VSX1 cDNA ORF clone, Bos taurus(cattle)

Gene
Clones
gRNAs

Summary

Gene Symbol	VSX1
Entrez Gene ID	286802
Full Name	visual system homeobox 1
Synonyms	RINX
General protein information	Preferred Names visual system homeobox 1 Names visual system homeobox 1 homeodomain protein RINX retinal inner nuclear layer homeobox protein transcription factor VSX1
Gene Type	protein-coding
Organism	Bos taurus(cattle)

mRNA and Protein(s)

mRNA	Protein	Name
NM_174767.2	NP_777192.1	visual system homeobox 1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	VSX1	XP_001149985.1
Canis lupus familiaris (dog)	VSX1	XP_850138.1
Rattus norvegicus (Norway rat)	Vsx1	NP_001103016.1
Gallus gallus (chicken)	VSX1	NP_990100.1
	LOC715973	XP_002798304.1
Bos taurus (cattle)	VSX1	NP_777192.1
Mus musculus (house mouse)	Vsx1	NP_473409.1
Homo sapiens (human)	VSX1	NP_055403.2

Gene Ontology
Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

RINX(VSX1), a novel homeobox gene expressed in the inner nuclear layer of the adult retina.
Hayashi T, Huang J, Deeb SS
Genomics67(2)128-39(2000 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following VSX1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VSX1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBa41374	NM_174767.2 Latest version!	Bos taurus visual system homeobox 1 (VSX1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

VSX1 ( NM_174767.2 ) cDNA ORF clone, Bos taurus(cattle) -> NP_777192.1 Bos taurus visual system homeobox 1 (VSX1), mRNA.

Price & Availability↑

CloneID	OBa41374
Clone ID Related Accession (Same CDS sequence)	NM_174767.2
Accession Version	NM_174767.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-18
Organism	Bos taurus(cattle)
Product	visual system homeobox 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF251032.1. On Jun 3, 2003 this sequence version replaced NM_174767.1. ##Evidence-Data-START## Transcript exon combination :: AF251032.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145491 [ECO:0000348] ##Evidence-Data-END##

ATGACCGGCA GAGACGCGCT TTCCGACGGG CGTGCCAGAA GCAGGGCGCT GGTGCCCGGA 
GGCCCGTCCA CCGGCTCGCG CCCCCGGGGC TTCGCCATCA CCGACCTGCT GGGCCTGGAG 
GCCGAGCTGC CCGCACCTGA GGGCCCCGGG CCGGGATCTG GGTGCGAAGG CCCGGCAGCC 
GCGCCCCGCG CGGGCCCAGG ACTCGGAGGC TCCTGCCCGG CACGCGGAGC CCTTCCGTTG 
GGCCTCGGCC TCCTCTGCGG TTTCGGCGCT CAGCCCCCTG CGGCTGCCCG GGCACCCTGC 
CTGCTCCTCG CCGACGTGCC CTTCCTGCCG CCCGAGGGGC CTGAGCCCCT CGCCCCGCGC 
TTCCCCGGCC GCCCACCGCC CTCGGCCGCC CGCCAGAAAC GTAGCGAGAG CGTGTCGACG 
TCCGATGAAG ACAGCCCTTC TGAAGACAGG AGTGACCGGA AGGCGTCCCC AGCCCCCAGC 
AAAAGGAAAA AGAGGAGGCA CAGGACCGTT TTCACTGCCC ACCAACTGGA AGAGCTGGAG 
AAGGCCTTCA GTGAGGCCCA CTACCCTGAT GTGTATGCCC GGGAAATGCT GGCCATGAAG 
ACTGAACTCC CCGAAGACCG AATACAGGTC TGGTTTCAAA ACCGGCGGGC CAAGTGGCGG 
AAGCGAGAGA AGCGCTGGGG CGGCAGCAGC GTGATGGCCG AATATGGGCT CTACGGGGCG 
ATGGTGCGCC ACTGCATCCC GCTGCCTGAC TCCGTCCTGG GCTCTGGGGA GGGCGGCCTG 
CTGGGCTCCT GCGCACCCTG GCTCCTGGGG ATGCATAAAA AATCTGCAGG GACAATAAGG 
AAAGCAGAAA GTGAAGAAAA GCTGGCAGGA CTCTGGGGCT CTGACCACCT CAAGGAAGGT 
TCTAGCCCCC ATCAGGCAGG ACCCCAGAGG GGCTTGGAGG AAGGCAGTCC TGTGAGCGGT 
GTGGAAGACG TGGTCATTGA TCTCTCCAGC TCCACACGCC AGGAGACTGA TAGAGCACAG 
CAGGGGGTCG GGGCCCAAGG ACGTCCAGAC TCTGAGGGGC TAGAGGGGCT CCAACCTGGG 
AAGGAGGGGG CCTTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_777192.1
CDS	40..1137
Translation	MTGRDALSDGRARSRALVPGGPSTGSRPRGFAITDLLGLEAELPAPEGPGPGSGCEGPAAAPRAGPGLGGSCPARGALPLGLGLLCGFGAQPPAAARAPCLLLADVPFLPPEGPEPLAPRFPGRPPPSAARQKRSESVSTSDEDSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLGSGEGGLLGSCAPWLLGMHKKSAGTIRKAESEEKLAGLWGSDHLKEGSSPHQAGPQRGLEEGSPVSGVEDVVIDLSSSTRQETDRAQQGVGAQGRPDSEGLEGLQPGKEGAL

