LOC108692239 cDNA ORF clone, Atta colombica

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108692239
Entrez Gene ID	108692239
Full Name	protein expanded
Gene Type	protein-coding
Organism	Atta colombica

mRNA and Protein(s)

mRNA	Protein	Name
XM_018200414.1	XP_018055903.1	LOW QUALITY PROTEIN: protein expanded

Pathways from BioSystems
Gene Ontology

The following LOC108692239 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108692239 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAt90858	XM_018200414.1 Latest version!	Atta colombica protein expanded (LOC108692239), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108692239 ( XM_018200414.1 ) cDNA ORF clone, Atta colombica -> XP_018055903.1 Atta colombica protein expanded (LOC108692239), mRNA.

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CloneID	OAt90858
Clone ID Related Accession (Same CDS sequence)	XM_018200414.1
Accession Version	XM_018200414.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3924bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-18
Organism	Atta colombica
Product	LOW QUALITY PROTEIN: protein expanded
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017259557.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta colombica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGAAGCATG CAGCATGCGT GGTAGCGGTG ACGGCTGCGC GGTCTTGCCT TCAACCCCTG 
GTGTCCGCCA GCCGCTATCT CGCCATTCAT GCCCTTCCCG GTGATCCTCT CTACTTCATC 
GTTGAGGCTA AGTCGAGAGT AAAGGAGGTT TATACGCAGA CATGCACACT TCTCAGCCAA 
CAGGGCATGC GAGATTGCGA ACTTTTTGGT TTGGCTATAT TGTCCGACGG CGAATACCTA 
TTTGTGGATC CTGAGAATAA GCTGAGCAAA TACGCCCCAA AGAATTGGCG AAATTCTCAT 
ACATATGGTT TGGATAGCAG TGGAAGACCA GCCTTTGTCC TATACTTTCG AGTTCGTTTC 
TATATCGATA CACCATTACT TTTAAGCGAT GAGACGACAC GGCATCATTA TTACCTGCAA 
CTGCGCGACA ATGTCGTCAG GCACGGCGGT GGGGTGGAGA GCCTCCATCC TCACCATCCC 
CTTCATGAAC CATCTATCGT CACGTCATTG TTGGTGCTCG CTGGGCTTGC CCTTCAAGCC 
GACCTTGGCG ATTATTCCGA AGAACGTCAC AGACCGCATG CAGGATCTGT CGGTTATTGC 
AAATCCACGG ATTACCTTCC TTCCCATATG TGCCTCGAGT CGAACGTGCT CACCGTGCTT 
GCAGCCCAGC ACAGAGAGTA CAGTGGGCTC TCTAGAGAGG AGGCAGAGTT GCAATATATC 
CGGGAGGCAG TGCTGTTGGA GGCGCCGCTC AACGCTCACC TGTATCGGTT GCGCCGAAGT 
AAGAACGAGG CGGGACCGGG CCGCATACTC CTGGCAATTT GCGCTCGTGG AGTGCGAATC 
TACGCCGAGG AGGAGACGCC GCGCGTTTTC GCTTGGAACA ATATCGGCAA ACTCTCTTTT 
GATCGCAAAA AATTCGAAAT CCGTGCAGTT GATCAGCCGG AAAAACTTAC CCTCTACAGC 
