CAALFM_CR01700CA cDNA ORF clone, Candida albicans SC5314

Gene
Clones
gRNAs

Summary

Gene Symbol	CAALFM_CR01700CA
Entrez Gene ID	3640129
Full Name	U6 snRNP complex subunit
Synonyms	CaO19.2563
Gene Type	protein-coding
Organism	Candida albicans SC5314

mRNA and Protein(s)

mRNA	Protein	Name
XM_713137.2	XP_718230.2	U6 snRNP complex subunit

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure.
Muzzey D, Schwartz K, Weissman JS, Sherlock G
Genome biology14(9)R97(2013)

Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes.
van het Hoog M, Rast TJ, Martchenko M, Grindle S, Dignard D, Hogues H, Cuomo C, Berriman M, Scherer S, Magee BB, Whiteway M, Chibana H, Nantel A, Magee PT
Genome biology8(4)R52(2007)

The diploid genome sequence of Candida albicans.
Jones T, Federspiel NA, Chibana H, Dungan J, Kalman S, Magee BB, Newport G, Thorstenson YR, Agabian N, Magee PT, Davis RW, Scherer S
Proceedings of the National Academy of Sciences of the United States of America101(19)7329-34(2004 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CAALFM_CR01700CA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CAALFM_CR01700CA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCg12292	XM_713137.2 Latest version!	Candida albicans SC5314 U6 snRNP complex subunit (CAALFM_CR01700CA), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CAALFM_CR01700CA ( XM_713137.2 ) cDNA ORF clone, Candida albicans SC5314 -> XP_718230.2 Candida albicans SC5314 U6 snRNP complex subunit (CAALFM_CR01700CA), partial mRNA.

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CloneID	OCg12292
Clone ID Related Accession (Same CDS sequence)	XM_713137.2
Accession Version	XM_713137.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2748bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-04-03
Organism	Candida albicans SC5314
Product	U6 snRNP complex subunit
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032096). On Dec 8, 2016 this sequence version replaced XM_713137.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends.

