il3ra cDNA ORF clone, Callorhinchus milii(elephant shark)

Gene
Clones
gRNAs

Summary

Gene Symbol	il3ra
Entrez Gene ID	103177098
Full Name	interleukin 3 receptor subunit alpha
Gene Type	protein-coding
Organism	Callorhinchus milii(elephant shark)

mRNA and Protein(s)

mRNA	Protein	Name
XM_007891065.1	XP_007889256.1	interleukin-3 receptor subunit alpha isoform X1
NM_001292601.1	NP_001279530.1	interleukin-3 receptor subunit alpha precursor

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Elephant shark genome provides unique insights into gnathostome evolution.
Venkatesh B, Lee AP, Ravi V, Maurya AK, Lian MM, Swann JB, Ohta Y, Flajnik MF, Sutoh Y, Kasahara M, Hoon S, Gangu V, Roy SW, Irimia M, Korzh V, Kondrychyn I, Lim ZW, Tay BH, Tohari S, Kong KW, Ho S, Lorente-Galdos B, Quilez J, Marques-Bonet T, Raney BJ, Ingham PW, Tay A, Hillier LW, Minx P, Boehm T, Wilson RK, Brenner S, Warren WC
Nature505(7482)174-9(2014 Jan)

Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii).
Tan YY, Kodzius R, Tay BH, Tay A, Brenner S, Venkatesh B
PloS one7(10)e47174(2012)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following il3ra gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the il3ra cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa121476	NM_001292601.1 Latest version!	Callorhinchus milii interleukin 3 receptor subunit alpha (il3ra), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OCa374472	XM_007891065.1 Latest version!	Callorhinchus milii interleukin 3 receptor, alpha (low affinity) (il3ra), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

il3ra ( NM_001292601.1 ) cDNA ORF clone, Callorhinchus milii(elephant shark) -> NP_001279530.1 Callorhinchus milii interleukin 3 receptor subunit alpha (il3ra), mRNA.

Price & Availability↑

CloneID	OCa121476
Clone ID Related Accession (Same CDS sequence)	NM_001292601.1
Accession Version	NM_001292601.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1203bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-04
Organism	Callorhinchus milii(elephant shark)
Product	interleukin-3 receptor subunit alpha precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JX052532.1. On May 23, 2014 this sequence version replaced XM_007891066.1. ##Evidence-Data-START## Transcript exon combination :: JX052532.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00188955, SAMN02699930 [ECO:0000348] ##Evidence-Data-END##

ATGCAGCTCT TGCAAGTTTC CTTGCTAATG GCCGCCCTTT GGTTGCTGCC AGTGAATGGA 
GTGCCCATCA TGTCTCTCAA GGAAAGGGTG GAGATGAACC AGCCTACAGA CCTGAGGCTC 
ACCCCCCGAC GGCTTGGGGA GTTCATGTTC ACTTGGACTG GAAACCTTTC TGGGCTGAAC 
AGAACCGATT GCAAGTTATA CTACAAGCTC TGCTACAGAC ACCTGGACTC AAAGGAGGAA 
TCGAGTGTCC TGGTTAAAAC CCATCACCAT CTGGTGCATT TGGAACTGTA TAGAGGGGCA 
TATGCCAGGG TGAAACTACT GGACAGGAAC CAGAGGGACG AAATATCAAG CAACTGGACT 
GAGATGACTT TTGTTCCATT GCGTAAAGAG TTTGCCTCGA TTGAAAATCT ATCATGTGTC 
TTTTATAACA TTGAATATAT GAACTGCACG TGGGACATTA GTGAGATAGC GCCACAAGAC 
TCACAGTTTG TACTGTTTTA CAGAGAAGAT GAGCAGAATG ACACGCACAC TTGCGAGAAG 
TATCACACGC AGCTGCGGAG GAACATTGGC TGTTACTCAC AGAGATACAA CGGCAGCTTG 
TTCAGTGAGG GCTTCATTTG CGTCGCTGAG ACCAGCAACC CGGAAGCTCG TCCCCATTGT 
AGAATGATCA CTCCGAGTTC CTTCTACATT CTCAACCCTC CGATGAACTT TAAATTAAAA 
TCTCCCAGTC ATATGGCTAC ATGGGAGCTG GGAGAGGATT ATTCATATCA GGTTGAAAAT 
GTGAGCTCAA CACGATTCGC CATAAATACA AATCCAGTTG AAGGATTTTC AGTCCAAGTA 
AGGGCAACAA TGAATTACAA CTGTTACGAA AGTTCTCTCT GGAGCAAGTG GAGTCGGACA 
ATCACAAGAA AGCCCGAAGC AATGGAATGC TCCCATTCAG CAGCTGTGAT GTTGTCTGTG 
ATTTGCTTTG TGTTCATGAC GCTGCCCCTT GCTTTCATCT TCAGGAGATA CAGATTATGG 
GAAAAACTGT ACCAACCAAT CCCCGACCCG AAGCAGATGT TCAAGGGCCT GTACGAAAAC 
TACAATGGCG ACTTTCAGAA CTGGATTAAA AGTCTTCCGA TGACAGAGAA AAATGAAGAA 
TGCATTCCAG CCACAGTCAA AGAAGAAGAG AGTTTTGCCC CAGAAAAGTC TGGAATGACA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001279530.1
CDS	175..1377
Translation	MQLLQVSLLMAALWLLPVNGVPIMSLKERVEMNQPTDLRLTPRRLGEFMFTWTGNLSGLNRTDCKLYYKLCYRHLDSKEESSVLVKTHHHLVHLELYRGAYARVKLLDRNQRDEISSNWTEMTFVPLRKEFASIENLSCVFYNIEYMNCTWDISEIAPQDSQFVLFYREDEQNDTHTCEKYHTQLRRNIGCYSQRYNGSLFSEGFICVAETSNPEARPHCRMITPSSFYILNPPMNFKLKSPSHMATWELGEDYSYQVENVSSTRFAINTNPVEGFSVQVRATMNYNCYESSLWSKWSRTITRKPEAMECSHSAAVMLSVICFVFMTLPLAFIFRRYRLWEKLYQPIPDPKQMFKGLYENYNGDFQNWIKSLPMTEKNEECIPATVKEEESFAPEKSGMT

