LOC107608066 cDNA ORF clone, Arachis ipaensis

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107608066
Entrez Gene ID	107608066
Full Name	pentatricopeptide repeat-containing protein At2g42920, chloroplastic
Gene Type	protein-coding
Organism	Arachis ipaensis

mRNA and Protein(s)

mRNA	Protein	Name
XM_016309956.1	XP_016165442.1	pentatricopeptide repeat-containing protein At2g42920, chloroplastic
XM_016309956.2	XP_016165442.1	pentatricopeptide repeat-containing protein At2g42920, chloroplastic

Pathways from BioSystems
Gene Ontology

The following LOC107608066 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107608066 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OAr72363	XM_016309956.2 Latest version!	Arachis ipaensis pentatricopeptide repeat-containing protein At2g42920, chloroplastic (LOC107608066), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00
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OAr72363	XM_016309956.1	Arachis ipaensis pentatricopeptide repeat-containing protein At2g42920, chloroplastic (LOC107608066), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107608066 ( XM_016309956.1 ) cDNA ORF clone, Arachis ipaensis -> XP_016165442.1 Arachis ipaensis pentatricopeptide repeat-containing protein At2g42920, chloroplastic (LOC107608066), mRNA.

Price & Availability↑

CloneID	OAr72363
Clone ID Related Accession (Same CDS sequence)	XM_016309956.1 , XM_016309956.2
Accession Version	XM_016309956.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1608bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-04-21
Organism	Arachis ipaensis
Product	pentatricopeptide repeat-containing protein At2g42920, chloroplastic
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029791.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Arachis ipaensis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAAGTG TTTGTTATTC TGTACTTGCT CCATCATCAT CACCCTCCAT ATCCAAGTTC 
ATCTCTGACC ATCCATGCCT AACCATGCTC CAAAACCACT GTTCCACCAT GAAAGACCTC 
AAAAAGCTCC ATGCTCACAT GATCAAAACT GGTCTTGTTC TTGACCCCAT TGCTGCCAGC 
AAAGTCCTCA CCTTTTGTGC TTCCCCACAT GGTGACACCA ACTATGCACA CATGGTGTTC 