ATGGAATCAA GTGAACTGAT ACAGGAAAAC CAGTTGAATC GATATATTCT CGAAGATTAT 
GATCGAATGC TTAAATCTGT CACTGAGATT GATAACCCGC AAAGAAAATG TCATATTTTG 
AATGAAGTAT ACAAAATGAA ACTAAAATAT TTTCGCTTAA AGCAATCAGA ATTGAATGAT 
TGGCTAGAGG CAATTCATCT AATGGAAGAT ACTCATGAAC GAGTGTTTTC AGAGTTTGAG 
TTTTATTCAT TGATTTCCCC AGATTACACC AATGCTGATG TGACAAGCAG TTTTCTAAAA 
CATTTTCAAG AATTCAAAGA CTTGGATGAA TCAGGTTTCG AAGCAAAACT CCTAGATGCT 
ATTAACATTT CTTGTCATGA TTTTTCTAGA GGTAATCTAA TATGGAAGCA ATTGATCGAC 
GCTGCTCAAG ATGAATACTT GAAAGTAAAT TCTGATACCA ATTTAATGCA TTTACATCAG 
TATTACCTTG ACAGATTGGC CATCCCTCAT GCCCAGCTTG AAGAATCCTT TAATGAATAC 
TCTTCATTTA TAAGCAAATA CTACGGTGAT GATTACGACA AGTACATGAA ATATATGAAG 
TCCGCTAACA AGATTTACTC ATCTACAAAA ATGAAACAGA TTTACTACGA ACAGTTTGAG 
ATTTCTATCA AACAATCACC TGATAACCCT CAACTATGGA TAGATTATAT GGAAAGCGTT 
TATAGCCACC AAAAGAAAAA AGATTTGAAT CCTGTTCTTG CCATTTTTGA AAGAGCAATA 
CTGAAAAATG AATCTTGGTC ACAGAATTGG ATAAAAATTT GGTTAGCTCT TATTTACATT 
ATTTATGGTT GCAGTAGTGA TCAGCGACCT GAATGGTTAC AGTTTGTTTT CCAAAAGTTT 
TTAAGGACTT TTCCGAATTC TAACCATGTC TATGCGGAGT CTATTCGTTA TTGTTTGACC 
ATGAATGATA ATGAGATGGC TACTGAAGAG TTTCAAAGTA TAGAATCCAG GTTAGAATCT 
ACCAAAAAAT TATTGCAGTG GGATCATCAA CAATGGAAAT CAGTGCATTT GGCTTTTATT 
CAATTTAATT ATCAAATATC GAAAAGATAC AGTATGGACA ACAACAAACT GATTGTGGAG 
CTGAGCAGTA ACTCCATATT TATGCGTGCA TTATCGGTAA TAGAACTTGG CGATCCTTCT 
CATTCCGTTG AATTTCTAGC AGTTGATATG CTAACACACA TGGGAGCAAC TGACATGGCC 
AAAGACCTAA TAGACTTGAT GTTGGAGAAA TTTAATAACG AGGCAGAGGT TTTGCTTTTT 
GGTTTGAGGT ATTTTGTGAG TTATAAAACA GACTTTGGTC AAATTCGTTC ATACTTTAAA 
AATGCAATCC ATAAACTAGA CCTGTTTGAC CTTCCTGAGA AATTATGTGA CAAATGGTTG 
GAGTTTGAGC AACTATACGG AGACATAAAC AGTTATATGG AATCAGTTGC AAAATGTGAA 
ATTGCTTTAA AAACTTTGAG CAAGAAAAGA ACTCGAGATA TTACAGTGGA TGAAAACAAT 
CAACCCTCCA AAAAACACAA AAGAGAACCG ACAAAGGATA TTGACACTGA AACTAAATCG 
AGAGAAACAT GCACTGTCAA AGTTAAAAAT ATTGCAGCTG ACACTGACGA ACATTCTATC 
AGAGATTTTT TCAAAGACTG TGGAGAAATT GGTGATATCT CTTTCGTGGA AGCTGAAGGA 
ATTCGCTATG CAATATTTGA CTTTGAAAAT GAGCAACAGG TTTTTTCAGC ATTGACGAAG 
