LOC107847562 cDNA ORF clone, Capsicum annuum

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107847562
Entrez Gene ID	107847562
Full Name	uncharacterized LOC107847562
Gene Type	protein-coding
Organism	Capsicum annuum

mRNA and Protein(s)

mRNA	Protein	Name
XM_016691896.1	XP_016547382.1	uncharacterized protein LOC107847562

Pathways from BioSystems
Gene Ontology

The following LOC107847562 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107847562 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa117249	XM_016691896.1 Latest version!	Capsicum annuum uncharacterized LOC107847562 (LOC107847562), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107847562 ( XM_016691896.1 ) cDNA ORF clone, Capsicum annuum -> XP_016547382.1 Capsicum annuum uncharacterized LOC107847562 (LOC107847562), mRNA.

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CloneID	OCa117249
Clone ID Related Accession (Same CDS sequence)	XM_016691896.1
Accession Version	XM_016691896.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1905bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-04
Organism	Capsicum annuum
Product	uncharacterized protein LOC107847562
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029987.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capsicum annuum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATCTTGA AAGCTTCTAT ATTCATCATT TTCATCACTC TTTTTGTTCA CTGGGAAACC 
TCAGAAGCTG AAGCTCAGGG TGATATTGGA CGAGCCAATT TGCCACCAAG AGGTTGGAAC 
TCTTATGACT CGTTTTGTTG GACCATCTCC GAGGAAGAGT TTCTTAAGAA TGCAGAACTT 
GTAGCACAAC GATTAAAACC TTATGGTTAT CAGTATGTTG TGGTGGACTT TCTTTGGTAT 
AGGAAGAAAA TAATGGGTGC TTATACTGAT TCTTATGGTT ATGATGTCTT TGATGAGTGG 
GGAAGGATGC TTCCTGACCC TGGAAGATGG CCTTCCTCTC AAGGTGGAAA AGGATTTTCT 
GAAGTGGCCC AAAAGGTTCA TAGCATGGGC CTGAAATTTG GGATTCATGT AATGAGAGGT 
TTAAGTGTGC AAGCATTCAA TGCTAACACC CTCATATTGG ATACCACTAC GGGCAAAGCT 
TATGAGGAGG CTGATCGGCA ATGGCGTGCA CAAGATATAG GAATTAAGGA GAGGACTTGC 
TCATGGATGA AAAATGGTTT CATGAGTGTG AATACCAAGT TGGGAGCTGG AAGAGCATTT 
CTTAGGTCAC TTTATCAAAA TTATGCTGAC TGGGGTGTTG ATTTTGTGAA ACATGACTGT 
