IRF5 cDNA ORF clone, Alligator mississippiensis(American alligator)

Gene
Clones
gRNAs

Summary

Gene Symbol	IRF5
Entrez Gene ID	102561832
Full Name	interferon regulatory factor 5
Gene Type	protein-coding
Organism	Alligator mississippiensis(American alligator)

mRNA and Protein(s)

mRNA	Protein	Name
XM_006261131.3	XP_006261193.2	interferon regulatory factor 5 isoform X2
XM_019493561.1	XP_019349106.1	interferon regulatory factor 5 isoform X1

Pathways from BioSystems
Gene Ontology

The following IRF5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IRF5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAl63913	XM_019493561.1 Latest version!	Alligator mississippiensis interferon regulatory factor 5 (IRF5), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00
OAl63914	XM_006261131.3 Latest version!	Alligator mississippiensis interferon regulatory factor 5 (IRF5), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

IRF5 ( XM_019493561.1 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_019349106.1 Alligator mississippiensis interferon regulatory factor 5 (IRF5), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OAl63913
Clone ID Related Accession (Same CDS sequence)	XM_019493561.1
Accession Version	XM_019493561.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1581bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon regulatory factor 5 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017711426.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGGGGG GACCTCCGTA CAGAACCAAG TTTCAATTTC ATCTGTGTCA CGCTGAGCCG 
TCAGTCGGAC CCGTCCGGGC TCCCGATGCA CCGCGGCTGC CCTCCTTCCT CTCATCATTC 
AGAGATCGGC GAGCTCCCAT CTGGCTGGAG GCCGTGAGTC GCCATGAACC CGCACCCTCG 
CCGCGTCCGC CTGAAGCCCT GGCTGGTCGC CCAAGTGAAC AGCAACCAGT ACCCGGGGCT 
GCAGTGGGTG AACGCCGAGC GCAAGCTGTT CTGCATCCCC TGGCGCCACG CCACGCGGCA 
CATCCCCACA CAGGAGGACG AGAACACCAT CTTCAAGGCT TGGGCCAAGG AGACGGGCAA 
GTACACCGAA GGGGTGGACG AGCCGGACCC GGCCAAGTGG AAGGCCAACC TGCGCTGCGC 
CCTCAACAAG AGCCGGGAGT TCAACCTGAT CTACGATGGC ACCAAGGACA CCCCCATGCA 
GCCCTACAAG ATCTACGAGA CTCCTTAGCG AGAGATGAGG ACGAGGACGA GGAGCTGCAG 
AAGATGACAG CGCTGACGAT AGCGGACTCC AGCCAGGCCC TGGAGCCGCT GGCCCCGTAC 
TCGTGGCCAA AGCAGGAAGT CCAGTTCCCC GACGCCCACA GCACCTGCGT CTTCCCCCCG 
CTGAGGGCCC CGGAGGTCTC GGACCCCGCC GGCCCCTTCG TCCCGGAGCT GCCCCCGCCC 
GAGTCCGCCG GCGCCATCGT GTGCCCAGGG AGCCTGGAGA ACTTGCCCCC CGGGAACGAG 
CCGCTGCAGC CCATGGAACA GTTCATCCCC GACCTGCTCA TCAGCCCGCA CATGCTGCCA 
TTGACAGACC TGGAGATCAA GTTCCAGTAC CGGGGCCGGC CGGTGTGGTC CCTGACCATC 
AGCAACCCGC ACGGCTGCCG CCTCTTCTAC AGCAACCTGG AGCCCACGCA GGAGCAGGTG 
GAGCTGTTCG GGCCGGTGAC GCTGGAGCAG GTGCGTTTCC CCAACACCGA CCACATCCCC 
AACGAGAAGC AGCGCTTCTA CACCCACCAG CTGCTGGATG TCCTGGACCG GGGCCTCATC 
CTGGAGCTGC AGGGCCAGGA CATCTACGCC ATCCGGCTCT GCCAGTGCAA GGTGTTCTGG 
ACGGGGCCCT GCGCCGCCGA GGGCACCGGC CCCAACCCCA TCGAGCGTGA GAAGAAGATC 
AAGCTCTTCA GCCTGGAGAA CTTCCTCAAC GGCCTCATCC TGTTCCAGAA GGGGCAGACG 
CCCACGCCGC CCCCCTTCGA AATCTTCTTC TGCTTCGGCG AGGAGTGGCC CGACCAGAAG 
CCCAAGGAGA AGAAGCTCAT CACTGTCCAG GTGGTGCCAG TGGCCGCGCG GCTCCTGCTG 
GAGATGTTTT CCGGGGAGCT GTCTTGGTCG GCAGACAGCA TCCGCCTGCA GATCTCGCAC 
CCGGACCTCA AGGACAAGAT GGTGGAGCAG TTCAAGGAGC TGCACCAGAT CTGGCAGAAT 
CAGCAGGGCC TGCAGGGGCC CCCGGCAGCC CACGCCGGGC CCAGCCTGGA GCCGGGCGCG 
GGCGTGTGGC CCATGCAGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019349106.1
CDS	402..1982
Translation	MEGGPPYRTKFQFHLCHAEPSVGPVRAPDAPRLPSFLSSFRDRRAPIWLEAVSRHEPAPSPRPPEALAGRPSEQQPVPGAAVGERRAQAVLHPLAPRHAAHPHTGGREHHLQGLGQGDGQVHRRGGRAGPGQVEGQPALRPQQEPGVQPDLRWHQGHPHAALQDLRDSLARDEDEDEELQKMTALTIADSSQALEPLAPYSWPKQEVQFPDAHSTCVFPPLRAPEVSDPAGPFVPELPPPESAGAIVCPGSLENLPPGNEPLQPMEQFIPDLLISPHMLPLTDLEIKFQYRGRPVWSLTISNPHGCRLFYSNLEPTQEQVELFGPVTLEQVRFPNTDHIPNEKQRFYTHQLLDVLDRGLILELQGQDIYAIRLCQCKVFWTGPCAAEGTGPNPIEREKKIKLFSLENFLNGLILFQKGQTPTPPPFEIFFCFGEEWPDQKPKEKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISHPDLKDKMVEQFKELHQIWQNQQGLQGPPAAHAGPSLEPGAGVWPMQ

