BmR1_04g07085 cDNA ORF clone, Babesia microti strain RI

Gene
Clones
gRNAs

Summary

Gene Symbol	BmR1_04g07085
Entrez Gene ID	24426064
Full Name	conserved Plasmodium protein, unknown function
Synonyms	BBM_III07085
Gene Type	protein-coding
Organism	Babesia microti strain RI

mRNA and Protein(s)

mRNA	Protein	Name
XM_012794566.1	XP_012650020.1	conserved Plasmodium protein, unknown function

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Genome-wide diversity and gene expression profiling of Babesia microti isolates identify polymorphic genes that mediate host-pathogen interactions.
Silva JC, Cornillot E, McCracken C, Usmani-Brown S, Dwivedi A, Ifeonu OO, Crabtree J, Gotia HT, Virji AZ, Reynes C, Colinge J, Kumar V, Lawres L, Pazzi JE, Pablo JV, Hung C, Brancato J, Kumari P, Orvis J, Tretina K, Chibucos M, Ott S, Sadzewicz L, Sengamalay N, Shetty AC, Su Q, Tallon L, Fraser CM, Frutos R, Molina DM, Krause PJ, Ben Mamoun C
Scientific reports635284(2016 Oct)

Whole genome mapping and re-organization of the nuclear and mitochondrial genomes of Babesia microti isolates.
Cornillot E, Dassouli A, Garg A, Pachikara N, Randazzo S, Depoix D, Carcy B, Delbecq S, Frutos R, Silva JC, Sutton R, Krause PJ, Mamoun CB
PloS one8(9)e72657(2013)

Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti.
Cornillot E, Hadj-Kaddour K, Dassouli A, Noel B, Ranwez V, Vacherie B, Augagneur Y, Br?s V, Duclos A, Randazzo S, Carcy B, Debierre-Grockiego F, Delbecq S, Moubri-M?nage K, Shams-Eldin H, Usmani-Brown S, Bringaud F, Wincker P, Vivar?s CP, Schwarz RT, Schetters TP, Krause PJ, Gorenflot A, Berry V, Barbe V, Ben Mamoun C
Nucleic acids research40(18)9102-14(2012 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following BmR1_04g07085 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BmR1_04g07085 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBa210636	XM_012794566.1 Latest version!	Babesia microti strain RI conserved Plasmodium protein, unknown function partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

BmR1_04g07085 ( XM_012794566.1 ) cDNA ORF clone, Babesia microti strain RI -> XP_012650020.1 Babesia microti strain RI conserved Plasmodium protein, unknown function partial mRNA.

Price & Availability↑

CloneID	OBa210636
Clone ID Related Accession (Same CDS sequence)	XM_012794566.1
Accession Version	XM_012794566.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2478bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-12
Organism	Babesia microti strain RI
Product	conserved Plasmodium protein, unknown function
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_034969). COMPLETENESS: incomplete on both ends.