ACCAGAATGC CTAAACCAAC TCTCTATTCT TGGAACACCA TCATAAGGTG CTTCTCTAGA 
AGCTCAACCC CACAACTTGC TTTATCAATT TTTATTGACA TGTTGTGTTC TGATGATGAT 
TATGTTCAGC CGCAAAGGTT GACTTATCCT TCTGTTTTCA AGGCTTTTGC TCAACTTGGT 
GATGTCCATG GTGGTGCTCA GCTTCATGGG AGGGTTGTGA AATTGGGTCT TGAAGATGAT 
GAGTTCATTT GTAATACTAT CATATATATG TATGCTAATA GTGGCTTGTT GAGAGAGGCT 
AGAAGAGTGT TTGATAAGAA AGTTGAACTT GATGTTGTTG CTTGGAACTC AATGATTATG 
GGGCTTGCAA AATATGGGGA AATTGATGAG TCTAGGAGGA TGTTTGATGC AATGCCTGAA 
AGAACCCCAG TTACTTGGAA TTCCATGATC AGTGGTTATG TTAGGAATGG GAAGCTTATG 
GAGGCGTTGG AGCTTTTTCG CGAGATGCAA GAAGAAGATG TTGAGACCAG TGAATTCACA 
ATGGTGAGCT TGTTGAATGC TTGTGCTCAC TTAGGAGCTC TTGAACATGG AAAATGGGTT 
CATAATTACA TAAAAAAGAG TGGTTTCGAG TTTAATCTTA TTGTCACTAC GGCAATAATT 
GACATGTATT GCAAGTGTGG ATCTATTGAA AATGCTATTG AAGTGTTTGA TGCATCATCC 
ACAAGAGGGT TATCAAGCTG GAACTCAATT ATAATAGGCT TAGCCATGAA TGGACACGAG 
AGAGAAGCAA TTCAGTACTT CTCTAAGCTT AAATGTTCAA GTCTAAAGCC AGATAGTGTC 
AGTTTCATTG GTGTTCTAAC TGCTTGTAAA TATTTAGGAG CAATTGATAG AGCAAAGGAC 
TACTTTGCAC AAATGATGAA TGAGTATGAG ATTGAACCTT CAATAAAACA CTACACTTGC 
ATGGTTGAAG TGTTAGGCCA AGCGGCATTG CTAGAAGAGG CAGAAGAACT GATAAGAGAT 
ATGCCTATAG AACCAGATGC TATTATCTGG GGATCTCTGC TCTCATCTTG TGCGAAGCAT 
GGGAATGTAG AGATGGCGAA ACGGGCTGCA GAAAGAGTTT GCAAGTTGAA TCCGAGTGAT 
GCAAGTGGTT ATGTACTTAT GTCTAATGTT CAGGCTGCGT CAAAACAGTT TGAAGAGGCA 
ATTGAGCACA GGCTTTTGAT GAAGAGGTTG ACCGAGAAAG AACCAGGTTG TAGTTCAATT 
GAACTAGATG GAGAAGTTCA TGAATTTCTA GCTGGAGGGA GGTTGCATCC TAAAACTCAA 
GAAATTTACT ACTTACTTAA TGACTCAAGT TTTACACCTG AAGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016165442.1
CDS	144..1751
Translation	MASVCYSVLAPSSSPSISKFISDHPCLTMLQNHCSTMKDLKKLHAHMIKTGLVLDPIAASKVLTFCASPHGDTNYAHMVFTRMPKPTLYSWNTIIRCFSRSSTPQLALSIFIDMLCSDDDYVQPQRLTYPSVFKAFAQLGDVHGGAQLHGRVVKLGLEDDEFICNTIIYMYANSGLLREARRVFDKKVELDVVAWNSMIMGLAKYGEIDESRRMFDAMPERTPVTWNSMISGYVRNGKLMEALELFREMQEEDVETSEFTMVSLLNACAHLGALEHGKWVHNYIKKSGFEFNLIVTTAIIDMYCKCGSIENAIEVFDASSTRGLSSWNSIIIGLAMNGHEREAIQYFSKLKCSSLKPDSVSFIGVLTACKYLGAIDRAKDYFAQMMNEYEIEPSIKHYTCMVEVLGQAALLEEAEELIRDMPIEPDAIIWGSLLSSCAKHGNVEMAKRAAERVCKLNPSDASGYVLMSNVQAASKQFEEAIEHRLLMKRLTEKEPGCSSIELDGEVHEFLAGGRLHPKTQEIYYLLNDSSFTPED

