LOC108689883 cDNA ORF clone, Atta colombica

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108689883
Entrez Gene ID	108689883
Full Name	chitinase domain-containing protein 1
Gene Type	protein-coding
Organism	Atta colombica

mRNA and Protein(s)

mRNA	Protein	Name
XM_018196839.1	XP_018052328.1	chitinase domain-containing protein 1

Pathways from BioSystems
Gene Ontology

The following LOC108689883 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108689883 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAt88171	XM_018196839.1 Latest version!	Atta colombica chitinase domain-containing protein 1 (LOC108689883), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108689883 ( XM_018196839.1 ) cDNA ORF clone, Atta colombica -> XP_018052328.1 Atta colombica chitinase domain-containing protein 1 (LOC108689883), mRNA.

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CloneID	OAt88171
Clone ID Related Accession (Same CDS sequence)	XM_018196839.1
Accession Version	XM_018196839.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-18
Organism	Atta colombica
Product	chitinase domain-containing protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017259381.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta colombica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCAAATGT CGTATAAAGA TCCGGTGGAC CAAAATGTTT TCCAAAAAAA CTTGGTAGTG 
GAAAATCCTA AACAACAGGA TATTCTTCAT GAATCTGGTC GATATTTTCA AAATACTAAG 
CACAGAAGAT TTAAGAGAGA TGTCTTAGGA TATTGTACAC CCTGGAACAA AAATGGTTTT 
GAGATTTCAA AAACATTTCA TGGCAAGTTT ACAATAGTAT CTCCTGTATG GTTGGCTTTT 
TCTTTTGGTA ACACTTCAAT CTATCAGTTA TCCACCCATT CTGTTCAGTC TAAATGGATA 
AAGGAAATGA GAGCCAATAA CAATGTTAAT CATATCGTAA AACTTATACC TAGGGTGTTA 
TTTGAACACT GGTCAATTGA TGACATTATT AAGATATACA TTAATACGGA GAGTCAAACT 
CAATTAATAG TATCTCTCTT AGATGCTGCC AAGACTTTTC ACTTCGATGG ATATGTCTTA 
GAAATATGGA ATCAGTTTAT ATTTGCAGGT GCAAATCTAT CAATTGTTAC ATCTATAGTC 
AAATTCATTG CACAAAAATT AAAGAAACAT AATTTAGATA TTATTTTAGC AGTACCACCA 
TCCAGAGGTG CACAAGTTAA ATTATTTTCA AAGCAAGAGT TTGATGAATT AGCGTCATAT 
GTAAACGCCT TTTCGCTTAT GACCTATGAT TATTCGAATA TTCAAAGACC AGGTCCAAAT 
AGTCCTTTCG ATTGGACCAG ACAATGTGTT GAACTTTTAG CTCCAGAGAA AAATAATCAT 
AGACGATCTC AAATTTTATT AGGTATTAAT TTCTATGGTT ACAATTATAC ACCTGAGGGT 
GGCAGGGCAA TTCTCGCCTC TGAATATTTG AATATATTAA AGTCATTTAA AGGAAAAATT 
CAATGGGATA ACAGCAGCAA AGAGCATTTC TTTGAACCGA AATTAGCTAC AGGTAATGGT 
TATGTTTTCT ACCCTACGTT ATATTCAATT AAGGTTCGAT TAGAACTTGC TAATGAATTG 
GGTACAGGAA TTTCGATTTG GGAATTAGGC CAGGGATTGA ATTATTTTTA TGACTTACTA 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018052328.1
CDS	57..1139
Translation	MQMSYKDPVDQNVFQKNLVVENPKQQDILHESGRYFQNTKHRRFKRDVLGYCTPWNKNGFEISKTFHGKFTIVSPVWLAFSFGNTSIYQLSTHSVQSKWIKEMRANNNVNHIVKLIPRVLFEHWSIDDIIKIYINTESQTQLIVSLLDAAKTFHFDGYVLEIWNQFIFAGANLSIVTSIVKFIAQKLKKHNLDIILAVPPSRGAQVKLFSKQEFDELASYVNAFSLMTYDYSNIQRPGPNSPFDWTRQCVELLAPEKNNHRRSQILLGINFYGYNYTPEGGRAILASEYLNILKSFKGKIQWDNSSKEHFFEPKLATGNGYVFYPTLYSIKVRLELANELGTGISIWELGQGLNYFYDLL

Target ORF information:

RefSeq Version	XM_018196839.1
Organism	Atta colombica
Definition	Atta colombica chitinase domain-containing protein 1 (LOC108689883), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018196839.1

ORF Insert Sequence:

ATGCAAATGT CGTATAAAGA TCCGGTGGAC CAAAATGTTT TCCAAAAAAA CTTGGTAGTG 
GAAAATCCTA AACAACAGGA TATTCTTCAT GAATCTGGTC GATATTTTCA AAATACTAAG 
CACAGAAGAT TTAAGAGAGA TGTCTTAGGA TATTGTACAC CCTGGAACAA AAATGGTTTT 
GAGATTTCAA AAACATTTCA TGGCAAGTTT ACAATAGTAT CTCCTGTATG GTTGGCTTTT 
TCTTTTGGTA ACACTTCAAT CTATCAGTTA TCCACCCATT CTGTTCAGTC TAAATGGATA 
AAGGAAATGA GAGCCAATAA CAATGTTAAT CATATCGTAA AACTTATACC TAGGGTGTTA 
TTTGAACACT GGTCAATTGA TGACATTATT AAGATATACA TTAATACGGA GAGTCAAACT 
CAATTAATAG TATCTCTCTT AGATGCTGCC AAGACTTTTC ACTTCGATGG ATATGTCTTA 
GAAATATGGA ATCAGTTTAT ATTTGCAGGT GCAAATCTAT CAATTGTTAC ATCTATAGTC 
AAATTCATTG CACAAAAATT AAAGAAACAT AATTTAGATA TTATTTTAGC AGTACCACCA 
TCCAGAGGTG CACAAGTTAA ATTATTTTCA AAGCAAGAGT TTGATGAATT AGCGTCATAT 
GTAAACGCCT TTTCGCTTAT GACCTATGAT TATTCGAATA TTCAAAGACC AGGTCCAAAT 
AGTCCTTTCG ATTGGACCAG ACAATGTGTT GAACTTTTAG CTCCAGAGAA AAATAATCAT 
AGACGATCTC AAATTTTATT AGGTATTAAT TTCTATGGTT ACAATTATAC ACCTGAGGGT 
GGCAGGGCAA TTCTCGCCTC TGAATATTTG AATATATTAA AGTCATTTAA AGGAAAAATT 
CAATGGGATA ACAGCAGCAA AGAGCATTTC TTTGAACCGA AATTAGCTAC AGGTAATGGT 
TATGTTTTCT ACCCTACGTT ATATTCAATT AAGGTTCGAT TAGAACTTGC TAATGAATTG 
GGTACAGGAA TTTCGATTTG GGAATTAGGC CAGGGATTGA ATTATTTTTA TGACTTACTA 
TAA