ATGGTCGAAG GATTTTCCAC TGGATTAACT GAAAGCAGTC AACCCAATAA AACTTGTGAT 
AATTTTTTGT GCAAACATGT GGATTTCGTT AAGCGAAATT TTGTAGAAGG TGTGCTGCGC 
ATATCACACA ACGAAGTGCT GCAATCTGCG CTGGATATTT GTTACATTCC AGGGTGCAGT 
GCGGCAAAAA TTTTGGCATT GCCTAATGAT ATGGGTGAAC CTCCAATAAA AACTGTTTCT 
CCTATCAATT TTATTGGCAT AGGTCTCAAG ACAAACCAAT GTATTAAATC CCTTCTAGAC 
AAATGGTATA TTGCGTATTT GCCCATCAAC TTCAATTCTA TGGGACATGA CTTGTATAAC 
ATTTCTATGC GCCTCGTTGA CATAATTGGC ACGGGCTCAC TGTTCAAAAG TGGTGTGATT 
GATAAATCTT ATCAATTGCC CTGGCATAGT CAATCTTCAA TATTCACAAC ACCTAGCTGT 
GCTTACGCGG GGTTAGATGA ACTGGCTAGT ATGATTGATT ATCCGAAACT CAGATGCAAA 
CTACAGCTTG TGATCCAAGT GCTAGAGCAG CCAGGAACTT ATAGCGTAAG TAAGCGCAGT 
CTTTACTATG AAACACACGC AGACAGAGGA AAGGATAAGC ATTTTTTAGA CAATGAAATA 
GAATGGCATA GTACTAGTAT AGATACAATT ATACCATTGC GATTGTTGGT ACGAATTTTG 
CCCCAAAATG CGCAAACTTT TGCACAAAAG AATAGTCTTA GACTGCAATT ATCCATACCT 
AGATCCAACG AGGTTATTCA AAGTGGTGTC AAGCTGTCTG GTAAAACTGG GTCAGATAAA 
TCTCAAATTT TGAACTTATA CTTATCAATA CCTGTATACT CTGGTGAATT AGGATTGGAG 
CTAGTTAGGG AGGAACCATT CACCAAGCTT AAAGGTTGTA TCAAAAACAA CGAAGTGTGC 
TTACGATGGT ATACATGTAT TACCAATTGC GTAAATGTCG TGGATTATGT ATTAACAAAT 
TGCATACGTT CTGATGGGTT GGAAAAGGGT ATATCATTGG AAGATCCTCA ATATGGAGTT 
TTAGGATTTT GTCTCCCATG GTGTAGCGAA CAAAATCGAA TTTTATTCTA CTTCAAATCA 
CTGCTCAACT CGCGGCATGT GGAATGGTCA CCTAATGAAA AGATTTGGAA AGTACCATCA 
ATACATATTT ATACAGTTGC CAAGTTTGTC CAGTATTTGG GGGGGTCAAT TGATCCATCT 
GTAGAATCTC ATGTCGCAGC ATACATAAGC AAACTAAAAG GCAAAGCTGT GAATGCTTAT 
GAAGAGTTGT GCAGCACTGG CGTGTGGAAA TATACGCACA TACTTTTGGC ATCGAAGAAT 
AAATATCAAC AGCTAAATTT TAGCTTCTAC CCCTTTGACA AACGAATTGT AGAGCTGGCT 
AAGAGTTGTA AAATGAAGTG GAATCAGAAT GGTAATTTAT GGGAGATGCA ATTGGTGCAA 
TTACCTCAGT TAATATCGCA TTTAAAACGC AGTTTCGAAA CAATCCTTCC ACATGGCAAA 
TTGGACGCTA TAGCAGCTCA GTTTGGAGTC AAAATTCACA AAACAAATAG TAGCATTTCA 