Target ORF information:

RefSeq Version	XM_016309956.1
Organism	Arachis ipaensis
Definition	Arachis ipaensis pentatricopeptide repeat-containing protein At2g42920, chloroplastic (LOC107608066), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016309956.1

ORF Insert Sequence:

ATGGCAAGTG TTTGTTATTC TGTACTTGCT CCATCATCAT CACCCTCCAT ATCCAAGTTC 
ATCTCTGACC ATCCATGCCT AACCATGCTC CAAAACCACT GTTCCACCAT GAAAGACCTC 
AAAAAGCTCC ATGCTCACAT GATCAAAACT GGTCTTGTTC TTGACCCCAT TGCTGCCAGC 
AAAGTCCTCA CCTTTTGTGC TTCCCCACAT GGTGACACCA ACTATGCACA CATGGTGTTC 
ACCAGAATGC CTAAACCAAC TCTCTATTCT TGGAACACCA TCATAAGGTG CTTCTCTAGA 
AGCTCAACCC CACAACTTGC TTTATCAATT TTTATTGACA TGTTGTGTTC TGATGATGAT 
TATGTTCAGC CGCAAAGGTT GACTTATCCT TCTGTTTTCA AGGCTTTTGC TCAACTTGGT 
GATGTCCATG GTGGTGCTCA GCTTCATGGG AGGGTTGTGA AATTGGGTCT TGAAGATGAT 
GAGTTCATTT GTAATACTAT CATATATATG TATGCTAATA GTGGCTTGTT GAGAGAGGCT 
AGAAGAGTGT TTGATAAGAA AGTTGAACTT GATGTTGTTG CTTGGAACTC AATGATTATG 
GGGCTTGCAA AATATGGGGA AATTGATGAG TCTAGGAGGA TGTTTGATGC AATGCCTGAA 
AGAACCCCAG TTACTTGGAA TTCCATGATC AGTGGTTATG TTAGGAATGG GAAGCTTATG 
GAGGCGTTGG AGCTTTTTCG CGAGATGCAA GAAGAAGATG TTGAGACCAG TGAATTCACA 
ATGGTGAGCT TGTTGAATGC TTGTGCTCAC TTAGGAGCTC TTGAACATGG AAAATGGGTT 
CATAATTACA TAAAAAAGAG TGGTTTCGAG TTTAATCTTA TTGTCACTAC GGCAATAATT 
GACATGTATT GCAAGTGTGG ATCTATTGAA AATGCTATTG AAGTGTTTGA TGCATCATCC 
ACAAGAGGGT TATCAAGCTG GAACTCAATT ATAATAGGCT TAGCCATGAA TGGACACGAG 
AGAGAAGCAA TTCAGTACTT CTCTAAGCTT AAATGTTCAA GTCTAAAGCC AGATAGTGTC 
AGTTTCATTG GTGTTCTAAC TGCTTGTAAA TATTTAGGAG CAATTGATAG AGCAAAGGAC 
TACTTTGCAC AAATGATGAA TGAGTATGAG ATTGAACCTT CAATAAAACA CTACACTTGC 
ATGGTTGAAG TGTTAGGCCA AGCGGCATTG CTAGAAGAGG CAGAAGAACT GATAAGAGAT 
ATGCCTATAG AACCAGATGC TATTATCTGG GGATCTCTGC TCTCATCTTG TGCGAAGCAT 
GGGAATGTAG AGATGGCGAA ACGGGCTGCA GAAAGAGTTT GCAAGTTGAA TCCGAGTGAT 
GCAAGTGGTT ATGTACTTAT GTCTAATGTT CAGGCTGCGT CAAAACAGTT TGAAGAGGCA 
ATTGAGCACA GGCTTTTGAT GAAGAGGTTG ACCGAGAAAG AACCAGGTTG TAGTTCAATT 
GAACTAGATG GAGAAGTTCA TGAATTTCTA GCTGGAGGGA GGTTGCATCC TAAAACTCAA 
GAAATTTACT ACTTACTTAA TGACTCAAGT TTTACACCTG AAGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC107608066 ( XM_016309956.2 ) cDNA ORF clone, Arachis ipaensis -> XP_016165442.1 Arachis ipaensis pentatricopeptide repeat-containing protein At2g42920, chloroplastic (LOC107608066), mRNA.