Target ORF information:

RefSeq Version	XM_019493561.1
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon regulatory factor 5 (IRF5), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019493561.1

ORF Insert Sequence:

ATGGAGGGGG GACCTCCGTA CAGAACCAAG TTTCAATTTC ATCTGTGTCA CGCTGAGCCG 
TCAGTCGGAC CCGTCCGGGC TCCCGATGCA CCGCGGCTGC CCTCCTTCCT CTCATCATTC 
AGAGATCGGC GAGCTCCCAT CTGGCTGGAG GCCGTGAGTC GCCATGAACC CGCACCCTCG 
CCGCGTCCGC CTGAAGCCCT GGCTGGTCGC CCAAGTGAAC AGCAACCAGT ACCCGGGGCT 
GCAGTGGGTG AACGCCGAGC GCAAGCTGTT CTGCATCCCC TGGCGCCACG CCACGCGGCA 
CATCCCCACA CAGGAGGACG AGAACACCAT CTTCAAGGCT TGGGCCAAGG AGACGGGCAA 
GTACACCGAA GGGGTGGACG AGCCGGACCC GGCCAAGTGG AAGGCCAACC TGCGCTGCGC 
CCTCAACAAG AGCCGGGAGT TCAACCTGAT CTACGATGGC ACCAAGGACA CCCCCATGCA 
GCCCTACAAG ATCTACGAGA CTCCTTAGCG AGAGATGAGG ACGAGGACGA GGAGCTGCAG 
AAGATGACAG CGCTGACGAT AGCGGACTCC AGCCAGGCCC TGGAGCCGCT GGCCCCGTAC 
TCGTGGCCAA AGCAGGAAGT CCAGTTCCCC GACGCCCACA GCACCTGCGT CTTCCCCCCG 
CTGAGGGCCC CGGAGGTCTC GGACCCCGCC GGCCCCTTCG TCCCGGAGCT GCCCCCGCCC 
GAGTCCGCCG GCGCCATCGT GTGCCCAGGG AGCCTGGAGA ACTTGCCCCC CGGGAACGAG 
CCGCTGCAGC CCATGGAACA GTTCATCCCC GACCTGCTCA TCAGCCCGCA CATGCTGCCA 
TTGACAGACC TGGAGATCAA GTTCCAGTAC CGGGGCCGGC CGGTGTGGTC CCTGACCATC 
AGCAACCCGC ACGGCTGCCG CCTCTTCTAC AGCAACCTGG AGCCCACGCA GGAGCAGGTG 
GAGCTGTTCG GGCCGGTGAC GCTGGAGCAG GTGCGTTTCC CCAACACCGA CCACATCCCC 
AACGAGAAGC AGCGCTTCTA CACCCACCAG CTGCTGGATG TCCTGGACCG GGGCCTCATC 
CTGGAGCTGC AGGGCCAGGA CATCTACGCC ATCCGGCTCT GCCAGTGCAA GGTGTTCTGG 
ACGGGGCCCT GCGCCGCCGA GGGCACCGGC CCCAACCCCA TCGAGCGTGA GAAGAAGATC 
AAGCTCTTCA GCCTGGAGAA CTTCCTCAAC GGCCTCATCC TGTTCCAGAA GGGGCAGACG 
CCCACGCCGC CCCCCTTCGA AATCTTCTTC TGCTTCGGCG AGGAGTGGCC CGACCAGAAG 
CCCAAGGAGA AGAAGCTCAT CACTGTCCAG GTGGTGCCAG TGGCCGCGCG GCTCCTGCTG 
GAGATGTTTT CCGGGGAGCT GTCTTGGTCG GCAGACAGCA TCCGCCTGCA GATCTCGCAC 
CCGGACCTCA AGGACAAGAT GGTGGAGCAG TTCAAGGAGC TGCACCAGAT CTGGCAGAAT 
CAGCAGGGCC TGCAGGGGCC CCCGGCAGCC CACGCCGGGC CCAGCCTGGA GCCGGGCGCG 
GGCGTGTGGC CCATGCAGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

