LOC107879773 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107879773
Entrez Gene ID	107879773
Full Name	polygalacturonase-like
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016726724.1	XP_016582210.1	polygalacturonase-like

Pathways from BioSystems
Gene Ontology

The following LOC107879773 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107879773 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa109597	XM_016726724.1 Latest version!	Capsicum annuum polygalacturonase-like (LOC107879773), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107879773 ( XM_016726724.1 ) cDNA ORF clone, Capsicum annuum -> XP_016582210.1 Capsicum annuum polygalacturonase-like (LOC107879773), mRNA.

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CloneID	OCa109597
Clone ID Related Accession (Same CDS sequence)	XM_016726724.1
Accession Version	XM_016726724.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1194bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	polygalacturonase-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029984.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGTTTCT TTTCTCTTCT CCCACTTATT CTCGTGAACA TAATAATCAT CTTCTTATTC 
AACTTGTCAA CAGCTGCAGA TTCCACATAC AATGTCCAAA ACTATGGAGC CAAATCCGAT 
GGAATATCGG ATTCGTCCAA GGCCTTCGTT AGTGCATGGA CTGCAGCATG TGCATCTACT 
AGCCCAGCCA CCATTTACGT GCCAAAGGGA AGTTACCTTC TTGGTAATGC ATATTTCTAT 
GGTCAGACGT GCAAGAGTAA TGCCATAACT ATACGCATTG ACGGCACACT TGTAGCTCCT 
TCTGACTATA ATGTTATTGG CAAATCTGGG AATTGGATTA AATTCGAAAG AGTCACTGGA 
GTTTCTATCA TTGGTGGATC CCTTGACGGC CAAGGTACCA GTCTTTGGGC ATGCAAAAAC 
TCTGGGAAAG GTTGTCCTAA AGGAGTCACG ACATTAGCTT TTTACAACTC AAACAACATT 
GCAATAAGTG AATTAACTTC ACAAGACAGC CAAATGTTCC ACATTTTGTT AGACGGCTGC 
CATAATGTGG AGTTACAAGG CGTGAAGGTT TCAGCTCCTC AAAACAGTCC CAACACTGAT 
GGAATTCATT TACAGTCATC TTCGGATGTT ACCATCCTGA ATTCCCAAAT AGGGACAGGA 
GATGATTGTC TCTCAATTGG TCCTGGCAAC TCCAACTTGT GGATCGAAAA CATTGTCTGC 
GGCCCTGGCC ATGGAATAAG CATTGGGAGC TTAGGTTGGG ATATACAAGA GCCAGGAGTA 
CAAAATGTGA CAGTAAGAAG AGCAGCTTTT AGTGAGACTC AAAATGGTGT GAGGGTCAAA 
ACATGGGCAA GGCCGAGCAA TGGATTTGTT AGGAATGTTC TTTTTCAACA TGTAGTTATG 
AATAACGTCG AAAATCCCAT CATCATAGAT CAAAATTACT GCCCTGGCAG TGGAAATTGT 
CCTGAGGAGG GCTCAGGCAT CAGGGTTAGT GAAATAACAT ATCAGGATGT ACACGGAACA 
TCGGCTACAG AAGTTGCAGT GAAATTCGAC TGTAGCAAAA TAAATCCATG TAATGGGATA 
ACGCTACTGG ACGTGAAACT CAGTTATAAA AATCAACCAG CCGAAGCTTC ATGTGTTAAT 
GCTGAAGGAA AGGCGTCTGG TCTACAACAA CCAACTAGCT GTTTACAACT TTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016582210.1
CDS	7..1200
Translation	MSFFSLLPLILVNIIIIFLFNLSTAADSTYNVQNYGAKSDGISDSSKAFVSAWTAACASTSPATIYVPKGSYLLGNAYFYGQTCKSNAITIRIDGTLVAPSDYNVIGKSGNWIKFERVTGVSIIGGSLDGQGTSLWACKNSGKGCPKGVTTLAFYNSNNIAISELTSQDSQMFHILLDGCHNVELQGVKVSAPQNSPNTDGIHLQSSSDVTILNSQIGTGDDCLSIGPGNSNLWIENIVCGPGHGISIGSLGWDIQEPGVQNVTVRRAAFSETQNGVRVKTWARPSNGFVRNVLFQHVVMNNVENPIIIDQNYCPGSGNCPEEGSGIRVSEITYQDVHGTSATEVAVKFDCSKINPCNGITLLDVKLSYKNQPAEASCVNAEGKASGLQQPTSCLQL

Target ORF information:

RefSeq Version	XM_016726724.1
Organism	Capsicum annuum
Definition	Capsicum annuum polygalacturonase-like (LOC107879773), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016726724.1

ORF Insert Sequence:

ATGAGTTTCT TTTCTCTTCT CCCACTTATT CTCGTGAACA TAATAATCAT CTTCTTATTC 
AACTTGTCAA CAGCTGCAGA TTCCACATAC AATGTCCAAA ACTATGGAGC CAAATCCGAT 
GGAATATCGG ATTCGTCCAA GGCCTTCGTT AGTGCATGGA CTGCAGCATG TGCATCTACT 
AGCCCAGCCA CCATTTACGT GCCAAAGGGA AGTTACCTTC TTGGTAATGC ATATTTCTAT 
GGTCAGACGT GCAAGAGTAA TGCCATAACT ATACGCATTG ACGGCACACT TGTAGCTCCT 
TCTGACTATA ATGTTATTGG CAAATCTGGG AATTGGATTA AATTCGAAAG AGTCACTGGA 
GTTTCTATCA TTGGTGGATC CCTTGACGGC CAAGGTACCA GTCTTTGGGC ATGCAAAAAC 
TCTGGGAAAG GTTGTCCTAA AGGAGTCACG ACATTAGCTT TTTACAACTC AAACAACATT 
GCAATAAGTG AATTAACTTC ACAAGACAGC CAAATGTTCC ACATTTTGTT AGACGGCTGC 
CATAATGTGG AGTTACAAGG CGTGAAGGTT TCAGCTCCTC AAAACAGTCC CAACACTGAT 
GGAATTCATT TACAGTCATC TTCGGATGTT ACCATCCTGA ATTCCCAAAT AGGGACAGGA 
GATGATTGTC TCTCAATTGG TCCTGGCAAC TCCAACTTGT GGATCGAAAA CATTGTCTGC 
GGCCCTGGCC ATGGAATAAG CATTGGGAGC TTAGGTTGGG ATATACAAGA GCCAGGAGTA 
CAAAATGTGA CAGTAAGAAG AGCAGCTTTT AGTGAGACTC AAAATGGTGT GAGGGTCAAA 
ACATGGGCAA GGCCGAGCAA TGGATTTGTT AGGAATGTTC TTTTTCAACA TGTAGTTATG 
AATAACGTCG AAAATCCCAT CATCATAGAT CAAAATTACT GCCCTGGCAG TGGAAATTGT 
CCTGAGGAGG GCTCAGGCAT CAGGGTTAGT GAAATAACAT ATCAGGATGT ACACGGAACA 
TCGGCTACAG AAGTTGCAGT GAAATTCGAC TGTAGCAAAA TAAATCCATG TAATGGGATA 
ACGCTACTGG ACGTGAAACT CAGTTATAAA AATCAACCAG CCGAAGCTTC ATGTGTTAAT 
GCTGAAGGAA AGGCGTCTGG TCTACAACAA CCAACTAGCT GTTTACAACT TTGA