Price & Availability↑

CloneID	OAr72363
Clone ID Related Accession (Same CDS sequence)	XM_016309956.1 , XM_016309956.2
Accession Version	XM_016309956.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1608bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-05-12
Organism	Arachis ipaensis
Product	pentatricopeptide repeat-containing protein At2g42920, chloroplastic
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029791.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_016309956.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Arachis ipaensis Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAAGTG TTTGTTATTC TGTACTTGCT CCATCATCAT CACCCTCCAT ATCCAAGTTC 
ATCTCTGACC ATCCATGCCT AACCATGCTC CAAAACCACT GTTCCACCAT GAAAGACCTC 
AAAAAGCTCC ATGCTCACAT GATCAAAACT GGTCTTGTTC TTGACCCCAT TGCTGCCAGC 
AAAGTCCTCA CCTTTTGTGC TTCCCCACAT GGTGACACCA ACTATGCACA CATGGTGTTC 
ACCAGAATGC CTAAACCAAC TCTCTATTCT TGGAACACCA TCATAAGGTG CTTCTCTAGA 
AGCTCAACCC CACAACTTGC TTTATCAATT TTTATTGACA TGTTGTGTTC TGATGATGAT 
TATGTTCAGC CGCAAAGGTT GACTTATCCT TCTGTTTTCA AGGCTTTTGC TCAACTTGGT 
GATGTCCATG GTGGTGCTCA GCTTCATGGG AGGGTTGTGA AATTGGGTCT TGAAGATGAT 
GAGTTCATTT GTAATACTAT CATATATATG TATGCTAATA GTGGCTTGTT GAGAGAGGCT 
AGAAGAGTGT TTGATAAGAA AGTTGAACTT GATGTTGTTG CTTGGAACTC AATGATTATG 
GGGCTTGCAA AATATGGGGA AATTGATGAG TCTAGGAGGA TGTTTGATGC AATGCCTGAA 
AGAACCCCAG TTACTTGGAA TTCCATGATC AGTGGTTATG TTAGGAATGG GAAGCTTATG 
GAGGCGTTGG AGCTTTTTCG CGAGATGCAA GAAGAAGATG TTGAGACCAG TGAATTCACA 
ATGGTGAGCT TGTTGAATGC TTGTGCTCAC TTAGGAGCTC TTGAACATGG AAAATGGGTT 
CATAATTACA TAAAAAAGAG TGGTTTCGAG TTTAATCTTA TTGTCACTAC GGCAATAATT 
GACATGTATT GCAAGTGTGG ATCTATTGAA AATGCTATTG AAGTGTTTGA TGCATCATCC 
ACAAGAGGGT TATCAAGCTG GAACTCAATT ATAATAGGCT TAGCCATGAA TGGACACGAG 
AGAGAAGCAA TTCAGTACTT CTCTAAGCTT AAATGTTCAA GTCTAAAGCC AGATAGTGTC 
AGTTTCATTG GTGTTCTAAC TGCTTGTAAA TATTTAGGAG CAATTGATAG AGCAAAGGAC 
TACTTTGCAC AAATGATGAA TGAGTATGAG ATTGAACCTT CAATAAAACA CTACACTTGC 
ATGGTTGAAG TGTTAGGCCA AGCGGCATTG CTAGAAGAGG CAGAAGAACT GATAAGAGAT 
ATGCCTATAG AACCAGATGC TATTATCTGG GGATCTCTGC TCTCATCTTG TGCGAAGCAT 
GGGAATGTAG AGATGGCGAA ACGGGCTGCA GAAAGAGTTT GCAAGTTGAA TCCGAGTGAT 
GCAAGTGGTT ATGTACTTAT GTCTAATGTT CAGGCTGCGT CAAAACAGTT TGAAGAGGCA 
ATTGAGCACA GGCTTTTGAT GAAGAGGTTG ACCGAGAAAG AACCAGGTTG TAGTTCAATT 
GAACTAGATG GAGAAGTTCA TGAATTTCTA GCTGGAGGGA GGTTGCATCC TAAAACTCAA 
GAAATTTACT ACTTACTTAA TGACTCAAGT TTTACACCTG AAGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016165442.1
CDS	165..1772
Translation	MASVCYSVLAPSSSPSISKFISDHPCLTMLQNHCSTMKDLKKLHAHMIKTGLVLDPIAASKVLTFCASPHGDTNYAHMVFTRMPKPTLYSWNTIIRCFSRSSTPQLALSIFIDMLCSDDDYVQPQRLTYPSVFKAFAQLGDVHGGAQLHGRVVKLGLEDDEFICNTIIYMYANSGLLREARRVFDKKVELDVVAWNSMIMGLAKYGEIDESRRMFDAMPERTPVTWNSMISGYVRNGKLMEALELFREMQEEDVETSEFTMVSLLNACAHLGALEHGKWVHNYIKKSGFEFNLIVTTAIIDMYCKCGSIENAIEVFDASSTRGLSSWNSIIIGLAMNGHEREAIQYFSKLKCSSLKPDSVSFIGVLTACKYLGAIDRAKDYFAQMMNEYEIEPSIKHYTCMVEVLGQAALLEEAEELIRDMPIEPDAIIWGSLLSSCAKHGNVEMAKRAAERVCKLNPSDASGYVLMSNVQAASKQFEEAIEHRLLMKRLTEKEPGCSSIELDGEVHEFLAGGRLHPKTQEIYYLLNDSSFTPED

