCA AGCGGGAAAG CATTCTGAGC 
AGCAATTTTA CCCACTACAC CAGTGATGGA GATGCGTCCA TCTTTCTCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC101408171 ( XM_004419535.2 ) cDNA ORF clone, Ceratotherium simum simum(southern white rhinoceros) -> XP_004419592.1 Ceratotherium simum simum chemokine (C-X3-C motif) receptor 1 (LOC101408171), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OCe47840
Clone ID Related Accession (Same CDS sequence)	XM_014790734.1 , XM_004419535.2
Accession Version	XM_004419535.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1071bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-11-26
Organism	Ceratotherium simum simum(southern white rhinoceros)
Product	CX3C chemokine receptor 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004454158.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Nov 27, 2015 this sequence version replaced XM_004419535.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ceratotherium simum simum Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCCACCC TCCCTGCTGA ATTCACCACA GAATACTTGC AGTATGATGA GTTTGCGGAA 
GCCTGTAACA TGGAGGACGT CGTGGCCTTT GGGACTGTCT TCCTGTCCAT AGTCTACTCT 
CTTGTATTTG CCTTTGGCCT GGTGGGAAAT TTGCTGGTGG TGTTTGCCCT CAGAAACAGC 
CAGAAGCCCA AGAGTATCAC CGACATTTAC CTCCTGAACC TGGCCTTGTC CGATCTGCTC 
TTTGTAGCCA CTTTGCCCTT CTGGACTCAC TATGTGATAA GTGAACAAGG CTTTCACAAC 
GCTATGTGCA AACTCACCGC CACCTTCTTC TTCATCGGCT TTTTTGGAGG CATATTCTTC 
ATCACCACCA TCAGCATCGA TAGGTACCTG GCCATTGTCC TGGCCGCCAG CTCCATGAAC 
AACCGGACCG TGCAGCATGG CGTCACCATC AGCCTGGGCA TTTGGGCAGC AGCCATCTTG 
GTGGCAGCAC CCCAGTTCAT GTTCACAAAA AGCAAAGAAA ATGAATGCCT CGGGGACTAC 
CCCGAGGTCC TGCAGGACAT CTGGCCCGTG CTCCGCAACG TAGAAACAAA TGTTCTTGGC 
TTCCTGCTCC CCCTGCTCAT TATGAGTTAC TGTTACTTCA AAATCATGCG GACACTGTTT 
TCCTGCAAGA ACCACAAGAA AGCTAGAGCC ATTAAACTGA TCTTTCTGGT GGTCATCGTG 
TTTTTCCTCT TCTGGACACC CTACAACATT ATGATTTTCT TAGAGACACT CAATCTCTAC 
AACTTCTTTC CCAATTGTGA CATGAAGAGG GATCTGAAAC GGGCCCTCAG TGTGACCGAG 
ACAATAGCAT TTATCCACTG TTGCCTCAAT CCCCTTATCT ATGCCTTTGC TGGAGAGAAG 
TTCAGAAGAT ACCTTTACCA CCTGTATCGG AAATTCCTGG CTGTCCTGTG TTGTCGTCCC 
GTCCACGCCA GTTTCTCCCA GTCTGAATCA CAAACGAGCA AGCGGGAAAG CATTCTGAGC 
AGCAATTTTA CCCACTACAC CAGTGATGGA GATGCGTCCA TCTTTCTCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_004419592.1
CDS	131..1201
Translation	MPTLPAEFTTEYLQYDEFAEACNMEDVVAFGTVFLSIVYSLVFAFGLVGNLLVVFALRNSQKPKSITDIYLLNLALSDLLFVATLPFWTHYVISEQGFHNAMCKLTATFFFIGFFGGIFFITTISIDRYLAIVLAASSMNNRTVQHGVTISLGIWAAAILVAAPQFMFTKSKENECLGDYPEVLQDIWPVLRNVETNVLGFLLPLLIMSYCYFKIMRTLFSCKNHKKARAIKLIFLVVIVFFLFWTPYNIMIFLETLNLYNFFPNCDMKRDLKRALSVTETIAFIHCCLNPLIYAFAGEKFRRYLYHLYRKFLAVLCCRPVHASFSQSESQTSKRESILSSNFTHYTSDGDASIFL

Target ORF information:

RefSeq Version	XM_004419535.2
Organism	Ceratotherium simum simum(southern white rhinoceros)
Definition	Ceratotherium simum simum chemokine (C-X3-C motif) receptor 1 (LOC101408171), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_004419535.2

ORF Insert Sequence:

ATGCCCACCC TCCCTGCTGA ATTCACCACA GAATACTTGC AGTATGATGA GTTTGCGGAA 
GCCTGTAACA TGGAGGACGT CGTGGCCTTT GGGACTGTCT TCCTGTCCAT AGTCTACTCT 
CTTGTATTTG CCTTTGGCCT GGTGGGAAAT TTGCTGGTGG TGTTTGCCCT CAGAAACAGC 
CAGAAGCCCA AGAGTATCAC CGACATTTAC CTCCTGAACC TGGCCTTGTC CGATCTGCTC 
TTTGTAGCCA CTTTGCCCTT CTGGACTCAC TATGTGATAA GTGAACAAGG CTTTCACAAC 
GCTATGTGCA AACTCACCGC CACCTTCTTC TTCATCGGCT TTTTTGGAGG CATATTCTTC 
ATCACCACCA TCAGCATCGA TAGGTACCTG GCCATTGTCC TGGCCGCCAG CTCCATGAAC 
AACCGGACCG TGCAGCATGG CGTCACCATC AGCCTGGGCA TTTGGGCAGC AGCCATCTTG 
GTGGCAGCAC CCCAGTTCAT GTTCACAAAA AGCAAAGAAA ATGAATGCCT CGGGGACTAC 
CCCGAGGTCC TGCAGGACAT CTGGCCCGTG CTCCGCAACG TAGAAACAAA TGTTCTTGGC 
TTCCTGCTCC CCCTGCTCAT TATGAGTTAC TGTTACTTCA AAATCATGCG GACACTGTTT 
TCCTGCAAGA ACCACAAGAA AGCTAGAGCC ATTAAACTGA TCTTTCTGGT GGTCATCGTG 
TTTTTCCTCT TCTGGACACC CTACAACATT ATGATTTTCT TAGAGACACT CAATCTCTAC 
AACTTCTTTC CCAATTGTGA CATGAAGAGG GATCTGAAAC GGGCCCTCAG TGTGACCGAG 
ACAATAGCAT TTATCCACTG TTGCCTCAAT CCCCTTATCT ATGCCTTTGC TGGAGAGAAG 
TTCAGAAGAT ACCTTTACCA CCTGTATCGG AAATTCCTGG CTGTCCTGTG TTGTCGTCCC 
GTCCACGCCA GTTTCTCCCA GTCTGAATCA CAAACGAGCA AGCGGGAAAG CATTCTGAGC 
AGCAATTTTA CCCACTACAC CAGTGATGGA GATGCGTCCA TCTTTCTCTG A