LOC107859949 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107859949
Entrez Gene ID	107859949
Full Name	U1 small nuclear ribonucleoprotein 70 kDa
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016705118.1	XP_016560604.1	U1 small nuclear ribonucleoprotein 70 kDa

Pathways from BioSystems
Gene Ontology

The following LOC107859949 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107859949 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa93242	XM_016705118.1 Latest version!	Capsicum annuum U1 small nuclear ribonucleoprotein 70 kDa (LOC107859949), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107859949 ( XM_016705118.1 ) cDNA ORF clone, Capsicum annuum -> XP_016560604.1 Capsicum annuum U1 small nuclear ribonucleoprotein 70 kDa (LOC107859949), mRNA.

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CloneID	OCa93242
Clone ID Related Accession (Same CDS sequence)	XM_016705118.1
Accession Version	XM_016705118.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1431bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	U1 small nuclear ribonucleoprotein 70 kDa
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029978.1) and transcript sequence (JW068018.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases assembly gap :: added 114 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGGAGACT TCAACGATGC CTTTATGCGC AATAACCCTA ACGTTCAGGC CCGTGCAAAG 
GCTCAGAATC GTGCTAATGT CATGCAACTC AAGCTCATTG GTCAAAGTCA TCCAACTGGG 
TTGACTGCTA ATCTTCTGAA GCTGTTTGAG CCCCGGCCAC CTTTGGAGTA CAAACCCCCC 
CCCGAGAAGA GAAAGTGTCC TTCATATACA GGGATGGCGC AATTTGTTAG TAACTTTGCT 
CAACCTGGTG ATCCGGAATA TGCTCCACCT GTCCCTGAGG TTGAAACCCC GGCTGAACGA 
AGAGCTAGGA TCCACAAGAT ACGGCTGGAG GAAGGTGCCA AAAAGGCTGC TGAAGAGCTT 
GAGAAATATG ATCCTAGCAA TGACCCAAAT GTTACTGGAG ATCCATACAA GACGCTCTTT 
GTTGCAAGAC TTAACTATGA GACAACAGAA AGCAGAGTTA AACGTGAATT TGAGGCTTTT 
GGTCCAATCA AGCGGGTTCG CTTGGTTATG GACAAGACAA ACAATAAACC CAGGGGCTAT 
GCTTTCATTG AGTATGTGCA TACACGGGAT ATGAAAGCTG CATATAAACA AGCTGATGGA 
AAGAAGATCG ATAATAGAAG AGTGCTGGTT GATGTTGAAC GTGGGAGAAC AGTCCCCAAT 
TGGCGTCCCC GCAGACTTGG CGGTGGACTT GGAACGACAA GAGTTGGAAA TGAAGATGTC 
AATAGAGAGG TTGTTCAGCC TGGAAGGGCA GCATCTCGCT CTGAAGAGCC AAGAGCACGA 
GATGACAGGG ACAGGGATCG GGAGAAGTCC CGCGAAAGGG TGCGGGATAG GGACAGAGAG 
AAATCTCGTG AGCGTTCTCA TGATAGGCCA AGAGAACGTG AAAGAGATGA CAAACATCAC 
AGGGAACGCG AGAGAACTAG GGAAAGAGAA AAAGATCGCG GACGAGACCG TGATCGAGAC 
CGTGAACGTG ATAGAACACG TGACCGCGAG AGAGGCAAAG ACAGAGACCG GGATCGTGAC 
CGTGAGCGAG ATCGCCACCG TGAGAGGGAT AGTGAAAGAG GTAAGGATGA AGGTGAGGTG 
GACCAGGGTC GTGGTCGTTC TCGTGATAGA GAATATGATC ATGAGCATGT TGAATCAAAA 
CATGAGCGGG GAAGGCACGG TGACAAAGAA AGGAACTATA ATCATGCTGA ACCTGAAGAT 
GATCATGCAC ATTATGAATA TTATGATCAT CACCAAGGTC GAGGAGACTA CGAGAATCCA 
GATGCACATG GTGGTGATGA TCGCTATAAA GATGCCAGTC ATGGTCATGA TCGTTATGAT 
CAAATGGAAG AGGATAATTA TGCATATGAC CATGGGGCAT CTGAGGCAAA AGAAAGGGAC 
CAAGATTACA AGCGTTCAGA CAGGTCACAT TCTCGTGAAT ATGACTACTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016560604.1
CDS	179..1609
Translation	MGDFNDAFMRNNPNVQARAKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPSYTGMAQFVSNFAQPGDPEYAPPVPEVETPAERRARIHKIRLEEGAKKAAEELEKYDPSNDPNVTGDPYKTLFVARLNYETTESRVKREFEAFGPIKRVRLVMDKTNNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGNEDVNREVVQPGRAASRSEEPRARDDRDRDREKSRERVRDRDREKSRERSHDRPRERERDDKHHRERERTREREKDRGRDRDRDRERDRTRDRERGKDRDRDRDRERDRHRERDSERGKDEGEVDQGRGRSRDREYDHEHVESKHERGRHGDKERNYNHAEPEDDHAHYEYYDHHQGRGDYENPDAHGGDDRYKDASHGHDRYDQMEEDNYAYDHGASEAKERDQDYKRSDRSHSREYDY