GGATGTGATG ACAAGAGTAA ACTCCTCTTG GGACTTTGCC GTGACACCCA TCAGTTCTCT 
ATGGCTATAG CGCCTAGAGT AAATGAAGCT ATGAAACGAG AAGAAGAAGA ACGGAAAGTC 
TTGAGGGATT GTTACATGTA CCCTACTCGA TGTAAGTTGA GTTTAGCGAC GCGCGGTGCG 
CGTGGTGATC AACGAATTTC TGTCATCTCG AGTACATCCT CGAATACAAC ATCTGGTATT 
GTCAGCGATC GGGTGCATAG CGAAGATGAA CCTGATACTG CACCAGCATC GACCGAATGT 
TTGCCTCGTC TTACCTTAGA AACGATATCT TATTCAGATG GCCAGAGTAG AGTTTTAAAT 
GGCACGAATG GGGATACAGA TAATCACTCT ATGCCACCTT CTTCCGTTTC TGTTATTGAC 
GAGATTGACA ATTCCGACGC CACTTCTACA TCGGTGGTAT TACGTCTCGC GTCAAGTGCC 
GCGACCGCCG CCGAGGGCTC ACAATGCAGC AGCAGTTGCA GTACAGTAGT TGTCGTTAAT 
ACATCCACAG GCGGACCATC GCGAATGCGC CGGGCTTCTG CGACCTCTAG TTTGGAGTTA 
GGTTACTCGC ATACAGCACA AAATTCGACA ATTTCCACGG AGACAGCTAG TTTTCCGGGT 
GCTATTTATG ACAGGTGTAA GAAGACAGGT AAATATACAG GTACTGATAT TGCGAGCGAG 
ACTAGTGGCG TGTATACACT GAGAAGCAGT GAGATTCAAG ACGAAAGAAT CGGCGATGAT 
TTGTATTTGC CTACGGGTGA TACCAACGCA TCCTCTGCGG CGAGCGATGT TTGTGCCTTG 
AGCTCCGTTC AGTCTACCAC TGATGAAGCG TCTATCACAT CCGGTTTCTA TACTATTCAC 
AGTGGATTAC GATCTGAAAG CAGTTATACG GAAGACGTCG GCGCGGAAGA TCAGGAACCG 
ATATATAGTC TTTGCAAAGG TGACGACGAC GAGGTCTCCT TGAACCGACA GCTCGAAGAT 
TCACGCTCGC GAAGCAATAG CATACTCAGC GTGAGCAGTT TCCGAGGCGA TGGTAGCGAT 
CCATCCAAAG CGAGGCCGTT ATTGTCGGCT GACGAGTTAT CGGATTTGAT AGTCGGCAGG 
TATCCCCCAC GTAAAACTAT TAGCAATTCG ATGGACTCGG ACTGCGATTA CGTGACGATG 
CCACCTCCAC CTCCGCCGCC ACCTAGAACG GACAGTGATC GACAATTACC GCCGCCATAT 
CCGATAGAAA GCATTGACTA CGCAACAATC AACGTTTCAA AGAGATCCGG CATACCGGAA 
TTGGCTCGGG AACGTGAACC ACCTCCGCCA CCACCATACA ACAAAACTTG CAGTGACTTC 
GTCCCGTTAC CACCTAGACG AACCGATCCA CCACCGCCGC CACCTTCGTA TACATCGTCA 
CGAGAGAGGA TTCAAATACC ACCACCCACC CCACCACGAA ATGACGCGGT GACGCCACGA 
GAACCTCCAC CACCTCCGCC GCCCTATCCC GACATGTCAG CGACGATTGG CTCTGTAACG 
AAAGTAGTAA AAATCATCAA CGACGTCGCC GGAAATATCG CGCCACCAAA ACCACCGCCT 
AGGATCCAAC CTCCCACTTA CCCAGGCGAT AAAATGAAAC CCACACCTGT ACATGCTCCG 
GTTGCCGCTC TCGTAGTAGG TCCAAACAAT TACCTAGACG TACACGCTTC CCGAAGCGGT 
CCGGTACTTC TACCATATTT GACGACACCA CCGCCTCCGC CTCCTTTACC ACCGCCACCG 
ATAATACATC CGCGACAACC ACCGCCGCCA CCACCACCAC CGCCACCACC ATCAACGCAA 
CCAGCATCAA GTTTGGCGAC CGTCTATACG AGTCAGGTTT CTCGATCACA AATAGAACAG 
TACAAACAAC AACTTTATTC CGATGTTGAT TATGTTATGT TTCCGCTCAA AGATCCAGCG 
GTGTCGAAGC AAGAGTATAT CGACGCCAAA CAAGGTTCCC TTCTGGCGGC TATGGCGGCT 
TATCCGCCTC CACCGTATCC TTCCTTTAGC AAATCTTCAG TGATGTATCG TAGCACGCCA 