Target ORF information:

RefSeq Version	NM_001292601.1
Organism	Callorhinchus milii(elephant shark)
Definition	Callorhinchus milii interleukin 3 receptor subunit alpha (il3ra), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001292601.1

ORF Insert Sequence:

ATGCAGCTCT TGCAAGTTTC CTTGCTAATG GCCGCCCTTT GGTTGCTGCC AGTGAATGGA 
GTGCCCATCA TGTCTCTCAA GGAAAGGGTG GAGATGAACC AGCCTACAGA CCTGAGGCTC 
ACCCCCCGAC GGCTTGGGGA GTTCATGTTC ACTTGGACTG GAAACCTTTC TGGGCTGAAC 
AGAACCGATT GCAAGTTATA CTACAAGCTC TGCTACAGAC ACCTGGACTC AAAGGAGGAA 
TCGAGTGTCC TGGTTAAAAC CCATCACCAT CTGGTGCATT TGGAACTGTA TAGAGGGGCA 
TATGCCAGGG TGAAACTACT GGACAGGAAC CAGAGGGACG AAATATCAAG CAACTGGACT 
GAGATGACTT TTGTTCCATT GCGTAAAGAG TTTGCCTCGA TTGAAAATCT ATCATGTGTC 
TTTTATAACA TTGAATATAT GAACTGCACG TGGGACATTA GTGAGATAGC GCCACAAGAC 
TCACAGTTTG TACTGTTTTA CAGAGAAGAT GAGCAGAATG ACACGCACAC TTGCGAGAAG 
TATCACACGC AGCTGCGGAG GAACATTGGC TGTTACTCAC AGAGATACAA CGGCAGCTTG 
TTCAGTGAGG GCTTCATTTG CGTCGCTGAG ACCAGCAACC CGGAAGCTCG TCCCCATTGT 
AGAATGATCA CTCCGAGTTC CTTCTACATT CTCAACCCTC CGATGAACTT TAAATTAAAA 
TCTCCCAGTC ATATGGCTAC ATGGGAGCTG GGAGAGGATT ATTCATATCA GGTTGAAAAT 
GTGAGCTCAA CACGATTCGC CATAAATACA AATCCAGTTG AAGGATTTTC AGTCCAAGTA 
AGGGCAACAA TGAATTACAA CTGTTACGAA AGTTCTCTCT GGAGCAAGTG GAGTCGGACA 
ATCACAAGAA AGCCCGAAGC AATGGAATGC TCCCATTCAG CAGCTGTGAT GTTGTCTGTG 
ATTTGCTTTG TGTTCATGAC GCTGCCCCTT GCTTTCATCT TCAGGAGATA CAGATTATGG 
GAAAAACTGT ACCAACCAAT CCCCGACCCG AAGCAGATGT TCAAGGGCCT GTACGAAAAC 
TACAATGGCG ACTTTCAGAA CTGGATTAAA AGTCTTCCGA TGACAGAGAA AAATGAAGAA 
TGCATTCCAG CCACAGTCAA AGAAGAAGAG AGTTTTGCCC CAGAAAAGTC TGGAATGACA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