Target ORF information:

RefSeq Version	NM_174767.2
Organism	Bos taurus(cattle)
Definition	Bos taurus visual system homeobox 1 (VSX1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_174767.2

ORF Insert Sequence:

ATGACCGGCA GAGACGCGCT TTCCGACGGG CGTGCCAGAA GCAGGGCGCT GGTGCCCGGA 
GGCCCGTCCA CCGGCTCGCG CCCCCGGGGC TTCGCCATCA CCGACCTGCT GGGCCTGGAG 
GCCGAGCTGC CCGCACCTGA GGGCCCCGGG CCGGGATCTG GGTGCGAAGG CCCGGCAGCC 
GCGCCCCGCG CGGGCCCAGG ACTCGGAGGC TCCTGCCCGG CACGCGGAGC CCTTCCGTTG 
GGCCTCGGCC TCCTCTGCGG TTTCGGCGCT CAGCCCCCTG CGGCTGCCCG GGCACCCTGC 
CTGCTCCTCG CCGACGTGCC CTTCCTGCCG CCCGAGGGGC CTGAGCCCCT CGCCCCGCGC 
TTCCCCGGCC GCCCACCGCC CTCGGCCGCC CGCCAGAAAC GTAGCGAGAG CGTGTCGACG 
TCCGATGAAG ACAGCCCTTC TGAAGACAGG AGTGACCGGA AGGCGTCCCC AGCCCCCAGC 
AAAAGGAAAA AGAGGAGGCA CAGGACCGTT TTCACTGCCC ACCAACTGGA AGAGCTGGAG 
AAGGCCTTCA GTGAGGCCCA CTACCCTGAT GTGTATGCCC GGGAAATGCT GGCCATGAAG 
ACTGAACTCC CCGAAGACCG AATACAGGTC TGGTTTCAAA ACCGGCGGGC CAAGTGGCGG 
AAGCGAGAGA AGCGCTGGGG CGGCAGCAGC GTGATGGCCG AATATGGGCT CTACGGGGCG 
ATGGTGCGCC ACTGCATCCC GCTGCCTGAC TCCGTCCTGG GCTCTGGGGA GGGCGGCCTG 
CTGGGCTCCT GCGCACCCTG GCTCCTGGGG ATGCATAAAA AATCTGCAGG GACAATAAGG 
AAAGCAGAAA GTGAAGAAAA GCTGGCAGGA CTCTGGGGCT CTGACCACCT CAAGGAAGGT 
TCTAGCCCCC ATCAGGCAGG ACCCCAGAGG GGCTTGGAGG AAGGCAGTCC TGTGAGCGGT 
GTGGAAGACG TGGTCATTGA TCTCTCCAGC TCCACACGCC AGGAGACTGA TAGAGCACAG 
CAGGGGGTCG GGGCCCAAGG ACGTCCAGAC TCTGAGGGGC TAGAGGGGCT CCAACCTGGG 
AAGGAGGGGG CCTTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL

RINX(VSX1), a novel homeobox gene expressed in the inner nuclear layer of the adult retina.
Genomics67(2)128-39(2000 Jul)
Hayashi T,Huang J,Deeb SS