GTATTCGGTG ATGACTTGGA TTTACATGAA ATTAAAGTTG TTTCAGAGGT ATTAAATGAG 
CTTAACCGAC CTATCATATA TTCCTTGTCC CCTGGAACTA ATGCAAAACC AATCATTGCG 
AAGGAAGTAA GTGGTTTGGT CAATATGTAT CGGATAACCG GGGATGACTG GGATACTTGG 
AATGATGTGT CTGTCCACTT CAACGTTGCG AGGGACTTCA CTGCTGCTAA CTTAGTAGGA 
ATCAAGGGCC TGAAGGGGAA ATCGTGGCCC GACTTAGATA TGCTACCACT TGGATGGCTA 
TCGGATGCAG GTTCAAATAA AGGTCCACAC AGATATTCTA GGCTTAATCT GGATGAGCAA 
CGTACTCAGG TGACTCTATG GTCCATGGTC AGGTCCCCTC TCATCTTTGG TGGAGATATG 
AGACAGCTTG ACGATGCTAC ATTTAGTCTT CTTACAAATC CTACTCTTTT GGAGATTAAC 
TGGTTTAGCT CAAACAACAT GGAGTTTCAT TATGTGACAG GTTCTTTGAG TTCATCTGGG 
AAACATGGCT TGACTCACCA TAACAAGGAT AAAGAAAAAA TAAATGTGTT GGAGATGAGA 
GTTTTGACTC TAAGGAGCTG CAAAGATGTA AATGCAAATG GTTGGTCTAC CAAAGTTCTT 
GACAATGATC TAGAGCAAGT ATGCTGGGAA GAGAACTCAA ATAAACGCAA GGCACGTTTT 
TGTCTATACA AGAGAGAAGC ACTTTCAGCA TCAGAAGGGG AGATGGTATA TAAGCACCAA 
AATCACGGGA AACCTCACTT ATTGGTAACA GAGAGAACAG AATTTTGTTT TGGTGCATCT 
TCAAATAAAA AGCTTACAGC TAAAGAGTTG AGCAGAGGTT CATTTTCACG GTGCAGATCA 
CATGCCAATC AGATGTGGGA GTTGAACTTG AACGGAACCC TTACAAATAG TTATTCTGGT 
CTTTGCGCTA CCATGGATCT TGTCAAAGCT TCTTCTGGTG GAGTTAGGTC CTGGCTTGCA 
ACTGGAAGGA GAGGAGAAAT CTACTTGGCG TTTTTCAATT TAAACAATCA GGCGACACAA 
ATGTCAGCAA AAATATCAGA GATAGCCAAT GCAATTCATG CTACAAGTTC AATCTGCAGT 
GGCAGAGAAG TATGGAGTGG CACAAATCTT GGAGCCATAA AGGATTCAAT ACGCACGTCA 
GTAAAAGCTC ACGGCTGTGC ACTGTTTGTC TTGAACTGCA GATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016547382.1
CDS	227..2131
Translation	MILKASIFIIFITLFVHWETSEAEAQGDIGRANLPPRGWNSYDSFCWTISEEEFLKNAELVAQRLKPYGYQYVVVDFLWYRKKIMGAYTDSYGYDVFDEWGRMLPDPGRWPSSQGGKGFSEVAQKVHSMGLKFGIHVMRGLSVQAFNANTLILDTTTGKAYEEADRQWRAQDIGIKERTCSWMKNGFMSVNTKLGAGRAFLRSLYQNYADWGVDFVKHDCVFGDDLDLHEIKVVSEVLNELNRPIIYSLSPGTNAKPIIAKEVSGLVNMYRITGDDWDTWNDVSVHFNVARDFTAANLVGIKGLKGKSWPDLDMLPLGWLSDAGSNKGPHRYSRLNLDEQRTQVTLWSMVRSPLIFGGDMRQLDDATFSLLTNPTLLEINWFSSNNMEFHYVTGSLSSSGKHGLTHHNKDKEKINVLEMRVLTLRSCKDVNANGWSTKVLDNDLEQVCWEENSNKRKARFCLYKREALSASEGEMVYKHQNHGKPHLLVTERTEFCFGASSNKKLTAKELSRGSFSRCRSHANQMWELNLNGTLTNSYSGLCATMDLVKASSGGVRSWLATGRRGEIYLAFFNLNNQATQMSAKISEIANAIHATSSICSGREVWSGTNLGAIKDSIRTSVKAHGCALFVLNCR