Target ORF information:

RefSeq Version	XM_016309956.2
Organism	Arachis ipaensis
Definition	Arachis ipaensis pentatricopeptide repeat-containing protein At2g42920, chloroplastic (LOC107608066), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016309956.2

ORF Insert Sequence:

ATGGCAAGTG TTTGTTATTC TGTACTTGCT CCATCATCAT CACCCTCCAT ATCCAAGTTC 
ATCTCTGACC ATCCATGCCT AACCATGCTC CAAAACCACT GTTCCACCAT GAAAGACCTC 
AAAAAGCTCC ATGCTCACAT GATCAAAACT GGTCTTGTTC TTGACCCCAT TGCTGCCAGC 
AAAGTCCTCA CCTTTTGTGC TTCCCCACAT GGTGACACCA ACTATGCACA CATGGTGTTC 
ACCAGAATGC CTAAACCAAC TCTCTATTCT TGGAACACCA TCATAAGGTG CTTCTCTAGA 
AGCTCAACCC CACAACTTGC TTTATCAATT TTTATTGACA TGTTGTGTTC TGATGATGAT 
TATGTTCAGC CGCAAAGGTT GACTTATCCT TCTGTTTTCA AGGCTTTTGC TCAACTTGGT 
GATGTCCATG GTGGTGCTCA GCTTCATGGG AGGGTTGTGA AATTGGGTCT TGAAGATGAT 
GAGTTCATTT GTAATACTAT CATATATATG TATGCTAATA GTGGCTTGTT GAGAGAGGCT 
AGAAGAGTGT TTGATAAGAA AGTTGAACTT GATGTTGTTG CTTGGAACTC AATGATTATG 
GGGCTTGCAA AATATGGGGA AATTGATGAG TCTAGGAGGA TGTTTGATGC AATGCCTGAA 
AGAACCCCAG TTACTTGGAA TTCCATGATC AGTGGTTATG TTAGGAATGG GAAGCTTATG 
GAGGCGTTGG AGCTTTTTCG CGAGATGCAA GAAGAAGATG TTGAGACCAG TGAATTCACA 
ATGGTGAGCT TGTTGAATGC TTGTGCTCAC TTAGGAGCTC TTGAACATGG AAAATGGGTT 
CATAATTACA TAAAAAAGAG TGGTTTCGAG TTTAATCTTA TTGTCACTAC GGCAATAATT 
GACATGTATT GCAAGTGTGG ATCTATTGAA AATGCTATTG AAGTGTTTGA TGCATCATCC 
ACAAGAGGGT TATCAAGCTG GAACTCAATT ATAATAGGCT TAGCCATGAA TGGACACGAG 
AGAGAAGCAA TTCAGTACTT CTCTAAGCTT AAATGTTCAA GTCTAAAGCC AGATAGTGTC 
AGTTTCATTG GTGTTCTAAC TGCTTGTAAA TATTTAGGAG CAATTGATAG AGCAAAGGAC 
TACTTTGCAC AAATGATGAA TGAGTATGAG ATTGAACCTT CAATAAAACA CTACACTTGC 
ATGGTTGAAG TGTTAGGCCA AGCGGCATTG CTAGAAGAGG CAGAAGAACT GATAAGAGAT 
ATGCCTATAG AACCAGATGC TATTATCTGG GGATCTCTGC TCTCATCTTG TGCGAAGCAT 
GGGAATGTAG AGATGGCGAA ACGGGCTGCA GAAAGAGTTT GCAAGTTGAA TCCGAGTGAT 
GCAAGTGGTT ATGTACTTAT GTCTAATGTT CAGGCTGCGT CAAAACAGTT TGAAGAGGCA 
ATTGAGCACA GGCTTTTGAT GAAGAGGTTG ACCGAGAAAG AACCAGGTTG TAGTTCAATT 
GAACTAGATG GAGAAGTTCA TGAATTTCTA GCTGGAGGGA GGTTGCATCC TAAAACTCAA 
GAAATTTACT ACTTACTTAA TGACTCAAGT TTTACACCTG AAGATTGA