IRF5 ( XM_006261131.3 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_006261193.2 Alligator mississippiensis interferon regulatory factor 5 (IRF5), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OAl63914
Clone ID Related Accession (Same CDS sequence)	XM_006261131.3
Accession Version	XM_006261131.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1446bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon regulatory factor 5 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017711426.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2016 this sequence version replaced XM_006261131.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACCCGC ACCCTCGCCG CGTCCGCCTG AAGCCCTGGC TGGTCGCCCA AGTGAACAGC 
AACCAGTACC CGGGGCTGCA GTGGGTGAAC GCCGAGCGCA AGCTGTTCTG CATCCCCTGG 
CGCCACGCCA CGCGGCACAT CCCCACACAG GAGGACGAGA ACACCATCTT CAAGGCTTGG 
GCCAAGGAGA CGGGCAAGTA CACCGAAGGG GTGGACGAGC CGGACCCGGC CAAGTGGAAG 
GCCAACCTGC GCTGCGCCCT CAACAAGAGC CGGGAGTTCA ACCTGATCTA CGATGGCACC 
AAGGACACCC CCATGCAGCC CTACAAGATC TACGAGGTGT GCGAGCTGCA GCAGCCCAAC 
GGAGACTCCT TAGCGAGAGA TGAGGACGAG GACGAGGAGC TGCAGAAGAT GACAGCGCTG 
ACGATAGCGG ACTCCAGCCA GGCCCTGGAG CCGCTGGCCC CGTACTCGTG GCCAAAGCAG 
GAAGTCCAGT TCCCCGACGC CCACAGCACC TGCGTCTTCC CCCCGCTGAG GGCCCCGGAG 
GTCTCGGACC CCGCCGGCCC CTTCGTCCCG GAGCTGCCCC CGCCCGAGTC CGCCGGCGCC 
ATCGTGTGCC CAGGGAGCCT GGAGAACTTG CCCCCCGGGA ACGAGCCGCT GCAGCCCATG 
GAACAGTTCA TCCCCGACCT GCTCATCAGC CCGCACATGC TGCCATTGAC AGACCTGGAG 
ATCAAGTTCC AGTACCGGGG CCGGCCGGTG TGGTCCCTGA CCATCAGCAA CCCGCACGGC 
TGCCGCCTCT TCTACAGCAA CCTGGAGCCC ACGCAGGAGC AGGTGGAGCT GTTCGGGCCG 
GTGACGCTGG AGCAGGTGCG TTTCCCCAAC ACCGACCACA TCCCCAACGA GAAGCAGCGC 
TTCTACACCC ACCAGCTGCT GGATGTCCTG GACCGGGGCC TCATCCTGGA GCTGCAGGGC 
CAGGACATCT ACGCCATCCG GCTCTGCCAG TGCAAGGTGT TCTGGACGGG GCCCTGCGCC 
GCCGAGGGCA CCGGCCCCAA CCCCATCGAG CGTGAGAAGA AGATCAAGCT CTTCAGCCTG 
GAGAACTTCC TCAACGGCCT CATCCTGTTC CAGAAGGGGC AGACGCCCAC GCCGCCCCCC 
TTCGAAATCT TCTTCTGCTT CGGCGAGGAG TGGCCCGACC AGAAGCCCAA GGAGAAGAAG 
CTCATCACTG TCCAGGTGGT GCCAGTGGCC GCGCGGCTCC TGCTGGAGAT GTTTTCCGGG 
GAGCTGTCTT GGTCGGCAGA CAGCATCCGC CTGCAGATCT CGCACCCGGA CCTCAAGGAC 
AAGATGGTGG AGCAGTTCAA GGAGCTGCAC CAGATCTGGC AGAATCAGCA GGGCCTGCAG 
GGGCCCCCGG CAGCCCACGC CGGGCCCAGC CTGGAGCCGG GCGCGGGCGT GTGGCCCATG 
CAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006261193.2
CDS	128..1573
Translation	MNPHPRRVRLKPWLVAQVNSNQYPGLQWVNAERKLFCIPWRHATRHIPTQEDENTIFKAWAKETGKYTEGVDEPDPAKWKANLRCALNKSREFNLIYDGTKDTPMQPYKIYEVCELQQPNGDSLARDEDEDEELQKMTALTIADSSQALEPLAPYSWPKQEVQFPDAHSTCVFPPLRAPEVSDPAGPFVPELPPPESAGAIVCPGSLENLPPGNEPLQPMEQFIPDLLISPHMLPLTDLEIKFQYRGRPVWSLTISNPHGCRLFYSNLEPTQEQVELFGPVTLEQVRFPNTDHIPNEKQRFYTHQLLDVLDRGLILELQGQDIYAIRLCQCKVFWTGPCAAEGTGPNPIEREKKIKLFSLENFLNGLILFQKGQTPTPPPFEIFFCFGEEWPDQKPKEKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISHPDLKDKMVEQFKELHQIWQNQQGLQGPPAAHAGPSLEPGAGVWPMQ