TACCTTCCCG GTTCCTCTTT TTCCTCGCAA TCCAAATATG CGTCCAACCA AAATCTCAGC 
TCTAGTGACA CAGGCAGTTC CAGCGGTAAT TATCTGCAAG GCAATCTGAA TAGTCACTAT 
GCTGCTAGCA CTAGTTCGCT GTATAGCGGT GCAACTTGTT CGTCTACGGG TAGTCACAGT 
CTCAGAAGAG AGCCGCCCGT ACCAACTCAC CCTCACACGT TGAATGCGTT CTCGCGGACC 
AAAAGTGACG AGAATATTCT CAAATGCTTG AATACCTTGT TCACAAATAA GATGCAGTCT 
CTACCGCAAT CCAAGCATCG CAGATTACCG CCACCGCCAC CACCACCGCC CTACGAAATA 
CAGAATCTTG ATAAGAATCA ACCACTGCCA TCGTCTTCTT CAGTGGCAAC TTCCTCGTTG 
GTAACTACGA CAACAAACAA ACTTAAGAAA CTCAGCAATG GTATAGAAGA AAATGATGAA 
AGGAAAAGTG ATGATATGTT AGATATCCGA ACGCTTCGCG AGAAAAGTCG TAATTTAGAT 
TTACCATTAA TTTCTGCGCT ATGTAACGAT CAATACCTGC TAAAGCAGAC AAAAGCTTTT 
GTTCTGCCGA AGCATCCCAG CGAAATAACT TCCACTGCTG TACCCATGAA GAGTGGTACA 
CGAAGCAATG GCACGACGTC CAGTAGGAGC AAGTATCCGG TGAGTGGACT GTCAACGACA 
CAAATACAGA AACCACTTAG AAAATCTTCA ACAAGCACTC ACAAGCATCC CTCTGAGATA 
AAGAGCAATG CCTACAAGGT CAATGTCTCT TCCACTGGGG TCTCGACTAT TAAAAAGGAC 
TTTACAAGGA CATCTCATTC CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018055903.1
CDS	631..4554
Translation	MKHAACVVAVTAARSCLQPLVSASRYLAIHALPGDPLYFIVEAKSRVKEVYTQTCTLLSQQGMRDCELFGLAILSDGEYLFVDPENKLSKYAPKNWRNSHTYGLDSSGRPAFVLYFRVRFYIDTPLLLSDETTRHHYYLQLRDNVVRHGGGVESLHPHHPLHEPSIVTSLLVLAGLALQADLGDYSEERHRPHAGSVGYCKSTDYLPSHMCLESNVLTVLAAQHREYSGLSREEAELQYIREAVLLEAPLNAHLYRLRRSKNEAGPGRILLAICARGVRIYAEEETPRVFAWNNIGKLSFDRKKFEIRAVDQPEKLTLYSGCDDKSKLLLGLCRDTHQFSMAIAPRVNEAMKREEEERKVLRDCYMYPTRCKLSLATRGARGDQRISVISSTSSNTTSGIVSDRVHSEDEPDTAPASTECLPRLTLETISYSDGQSRVLNGTNGDTDNHSMPPSSVSVIDEIDNSDATSTSVVLRLASSAATAAEGSQCSSSCSTVVVVNTSTGGPSRMRRASATSSLELGYSHTAQNSTISTETASFPGAIYDRCKKTGKYTGTDIASETSGVYTLRSSEIQDERIGDDLYLPTGDTNASSAASDVCALSSVQSTTDEASITSGFYTIHSGLRSESSYTEDVGAEDQEPIYSLCKGDDDEVSLNRQLEDSRSRSNSILSVSSFRGDGSDPSKARPLLSADELSDLIVGRYPPRKTISNSMDSDCDYVTMPPPPPPPPRTDSDRQLPPPYPIESIDYATINVSKRSGIPELAREREPPPPPPYNKTCSDFVPLPPRRTDPPPPPPSYTSSRERIQIPPPTPPRNDAVTPREPPPPPPPYPDMSATIGSVTKVVKIINDVAGNIAPPKPPPRIQPPTYPGDKMKPTPVHAPVAALVVGPNNYLDVHASRSGPVLLPYLTTPPPPPPLPPPPIIHPRQPPPPPPPPPPPSTQPASSLATVYTSQVSRSQIEQYKQQLYSDVDYVMFPLKDPAVSKQEYIDAKQGSLLAAMAAYPPPPYPSFSKSSVMYRSTPYLPGSSFSSQSKYASNQNLSSSDTGSSSGNYLQGNLNSHYAASTSSLYSGATCSSTGSHSLRREPPVPTHPHTLNAFSRTKSDENILKCLNTLFTNKMQSLPQSKHRRLPPPPPPPPYEIQNLDKNQPLPSSSSVATSSLVTTTTNKLKKLSNGIEENDERKSDDMLDIRTLREKSRNLDLPLISALCNDQYLLKQTKAFVLPKHPSEITSTAVPMKSGTRSNGTTSSRSKYPVSGLSTTQIQKPLRKSSTSTHKHPSEIKSNAYKVNVSSTGVSTIKKDFTRTSHS