AATTATAAGT CTTTGGATGG AAATAAACTT GAAGTATACA GACTACAGAA TGCCTTGTTA 
TTTGTTAATA ATTACCCTTC TACTTTCAGT CAAGCCACTG TAAAAGAAAT GTTTGAAAAA 
ATAGGACCGG TAGCTAAAAT CAGATTTCCT AATCAAACCC TGAAAAAAAT AAAGAGATTT 
TGTTATGTTC AAATGATTTC TAATGAAGAT GCTCAAAAGA TTATTGATCA GTACCATGGC 
CAGAAATACG ACGATCCAAA TCTAGGAGGT GAATTCTCAT GGGAAATTAA GTTTTCCAAC 
CCTGAAGAAA AACACGAAAG GTCGTCACCA ATAAGTGCAC GCAAAGTGAA AGTTACTAGT 
ATTTCCTTTA ACGTGCTGAA AGAAGCTTTT GAAAAGAAAT TTACCCTGTG TGGAGAAATT 
GAACAGGTTG TGTTTCCAAA AGCGGTATAT GAAGAGGATG GGAAATTGAA AAGCAATGGT 
GGTTTGGCTA TTGTTACTTA CAAGACTACA GAAGGTGTGG AAAATGCGTT AAAGTTGAAT 
GATTCGAAAT GGATGGGTCG AAAATTGTTT GTTTCCAAAA AACACCAGCA TGTTCATTAT 
ACGGCAGAAG ATTTTGATGG TGTGAAAACA ATTGGGCTTT GTGGATTGGA CCCTTCATTA 
AATTTCCAGC AAGTGAAGAC AGTTTTTGAG GAAAGGTTTG GGAAGGTTGC TAAAGTGTTG 
TTGTTCCCAG AAGACAAACA AGCTTTGGTA GAGTTTGTAA AACCTGGAGA TGCTGGCAAG 
ACGAGTATGA GTAATAATTT TGTGAAACTA GGCGAAAGCG AAGCAAAAAT AGTGACCAAG 
GAAGAGATAA CAATGGGTAA AAGTGCTATT TCAAATACAA CTACAACTTC ATCGGCACCT 
CTTACAATGA TTCCCACCAC AGTTAGACGA AAAAAATCTA AAAAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_718230.2
CDS	1..2748
Translation	MESSELIQENQLNRYILEDYDRMLKSVTEIDNPQRKCHILNEVYKMKLKYFRLKQSELNDWLEAIHLMEDTHERVFSEFEFYSLISPDYTNADVTSSFLKHFQEFKDLDESGFEAKLLDAINISCHDFSRGNLIWKQLIDAAQDEYLKVNSDTNLMHLHQYYLDRLAIPHAQLEESFNEYSSFISKYYGDDYDKYMKYMKSANKIYSSTKMKQIYYEQFEISIKQSPDNPQLWIDYMESVYSHQKKKDLNPVLAIFERAILKNESWSQNWIKIWLALIYIIYGCSSDQRPEWLQFVFQKFLRTFPNSNHVYAESIRYCLTMNDNEMATEEFQSIESRLESTKKLLQWDHQQWKSVHLAFIQFNYQISKRYSMDNNKLIVELSSNSIFMRALSVIELGDPSHSVEFLAVDMLTHMGATDMAKDLIDLMLEKFNNEAEVLLFGLRYFVSYKTDFGQIRSYFKNAIHKLDLFDLPEKLCDKWLEFEQLYGDINSYMESVAKCEIALKTLSKKRTRDITVDENNQPSKKHKREPTKDIDTETKSRETCTVKVKNIAADTDEHSIRDFFKDCGEIGDISFVEAEGIRYAIFDFENEQQVFSALTKNYKSLDGNKLEVYRLQNALLFVNNYPSTFSQATVKEMFEKIGPVAKIRFPNQTLKKIKRFCYVQMISNEDAQKIIDQYHGQKYDDPNLGGEFSWEIKFSNPEEKHERSSPISARKVKVTSISFNVLKEAFEKKFTLCGEIEQVVFPKAVYEEDGKLKSNGGLAIVTYKTTEGVENALKLNDSKWMGRKLFVSKKHQHVHYTAEDFDGVKTIGLCGLDPSLNFQQVKTVFEERFGKVAKVLLFPEDKQALVEFVKPGDAGKTSMSNNFVKLGESEAKIVTKEEITMGKSAISNTTTTSSAPLTMIPTTVRRKKSKK