Target ORF information:

RefSeq Version	XM_016691896.1
Organism	Capsicum annuum
Definition	Capsicum annuum uncharacterized LOC107847562 (LOC107847562), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016691896.1

ORF Insert Sequence:

ATGATCTTGA AAGCTTCTAT ATTCATCATT TTCATCACTC TTTTTGTTCA CTGGGAAACC 
TCAGAAGCTG AAGCTCAGGG TGATATTGGA CGAGCCAATT TGCCACCAAG AGGTTGGAAC 
TCTTATGACT CGTTTTGTTG GACCATCTCC GAGGAAGAGT TTCTTAAGAA TGCAGAACTT 
GTAGCACAAC GATTAAAACC TTATGGTTAT CAGTATGTTG TGGTGGACTT TCTTTGGTAT 
AGGAAGAAAA TAATGGGTGC TTATACTGAT TCTTATGGTT ATGATGTCTT TGATGAGTGG 
GGAAGGATGC TTCCTGACCC TGGAAGATGG CCTTCCTCTC AAGGTGGAAA AGGATTTTCT 
GAAGTGGCCC AAAAGGTTCA TAGCATGGGC CTGAAATTTG GGATTCATGT AATGAGAGGT 
TTAAGTGTGC AAGCATTCAA TGCTAACACC CTCATATTGG ATACCACTAC GGGCAAAGCT 
TATGAGGAGG CTGATCGGCA ATGGCGTGCA CAAGATATAG GAATTAAGGA GAGGACTTGC 
TCATGGATGA AAAATGGTTT CATGAGTGTG AATACCAAGT TGGGAGCTGG AAGAGCATTT 
CTTAGGTCAC TTTATCAAAA TTATGCTGAC TGGGGTGTTG ATTTTGTGAA ACATGACTGT 
GTATTCGGTG ATGACTTGGA TTTACATGAA ATTAAAGTTG TTTCAGAGGT ATTAAATGAG 
CTTAACCGAC CTATCATATA TTCCTTGTCC CCTGGAACTA ATGCAAAACC AATCATTGCG 
AAGGAAGTAA GTGGTTTGGT CAATATGTAT CGGATAACCG GGGATGACTG GGATACTTGG 
AATGATGTGT CTGTCCACTT CAACGTTGCG AGGGACTTCA CTGCTGCTAA CTTAGTAGGA 
ATCAAGGGCC TGAAGGGGAA ATCGTGGCCC GACTTAGATA TGCTACCACT TGGATGGCTA 
TCGGATGCAG GTTCAAATAA AGGTCCACAC AGATATTCTA GGCTTAATCT GGATGAGCAA 
CGTACTCAGG TGACTCTATG GTCCATGGTC AGGTCCCCTC TCATCTTTGG TGGAGATATG 
AGACAGCTTG ACGATGCTAC ATTTAGTCTT CTTACAAATC CTACTCTTTT GGAGATTAAC 
TGGTTTAGCT CAAACAACAT GGAGTTTCAT TATGTGACAG GTTCTTTGAG TTCATCTGGG 
AAACATGGCT TGACTCACCA TAACAAGGAT AAAGAAAAAA TAAATGTGTT GGAGATGAGA 
GTTTTGACTC TAAGGAGCTG CAAAGATGTA AATGCAAATG GTTGGTCTAC CAAAGTTCTT 
GACAATGATC TAGAGCAAGT ATGCTGGGAA GAGAACTCAA ATAAACGCAA GGCACGTTTT 
TGTCTATACA AGAGAGAAGC ACTTTCAGCA TCAGAAGGGG AGATGGTATA TAAGCACCAA 
AATCACGGGA AACCTCACTT ATTGGTAACA GAGAGAACAG AATTTTGTTT TGGTGCATCT 
TCAAATAAAA AGCTTACAGC TAAAGAGTTG AGCAGAGGTT CATTTTCACG GTGCAGATCA 
CATGCCAATC AGATGTGGGA GTTGAACTTG AACGGAACCC TTACAAATAG TTATTCTGGT 
CTTTGCGCTA CCATGGATCT TGTCAAAGCT TCTTCTGGTG GAGTTAGGTC CTGGCTTGCA 
ACTGGAAGGA GAGGAGAAAT CTACTTGGCG TTTTTCAATT TAAACAATCA GGCGACACAA 
ATGTCAGCAA AAATATCAGA GATAGCCAAT GCAATTCATG CTACAAGTTC AATCTGCAGT 
GGCAGAGAAG TATGGAGTGG CACAAATCTT GGAGCCATAA AGGATTCAAT ACGCACGTCA 
GTAAAAGCTC ACGGCTGTGC ACTGTTTGTC TTGAACTGCA GATAA