il3ra ( XM_007891065.1 ) cDNA ORF clone, Callorhinchus milii(elephant shark) -> XP_007889256.1 Callorhinchus milii interleukin 3 receptor, alpha (low affinity) (il3ra), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OCa374472
Clone ID Related Accession (Same CDS sequence)	XM_007891065.1
Accession Version	XM_007891065.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1260bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-05-08
Organism	Callorhinchus milii(elephant shark)
Product	interleukin-3 receptor subunit alpha isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006890071.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callorhinchus milii Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCAGCTCT TGCAAGTTTC CTTGCTAATG GCCGCCCTTT GGTTGCTGCC AGTGAATGGA 
GTGCCCATCA TGTCTCTCAA GGAAAGGGTG GAGATGAACC AGCCTACAGA CCTGAGGCTC 
ACCCCCCAAC GGCTTGGGGA GTTCATGTTC ACTTGGACTG GAAACCTTTC TGGGCTGAAC 
AGAACCGATT GCAAGTTATA CTACAAGCTC TGCTACAGAC ACCTGGACTC AAAGGAGGAA 
TCGAGTGTCC TGGTTAAAAC CCATCACCAT CTGGTGCATT TGGAACTGTA TAGAGGGGCA 
TATGCCAGGG TGAAACTACT GGACAGGAAC CAGAGGGACG AAATATCAAG CAACTGGACT 
GAGATGACTT TTGTTCCATT GCGTAAAGAG TTTGCCTCGA TTGAAAATCT ATCATGTGTC 
TTTTATAACA TTGAATATAT GAACTGCACG TGGGACATTA GTGAGATAGC GCCACAAGAC 
TCACAGTTTG TACTGTTTTA CAGAGAAGAT GAGCAGAATG ACACGCACAC TTGCGAGAAG 
TATCACACGC AGCTGCGGAG GAACATTGGC TGTTACTCAC AGAGATACAA CGGCAGCTTG 
TTCAGTGAGG GCTTCATTTG CGTCGCTGAG ACCAGCAACC CGGAAGCTCG TCCCCATTGT 
AGAATGATCA CTCCGAGTTC CTTCTACATT CTCAACCCTC CGATGAACTT TAAATTAAAA 
TCTCCCAGTC ATATGGCTAC ATGGGAGCTG GGAGAGGATT ATTCATATCA CGTGCCTTGT 
TACACTTTCC AAATAAATAT CATAGACTGG AGAGGCAATA CTTCAAAGGT TGAAAATGTG 
AGCTCAACAC GATTCGCCAT AAATACAAAT CCAGTTGAAG GATTTTCAGT CCAAGTAAGG 
GCAACAATGA ATTACAACTG TTACGAAAGT TCTCTCTGGA GCAAGTGGAG TCGGACAATC 
ACAAGAAAGC CCGAAGCAAT GGAATGCTCC CATTCAGCAG CTGTGATGTT GTCTGTGATT 
TGCTTTGTGT TCATGACGCT GCCCCTTGCT TTCATCTTCA GGAGATACAG ATTATGGGAA 
AAACTGTACC AACCAATCCC CGACCCGAAG CAGATGTTCA AGGGCCTGTA CGAAAACTAC 
AATGGCGACT TTCAGAACTG GATTAAAAGT CTTCCGATGA CAGAGAAAAA TGAAGAATGC 
ATTCCAGCCA CAGTCAAAGA AGAAGAGAGT TTTGCCCCAG AAAAGTCTGG AATGACATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_007889256.1
CDS	208..1467
Translation	MQLLQVSLLMAALWLLPVNGVPIMSLKERVEMNQPTDLRLTPQRLGEFMFTWTGNLSGLNRTDCKLYYKLCYRHLDSKEESSVLVKTHHHLVHLELYRGAYARVKLLDRNQRDEISSNWTEMTFVPLRKEFASIENLSCVFYNIEYMNCTWDISEIAPQDSQFVLFYREDEQNDTHTCEKYHTQLRRNIGCYSQRYNGSLFSEGFICVAETSNPEARPHCRMITPSSFYILNPPMNFKLKSPSHMATWELGEDYSYHVPCYTFQINIIDWRGNTSKVENVSSTRFAINTNPVEGFSVQVRATMNYNCYESSLWSKWSRTITRKPEAMECSHSAAVMLSVICFVFMTLPLAFIFRRYRLWEKLYQPIPDPKQMFKGLYENYNGDFQNWIKSLPMTEKNEECIPATVKEEESFAPEKSGMT