Target ORF information:

RefSeq Version	XM_713137.2
Organism	Candida albicans SC5314
Definition	Candida albicans SC5314 U6 snRNP complex subunit (CAALFM_CR01700CA), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_713137.2

ORF Insert Sequence:

ATGGAATCAA GTGAACTGAT ACAGGAAAAC CAGTTGAATC GATATATTCT CGAAGATTAT 
GATCGAATGC TTAAATCTGT CACTGAGATT GATAACCCGC AAAGAAAATG TCATATTTTG 
AATGAAGTAT ACAAAATGAA ACTAAAATAT TTTCGCTTAA AGCAATCAGA ATTGAATGAT 
TGGCTAGAGG CAATTCATCT AATGGAAGAT ACTCATGAAC GAGTGTTTTC AGAGTTTGAG 
TTTTATTCAT TGATTTCCCC AGATTACACC AATGCTGATG TGACAAGCAG TTTTCTAAAA 
CATTTTCAAG AATTCAAAGA CTTGGATGAA TCAGGTTTCG AAGCAAAACT CCTAGATGCT 
ATTAACATTT CTTGTCATGA TTTTTCTAGA GGTAATCTAA TATGGAAGCA ATTGATCGAC 
GCTGCTCAAG ATGAATACTT GAAAGTAAAT TCTGATACCA ATTTAATGCA TTTACATCAG 
TATTACCTTG ACAGATTGGC CATCCCTCAT GCCCAGCTTG AAGAATCCTT TAATGAATAC 
TCTTCATTTA TAAGCAAATA CTACGGTGAT GATTACGACA AGTACATGAA ATATATGAAG 
TCCGCTAACA AGATTTACTC ATCTACAAAA ATGAAACAGA TTTACTACGA ACAGTTTGAG 
ATTTCTATCA AACAATCACC TGATAACCCT CAACTATGGA TAGATTATAT GGAAAGCGTT 
TATAGCCACC AAAAGAAAAA AGATTTGAAT CCTGTTCTTG CCATTTTTGA AAGAGCAATA 
CTGAAAAATG AATCTTGGTC ACAGAATTGG ATAAAAATTT GGTTAGCTCT TATTTACATT 
ATTTATGGTT GCAGTAGTGA TCAGCGACCT GAATGGTTAC AGTTTGTTTT CCAAAAGTTT 
TTAAGGACTT TTCCGAATTC TAACCATGTC TATGCGGAGT CTATTCGTTA TTGTTTGACC 
ATGAATGATA ATGAGATGGC TACTGAAGAG TTTCAAAGTA TAGAATCCAG GTTAGAATCT 
ACCAAAAAAT TATTGCAGTG GGATCATCAA CAATGGAAAT CAGTGCATTT GGCTTTTATT 
CAATTTAATT ATCAAATATC GAAAAGATAC AGTATGGACA ACAACAAACT GATTGTGGAG 
CTGAGCAGTA ACTCCATATT TATGCGTGCA TTATCGGTAA TAGAACTTGG CGATCCTTCT 
CATTCCGTTG AATTTCTAGC AGTTGATATG CTAACACACA TGGGAGCAAC TGACATGGCC 
AAAGACCTAA TAGACTTGAT GTTGGAGAAA TTTAATAACG AGGCAGAGGT TTTGCTTTTT 
GGTTTGAGGT ATTTTGTGAG TTATAAAACA GACTTTGGTC AAATTCGTTC ATACTTTAAA 
AATGCAATCC ATAAACTAGA CCTGTTTGAC CTTCCTGAGA AATTATGTGA CAAATGGTTG 
GAGTTTGAGC AACTATACGG AGACATAAAC AGTTATATGG AATCAGTTGC AAAATGTGAA 
ATTGCTTTAA AAACTTTGAG CAAGAAAAGA ACTCGAGATA TTACAGTGGA TGAAAACAAT 
CAACCCTCCA AAAAACACAA AAGAGAACCG ACAAAGGATA TTGACACTGA AACTAAATCG 
AGAGAAACAT GCACTGTCAA AGTTAAAAAT ATTGCAGCTG ACACTGACGA ACATTCTATC 
AGAGATTTTT TCAAAGACTG TGGAGAAATT GGTGATATCT CTTTCGTGGA AGCTGAAGGA 
ATTCGCTATG CAATATTTGA CTTTGAAAAT GAGCAACAGG TTTTTTCAGC ATTGACGAAG 
AATTATAAGT CTTTGGATGG AAATAAACTT GAAGTATACA GACTACAGAA TGCCTTGTTA 
TTTGTTAATA ATTACCCTTC TACTTTCAGT CAAGCCACTG TAAAAGAAAT GTTTGAAAAA 
ATAGGACCGG TAGCTAAAAT CAGATTTCCT AATCAAACCC TGAAAAAAAT AAAGAGATTT 
TGTTATGTTC AAATGATTTC TAATGAAGAT GCTCAAAAGA TTATTGATCA GTACCATGGC 
CAGAAATACG ACGATCCAAA TCTAGGAGGT GAATTCTCAT GGGAAATTAA GTTTTCCAAC 
CCTGAAGAAA AACACGAAAG GTCGTCACCA ATAAGTGCAC GCAAAGTGAA AGTTACTAGT 
ATTTCCTTTA ACGTGCTGAA AGAAGCTTTT GAAAAGAAAT TTACCCTGTG TGGAGAAATT 
GAACAGGTTG TGTTTCCAAA AGCGGTATAT GAAGAGGATG GGAAATTGAA AAGCAATGGT 
GGTTTGGCTA TTGTTACTTA CAAGACTACA GAAGGTGTGG AAAATGCGTT AAAGTTGAAT 
GATTCGAAAT GGATGGGTCG AAAATTGTTT GTTTCCAAAA AACACCAGCA TGTTCATTAT 
ACGGCAGAAG ATTTTGATGG TGTGAAAACA ATTGGGCTTT GTGGATTGGA CCCTTCATTA 
AATTTCCAGC AAGTGAAGAC AGTTTTTGAG GAAAGGTTTG GGAAGGTTGC TAAAGTGTTG 
TTGTTCCCAG AAGACAAACA AGCTTTGGTA GAGTTTGTAA AACCTGGAGA TGCTGGCAAG 
ACGAGTATGA GTAATAATTT TGTGAAACTA GGCGAAAGCG AAGCAAAAAT AGTGACCAAG 
GAAGAGATAA CAATGGGTAA AAGTGCTATT TCAAATACAA CTACAACTTC ATCGGCACCT 
CTTACAATGA TTCCCACCAC AGTTAGACGA AAAAAATCTA AAAAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure.
Genome biology14(9)R97(2013)
Muzzey D,Schwartz K,Weissman JS,Sherlock G

Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes.
Genome biology8(4)R52(2007)
van het Hoog M,Rast TJ,Martchenko M,Grindle S,Dignard D,Hogues H,Cuomo C,Berriman M,Scherer S,Magee BB,Whiteway M,Chibana H,Nantel A,Magee PT

The diploid genome sequence of Candida albicans.
Proceedings of the National Academy of Sciences of the United States of America101(19)7329-34(2004 May)
Jones T,Federspiel NA,Chibana H,Dungan J,Kalman S,Magee BB,Newport G,Thorstenson YR,Agabian N,Magee PT,Davis RW,Scherer S

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CAALFM_CR01700CA cDNA ORF clone, Candida albicans SC5314

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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