Target ORF information:

RefSeq Version	XM_018200414.1
Organism	Atta colombica
Definition	Atta colombica protein expanded (LOC108692239), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018200414.1

ORF Insert Sequence:

ATGAAGCATG CAGCATGCGT GGTAGCGGTG ACGGCTGCGC GGTCTTGCCT TCAACCCCTG 
GTGTCCGCCA GCCGCTATCT CGCCATTCAT GCCCTTCCCG GTGATCCTCT CTACTTCATC 
GTTGAGGCTA AGTCGAGAGT AAAGGAGGTT TATACGCAGA CATGCACACT TCTCAGCCAA 
CAGGGCATGC GAGATTGCGA ACTTTTTGGT TTGGCTATAT TGTCCGACGG CGAATACCTA 
TTTGTGGATC CTGAGAATAA GCTGAGCAAA TACGCCCCAA AGAATTGGCG AAATTCTCAT 
ACATATGGTT TGGATAGCAG TGGAAGACCA GCCTTTGTCC TATACTTTCG AGTTCGTTTC 
TATATCGATA CACCATTACT TTTAAGCGAT GAGACGACAC GGCATCATTA TTACCTGCAA 
CTGCGCGACA ATGTCGTCAG GCACGGCGGT GGGGTGGAGA GCCTCCATCC TCACCATCCC 
CTTCATGAAC CATCTATCGT CACGTCATTG TTGGTGCTCG CTGGGCTTGC CCTTCAAGCC 
GACCTTGGCG ATTATTCCGA AGAACGTCAC AGACCGCATG CAGGATCTGT CGGTTATTGC 
AAATCCACGG ATTACCTTCC TTCCCATATG TGCCTCGAGT CGAACGTGCT CACCGTGCTT 
GCAGCCCAGC ACAGAGAGTA CAGTGGGCTC TCTAGAGAGG AGGCAGAGTT GCAATATATC 
CGGGAGGCAG TGCTGTTGGA GGCGCCGCTC AACGCTCACC TGTATCGGTT GCGCCGAAGT 
AAGAACGAGG CGGGACCGGG CCGCATACTC CTGGCAATTT GCGCTCGTGG AGTGCGAATC 
TACGCCGAGG AGGAGACGCC GCGCGTTTTC GCTTGGAACA ATATCGGCAA ACTCTCTTTT 
GATCGCAAAA AATTCGAAAT CCGTGCAGTT GATCAGCCGG AAAAACTTAC CCTCTACAGC 
GGATGTGATG ACAAGAGTAA ACTCCTCTTG GGACTTTGCC GTGACACCCA TCAGTTCTCT 
ATGGCTATAG CGCCTAGAGT AAATGAAGCT ATGAAACGAG AAGAAGAAGA ACGGAAAGTC 
TTGAGGGATT GTTACATGTA CCCTACTCGA TGTAAGTTGA GTTTAGCGAC GCGCGGTGCG 
CGTGGTGATC AACGAATTTC TGTCATCTCG AGTACATCCT CGAATACAAC ATCTGGTATT 
GTCAGCGATC GGGTGCATAG CGAAGATGAA CCTGATACTG CACCAGCATC GACCGAATGT 
TTGCCTCGTC TTACCTTAGA AACGATATCT TATTCAGATG GCCAGAGTAG AGTTTTAAAT 
GGCACGAATG GGGATACAGA TAATCACTCT ATGCCACCTT CTTCCGTTTC TGTTATTGAC 
GAGATTGACA ATTCCGACGC CACTTCTACA TCGGTGGTAT TACGTCTCGC GTCAAGTGCC 
GCGACCGCCG CCGAGGGCTC ACAATGCAGC AGCAGTTGCA GTACAGTAGT TGTCGTTAAT 
ACATCCACAG GCGGACCATC GCGAATGCGC CGGGCTTCTG CGACCTCTAG TTTGGAGTTA 
GGTTACTCGC ATACAGCACA AAATTCGACA ATTTCCACGG AGACAGCTAG TTTTCCGGGT 
GCTATTTATG ACAGGTGTAA GAAGACAGGT AAATATACAG GTACTGATAT TGCGAGCGAG 
ACTAGTGGCG TGTATACACT GAGAAGCAGT GAGATTCAAG ACGAAAGAAT CGGCGATGAT 
TTGTATTTGC CTACGGGTGA TACCAACGCA TCCTCTGCGG CGAGCGATGT TTGTGCCTTG 
AGCTCCGTTC AGTCTACCAC TGATGAAGCG TCTATCACAT CCGGTTTCTA TACTATTCAC 