AAGCATACCC TCAACTATGT TAGTGTCGAT AAGGTTGCTA ATAGTACTAG GAACACAATT 
AAACGAGAGA GAAATGAAGT GACATGCATA TTAATAACAG CTGCAGGTAA AGAGCCACAT 
CTACATCGCA TCGTATCTAA AATTGTGAGT GTCATTTGCA CAATTTCTCC TCCAGCTTCT 
AGCATAGATG ACTGTGGCAA TATAGTAACT GGCGGGCCTG GTACCGGGGG GATAAAGTTT 
ATCCAGTCGC CCAGAGGAAT TGAAGAATGG AACCAAATAA GCTTCTGCGT CATCCCATCC 
GGAGAACGCA TTGATGATCT GCTTTCTAAA TACGATATAA ATATCTTATG CTCACTTGTT 
GGCGAAGTAT TCATTTTCAC AGAAAAAGCA TTAGATTGGT TGCTAAGTAA TTGTGAAAGA 
TGGCCAGATC CTAGTGATTC AATTAGGTAC AAGCATTGGA ATGAAGTAAT GTTGGAAAAT 
GAGGGGGCGT TGTGGGATGG GAACAATTTT AACTCTCGGC AACAACTGGC ACAGGAACGT 
CTATTTTGCG ATGAGGAATT TCACATTGTG GGTGAAAGGA ATGATCCGAC AGTTAGATTG 
TGCACACTTT TGATCCAATT AGGGAATGGA AAACTTGTAT CCAACCCAAA GCACGCCGAA 
TATGTTGTAA TCACAGATAG CAAGTCAGAT GATGCCATGT TAATGAAAAG CAAATTTTGG 
AAGAATGATG AAGATATAAT TTCCAGAACG CACGGCGCGA GGCATTCGAC ACTTGTAACG 
CCAAAATTCA TCTATGACTG TATCACTACT TGGAAGTTAC AGCGACCTAG TAGGGGGCAG 
AAGCATTTGG CATTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012650020.1
CDS	1..2478
Translation	MVEGFSTGLTESSQPNKTCDNFLCKHVDFVKRNFVEGVLRISHNEVLQSALDICYIPGCSAAKILALPNDMGEPPIKTVSPINFIGIGLKTNQCIKSLLDKWYIAYLPINFNSMGHDLYNISMRLVDIIGTGSLFKSGVIDKSYQLPWHSQSSIFTTPSCAYAGLDELASMIDYPKLRCKLQLVIQVLEQPGTYSVSKRSLYYETHADRGKDKHFLDNEIEWHSTSIDTIIPLRLLVRILPQNAQTFAQKNSLRLQLSIPRSNEVIQSGVKLSGKTGSDKSQILNLYLSIPVYSGELGLELVREEPFTKLKGCIKNNEVCLRWYTCITNCVNVVDYVLTNCIRSDGLEKGISLEDPQYGVLGFCLPWCSEQNRILFYFKSLLNSRHVEWSPNEKIWKVPSIHIYTVAKFVQYLGGSIDPSVESHVAAYISKLKGKAVNAYEELCSTGVWKYTHILLASKNKYQQLNFSFYPFDKRIVELAKSCKMKWNQNGNLWEMQLVQLPQLISHLKRSFETILPHGKLDAIAAQFGVKIHKTNSSISKHTLNYVSVDKVANSTRNTIKRERNEVTCILITAAGKEPHLHRIVSKIVSVICTISPPASSIDDCGNIVTGGPGTGGIKFIQSPRGIEEWNQISFCVIPSGERIDDLLSKYDINILCSLVGEVFIFTEKALDWLLSNCERWPDPSDSIRYKHWNEVMLENEGALWDGNNFNSRQQLAQERLFCDEEFHIVGERNDPTVRLCTLLIQLGNGKLVSNPKHAEYVVITDSKSDDAMLMKSKFWKNDEDIISRTHGARHSTLVTPKFIYDCITTWKLQRPSRGQKHLAF