Target ORF information:

RefSeq Version	XM_007891065.1
Organism	Callorhinchus milii(elephant shark)
Definition	Callorhinchus milii interleukin 3 receptor, alpha (low affinity) (il3ra), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_007891065.1

ORF Insert Sequence:

ATGCAGCTCT TGCAAGTTTC CTTGCTAATG GCCGCCCTTT GGTTGCTGCC AGTGAATGGA 
GTGCCCATCA TGTCTCTCAA GGAAAGGGTG GAGATGAACC AGCCTACAGA CCTGAGGCTC 
ACCCCCCAAC GGCTTGGGGA GTTCATGTTC ACTTGGACTG GAAACCTTTC TGGGCTGAAC 
AGAACCGATT GCAAGTTATA CTACAAGCTC TGCTACAGAC ACCTGGACTC AAAGGAGGAA 
TCGAGTGTCC TGGTTAAAAC CCATCACCAT CTGGTGCATT TGGAACTGTA TAGAGGGGCA 
TATGCCAGGG TGAAACTACT GGACAGGAAC CAGAGGGACG AAATATCAAG CAACTGGACT 
GAGATGACTT TTGTTCCATT GCGTAAAGAG TTTGCCTCGA TTGAAAATCT ATCATGTGTC 
TTTTATAACA TTGAATATAT GAACTGCACG TGGGACATTA GTGAGATAGC GCCACAAGAC 
TCACAGTTTG TACTGTTTTA CAGAGAAGAT GAGCAGAATG ACACGCACAC TTGCGAGAAG 
TATCACACGC AGCTGCGGAG GAACATTGGC TGTTACTCAC AGAGATACAA CGGCAGCTTG 
TTCAGTGAGG GCTTCATTTG CGTCGCTGAG ACCAGCAACC CGGAAGCTCG TCCCCATTGT 
AGAATGATCA CTCCGAGTTC CTTCTACATT CTCAACCCTC CGATGAACTT TAAATTAAAA 
TCTCCCAGTC ATATGGCTAC ATGGGAGCTG GGAGAGGATT ATTCATATCA CGTGCCTTGT 
TACACTTTCC AAATAAATAT CATAGACTGG AGAGGCAATA CTTCAAAGGT TGAAAATGTG 
AGCTCAACAC GATTCGCCAT AAATACAAAT CCAGTTGAAG GATTTTCAGT CCAAGTAAGG 
GCAACAATGA ATTACAACTG TTACGAAAGT TCTCTCTGGA GCAAGTGGAG TCGGACAATC 
ACAAGAAAGC CCGAAGCAAT GGAATGCTCC CATTCAGCAG CTGTGATGTT GTCTGTGATT 
TGCTTTGTGT TCATGACGCT GCCCCTTGCT TTCATCTTCA GGAGATACAG ATTATGGGAA 
AAACTGTACC AACCAATCCC CGACCCGAAG CAGATGTTCA AGGGCCTGTA CGAAAACTAC 
AATGGCGACT TTCAGAACTG GATTAAAAGT CTTCCGATGA CAGAGAAAAA TGAAGAATGC 
ATTCCAGCCA CAGTCAAAGA AGAAGAGAGT TTTGCCCCAG AAAAGTCTGG AATGACATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Elephant shark genome provides unique insights into gnathostome evolution.
Nature505(7482)174-9(2014 Jan)
Venkatesh B,Lee AP,Ravi V,Maurya AK,Lian MM,Swann JB,Ohta Y,Flajnik MF,Sutoh Y,Kasahara M,Hoon S,Gangu V,Roy SW,Irimia M,Korzh V,Kondrychyn I,Lim ZW,Tay BH,Tohari S,Kong KW,Ho S,Lorente-Galdos B,Quilez J,Marques-Bonet T,Raney BJ,Ingham PW,Tay A,Hillier LW,Minx P,Boehm T,Wilson RK,Brenner S,Warren WC

Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii).
PloS one7(10)e47174(2012)
Tan YY,Kodzius R,Tay BH,Tay A,Brenner S,Venkatesh B