AGTGGATTAC GATCTGAAAG CAGTTATACG GAAGACGTCG GCGCGGAAGA TCAGGAACCG 
ATATATAGTC TTTGCAAAGG TGACGACGAC GAGGTCTCCT TGAACCGACA GCTCGAAGAT 
TCACGCTCGC GAAGCAATAG CATACTCAGC GTGAGCAGTT TCCGAGGCGA TGGTAGCGAT 
CCATCCAAAG CGAGGCCGTT ATTGTCGGCT GACGAGTTAT CGGATTTGAT AGTCGGCAGG 
TATCCCCCAC GTAAAACTAT TAGCAATTCG ATGGACTCGG ACTGCGATTA CGTGACGATG 
CCACCTCCAC CTCCGCCGCC ACCTAGAACG GACAGTGATC GACAATTACC GCCGCCATAT 
CCGATAGAAA GCATTGACTA CGCAACAATC AACGTTTCAA AGAGATCCGG CATACCGGAA 
TTGGCTCGGG AACGTGAACC ACCTCCGCCA CCACCATACA ACAAAACTTG CAGTGACTTC 
GTCCCGTTAC CACCTAGACG AACCGATCCA CCACCGCCGC CACCTTCGTA TACATCGTCA 
CGAGAGAGGA TTCAAATACC ACCACCCACC CCACCACGAA ATGACGCGGT GACGCCACGA 
GAACCTCCAC CACCTCCGCC GCCCTATCCC GACATGTCAG CGACGATTGG CTCTGTAACG 
AAAGTAGTAA AAATCATCAA CGACGTCGCC GGAAATATCG CGCCACCAAA ACCACCGCCT 
AGGATCCAAC CTCCCACTTA CCCAGGCGAT AAAATGAAAC CCACACCTGT ACATGCTCCG 
GTTGCCGCTC TCGTAGTAGG TCCAAACAAT TACCTAGACG TACACGCTTC CCGAAGCGGT 
CCGGTACTTC TACCATATTT GACGACACCA CCGCCTCCGC CTCCTTTACC ACCGCCACCG 
ATAATACATC CGCGACAACC ACCGCCGCCA CCACCACCAC CGCCACCACC ATCAACGCAA 
CCAGCATCAA GTTTGGCGAC CGTCTATACG AGTCAGGTTT CTCGATCACA AATAGAACAG 
TACAAACAAC AACTTTATTC CGATGTTGAT TATGTTATGT TTCCGCTCAA AGATCCAGCG 
GTGTCGAAGC AAGAGTATAT CGACGCCAAA CAAGGTTCCC TTCTGGCGGC TATGGCGGCT 
TATCCGCCTC CACCGTATCC TTCCTTTAGC AAATCTTCAG TGATGTATCG TAGCACGCCA 
TACCTTCCCG GTTCCTCTTT TTCCTCGCAA TCCAAATATG CGTCCAACCA AAATCTCAGC 
TCTAGTGACA CAGGCAGTTC CAGCGGTAAT TATCTGCAAG GCAATCTGAA TAGTCACTAT 
GCTGCTAGCA CTAGTTCGCT GTATAGCGGT GCAACTTGTT CGTCTACGGG TAGTCACAGT 
CTCAGAAGAG AGCCGCCCGT ACCAACTCAC CCTCACACGT TGAATGCGTT CTCGCGGACC 
AAAAGTGACG AGAATATTCT CAAATGCTTG AATACCTTGT TCACAAATAA GATGCAGTCT 
CTACCGCAAT CCAAGCATCG CAGATTACCG CCACCGCCAC CACCACCGCC CTACGAAATA 
CAGAATCTTG ATAAGAATCA ACCACTGCCA TCGTCTTCTT CAGTGGCAAC TTCCTCGTTG 
GTAACTACGA CAACAAACAA ACTTAAGAAA CTCAGCAATG GTATAGAAGA AAATGATGAA 
AGGAAAAGTG ATGATATGTT AGATATCCGA ACGCTTCGCG AGAAAAGTCG TAATTTAGAT 
TTACCATTAA TTTCTGCGCT ATGTAACGAT CAATACCTGC TAAAGCAGAC AAAAGCTTTT 
GTTCTGCCGA AGCATCCCAG CGAAATAACT TCCACTGCTG TACCCATGAA GAGTGGTACA 
CGAAGCAATG GCACGACGTC CAGTAGGAGC AAGTATCCGG TGAGTGGACT GTCAACGACA 
CAAATACAGA AACCACTTAG AAAATCTTCA ACAAGCACTC ACAAGCATCC CTCTGAGATA 
AAGAGCAATG CCTACAAGGT CAATGTCTCT TCCACTGGGG TCTCGACTAT TAAAAAGGAC 
TTTACAAGGA CATCTCATTC CTAA