Target ORF information:

RefSeq Version	XM_016705118.1
Organism	Capsicum annuum
Definition	Capsicum annuum U1 small nuclear ribonucleoprotein 70 kDa (LOC107859949), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016705118.1

ORF Insert Sequence:

ATGGGAGACT TCAACGATGC CTTTATGCGC AATAACCCTA ACGTTCAGGC CCGTGCAAAG 
GCTCAGAATC GTGCTAATGT CATGCAACTC AAGCTCATTG GTCAAAGTCA TCCAACTGGG 
TTGACTGCTA ATCTTCTGAA GCTGTTTGAG CCCCGGCCAC CTTTGGAGTA CAAACCCCCC 
CCCGAGAAGA GAAAGTGTCC TTCATATACA GGGATGGCGC AATTTGTTAG TAACTTTGCT 
CAACCTGGTG ATCCGGAATA TGCTCCACCT GTCCCTGAGG TTGAAACCCC GGCTGAACGA 
AGAGCTAGGA TCCACAAGAT ACGGCTGGAG GAAGGTGCCA AAAAGGCTGC TGAAGAGCTT 
GAGAAATATG ATCCTAGCAA TGACCCAAAT GTTACTGGAG ATCCATACAA GACGCTCTTT 
GTTGCAAGAC TTAACTATGA GACAACAGAA AGCAGAGTTA AACGTGAATT TGAGGCTTTT 
GGTCCAATCA AGCGGGTTCG CTTGGTTATG GACAAGACAA ACAATAAACC CAGGGGCTAT 
GCTTTCATTG AGTATGTGCA TACACGGGAT ATGAAAGCTG CATATAAACA AGCTGATGGA 
AAGAAGATCG ATAATAGAAG AGTGCTGGTT GATGTTGAAC GTGGGAGAAC AGTCCCCAAT 
TGGCGTCCCC GCAGACTTGG CGGTGGACTT GGAACGACAA GAGTTGGAAA TGAAGATGTC 
AATAGAGAGG TTGTTCAGCC TGGAAGGGCA GCATCTCGCT CTGAAGAGCC AAGAGCACGA 
GATGACAGGG ACAGGGATCG GGAGAAGTCC CGCGAAAGGG TGCGGGATAG GGACAGAGAG 
AAATCTCGTG AGCGTTCTCA TGATAGGCCA AGAGAACGTG AAAGAGATGA CAAACATCAC 
AGGGAACGCG AGAGAACTAG GGAAAGAGAA AAAGATCGCG GACGAGACCG TGATCGAGAC 
CGTGAACGTG ATAGAACACG TGACCGCGAG AGAGGCAAAG ACAGAGACCG GGATCGTGAC 
CGTGAGCGAG ATCGCCACCG TGAGAGGGAT AGTGAAAGAG GTAAGGATGA AGGTGAGGTG 
GACCAGGGTC GTGGTCGTTC TCGTGATAGA GAATATGATC ATGAGCATGT TGAATCAAAA 
CATGAGCGGG GAAGGCACGG TGACAAAGAA AGGAACTATA ATCATGCTGA ACCTGAAGAT 
GATCATGCAC ATTATGAATA TTATGATCAT CACCAAGGTC GAGGAGACTA CGAGAATCCA 
GATGCACATG GTGGTGATGA TCGCTATAAA GATGCCAGTC ATGGTCATGA TCGTTATGAT 
CAAATGGAAG AGGATAATTA TGCATATGAC CATGGGGCAT CTGAGGCAAA AGAAAGGGAC 
CAAGATTACA AGCGTTCAGA CAGGTCACAT TCTCGTGAAT ATGACTACTG A