Target ORF information:

RefSeq Version	XM_012794566.1
Organism	Babesia microti strain RI
Definition	Babesia microti strain RI conserved Plasmodium protein, unknown function partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012794566.1

ORF Insert Sequence:

ATGGTCGAAG GATTTTCCAC TGGATTAACT GAAAGCAGTC AACCCAATAA AACTTGTGAT 
AATTTTTTGT GCAAACATGT GGATTTCGTT AAGCGAAATT TTGTAGAAGG TGTGCTGCGC 
ATATCACACA ACGAAGTGCT GCAATCTGCG CTGGATATTT GTTACATTCC AGGGTGCAGT 
GCGGCAAAAA TTTTGGCATT GCCTAATGAT ATGGGTGAAC CTCCAATAAA AACTGTTTCT 
CCTATCAATT TTATTGGCAT AGGTCTCAAG ACAAACCAAT GTATTAAATC CCTTCTAGAC 
AAATGGTATA TTGCGTATTT GCCCATCAAC TTCAATTCTA TGGGACATGA CTTGTATAAC 
ATTTCTATGC GCCTCGTTGA CATAATTGGC ACGGGCTCAC TGTTCAAAAG TGGTGTGATT 
GATAAATCTT ATCAATTGCC CTGGCATAGT CAATCTTCAA TATTCACAAC ACCTAGCTGT 
GCTTACGCGG GGTTAGATGA ACTGGCTAGT ATGATTGATT ATCCGAAACT CAGATGCAAA 
CTACAGCTTG TGATCCAAGT GCTAGAGCAG CCAGGAACTT ATAGCGTAAG TAAGCGCAGT 
CTTTACTATG AAACACACGC AGACAGAGGA AAGGATAAGC ATTTTTTAGA CAATGAAATA 
GAATGGCATA GTACTAGTAT AGATACAATT ATACCATTGC GATTGTTGGT ACGAATTTTG 
CCCCAAAATG CGCAAACTTT TGCACAAAAG AATAGTCTTA GACTGCAATT ATCCATACCT 
AGATCCAACG AGGTTATTCA AAGTGGTGTC AAGCTGTCTG GTAAAACTGG GTCAGATAAA 
TCTCAAATTT TGAACTTATA CTTATCAATA CCTGTATACT CTGGTGAATT AGGATTGGAG 
CTAGTTAGGG AGGAACCATT CACCAAGCTT AAAGGTTGTA TCAAAAACAA CGAAGTGTGC 
TTACGATGGT ATACATGTAT TACCAATTGC GTAAATGTCG TGGATTATGT ATTAACAAAT 
TGCATACGTT CTGATGGGTT GGAAAAGGGT ATATCATTGG AAGATCCTCA ATATGGAGTT 
TTAGGATTTT GTCTCCCATG GTGTAGCGAA CAAAATCGAA TTTTATTCTA CTTCAAATCA 
CTGCTCAACT CGCGGCATGT GGAATGGTCA CCTAATGAAA AGATTTGGAA AGTACCATCA 
ATACATATTT ATACAGTTGC CAAGTTTGTC CAGTATTTGG GGGGGTCAAT TGATCCATCT 
GTAGAATCTC ATGTCGCAGC ATACATAAGC AAACTAAAAG GCAAAGCTGT GAATGCTTAT 
GAAGAGTTGT GCAGCACTGG CGTGTGGAAA TATACGCACA TACTTTTGGC ATCGAAGAAT 
AAATATCAAC AGCTAAATTT TAGCTTCTAC CCCTTTGACA AACGAATTGT AGAGCTGGCT 
AAGAGTTGTA AAATGAAGTG GAATCAGAAT GGTAATTTAT GGGAGATGCA ATTGGTGCAA 
TTACCTCAGT TAATATCGCA TTTAAAACGC AGTTTCGAAA CAATCCTTCC ACATGGCAAA 
TTGGACGCTA TAGCAGCTCA GTTTGGAGTC AAAATTCACA AAACAAATAG TAGCATTTCA 
AAGCATACCC TCAACTATGT TAGTGTCGAT AAGGTTGCTA ATAGTACTAG GAACACAATT 
AAACGAGAGA GAAATGAAGT GACATGCATA TTAATAACAG CTGCAGGTAA AGAGCCACAT 
CTACATCGCA TCGTATCTAA AATTGTGAGT GTCATTTGCA CAATTTCTCC TCCAGCTTCT 
AGCATAGATG ACTGTGGCAA TATAGTAACT GGCGGGCCTG GTACCGGGGG GATAAAGTTT 
ATCCAGTCGC CCAGAGGAAT TGAAGAATGG AACCAAATAA GCTTCTGCGT CATCCCATCC 
GGAGAACGCA TTGATGATCT GCTTTCTAAA TACGATATAA ATATCTTATG CTCACTTGTT 
GGCGAAGTAT TCATTTTCAC AGAAAAAGCA TTAGATTGGT TGCTAAGTAA TTGTGAAAGA 
TGGCCAGATC CTAGTGATTC AATTAGGTAC AAGCATTGGA ATGAAGTAAT GTTGGAAAAT 
GAGGGGGCGT TGTGGGATGG GAACAATTTT AACTCTCGGC AACAACTGGC ACAGGAACGT 
CTATTTTGCG ATGAGGAATT TCACATTGTG GGTGAAAGGA ATGATCCGAC AGTTAGATTG 
TGCACACTTT TGATCCAATT AGGGAATGGA AAACTTGTAT CCAACCCAAA GCACGCCGAA 
TATGTTGTAA TCACAGATAG CAAGTCAGAT GATGCCATGT TAATGAAAAG CAAATTTTGG 
AAGAATGATG AAGATATAAT TTCCAGAACG CACGGCGCGA GGCATTCGAC ACTTGTAACG 
CCAAAATTCA TCTATGACTG TATCACTACT TGGAAGTTAC AGCGACCTAG TAGGGGGCAG 
AAGCATTTGG CATTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Genome-wide diversity and gene expression profiling of Babesia microti isolates identify polymorphic genes that mediate host-pathogen interactions.
Scientific reports635284(2016 Oct)
Silva JC,Cornillot E,McCracken C,Usmani-Brown S,Dwivedi A,Ifeonu OO,Crabtree J,Gotia HT,Virji AZ,Reynes C,Colinge J,Kumar V,Lawres L,Pazzi JE,Pablo JV,Hung C,Brancato J,Kumari P,Orvis J,Tretina K,Chibucos M,Ott S,Sadzewicz L,Sengamalay N,Shetty AC,Su Q,Tallon L,Fraser CM,Frutos R,Molina DM,Krause PJ,Ben Mamoun C

Whole genome mapping and re-organization of the nuclear and mitochondrial genomes of Babesia microti isolates.
PloS one8(9)e72657(2013)
Cornillot E,Dassouli A,Garg A,Pachikara N,Randazzo S,Depoix D,Carcy B,Delbecq S,Frutos R,Silva JC,Sutton R,Krause PJ,Mamoun CB

Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti.
Nucleic acids research40(18)9102-14(2012 Oct)
Cornillot E,Hadj-Kaddour K,Dassouli A,Noel B,Ranwez V,Vacherie B,Augagneur Y,Br?s V,Duclos A,Randazzo S,Carcy B,Debierre-Grockiego F,Delbecq S,Moubri-M?nage K,Shams-Eldin H,Usmani-Brown S,Bringaud F,Wincker P,Vivar?s CP,Schwarz RT,Schetters TP,Krause PJ,Gorenflot A,Berry V,Barbe V,Ben Mamoun C

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BmR1_04g07085 cDNA ORF clone, Babesia microti strain RI

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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