Target ORF information:

RefSeq Version	XM_006261131.3
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon regulatory factor 5 (IRF5), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006261131.3

ORF Insert Sequence:

ATGAACCCGC ACCCTCGCCG CGTCCGCCTG AAGCCCTGGC TGGTCGCCCA AGTGAACAGC 
AACCAGTACC CGGGGCTGCA GTGGGTGAAC GCCGAGCGCA AGCTGTTCTG CATCCCCTGG 
CGCCACGCCA CGCGGCACAT CCCCACACAG GAGGACGAGA ACACCATCTT CAAGGCTTGG 
GCCAAGGAGA CGGGCAAGTA CACCGAAGGG GTGGACGAGC CGGACCCGGC CAAGTGGAAG 
GCCAACCTGC GCTGCGCCCT CAACAAGAGC CGGGAGTTCA ACCTGATCTA CGATGGCACC 
AAGGACACCC CCATGCAGCC CTACAAGATC TACGAGGTGT GCGAGCTGCA GCAGCCCAAC 
GGAGACTCCT TAGCGAGAGA TGAGGACGAG GACGAGGAGC TGCAGAAGAT GACAGCGCTG 
ACGATAGCGG ACTCCAGCCA GGCCCTGGAG CCGCTGGCCC CGTACTCGTG GCCAAAGCAG 
GAAGTCCAGT TCCCCGACGC CCACAGCACC TGCGTCTTCC CCCCGCTGAG GGCCCCGGAG 
GTCTCGGACC CCGCCGGCCC CTTCGTCCCG GAGCTGCCCC CGCCCGAGTC CGCCGGCGCC 
ATCGTGTGCC CAGGGAGCCT GGAGAACTTG CCCCCCGGGA ACGAGCCGCT GCAGCCCATG 
GAACAGTTCA TCCCCGACCT GCTCATCAGC CCGCACATGC TGCCATTGAC AGACCTGGAG 
ATCAAGTTCC AGTACCGGGG CCGGCCGGTG TGGTCCCTGA CCATCAGCAA CCCGCACGGC 
TGCCGCCTCT TCTACAGCAA CCTGGAGCCC ACGCAGGAGC AGGTGGAGCT GTTCGGGCCG 
GTGACGCTGG AGCAGGTGCG TTTCCCCAAC ACCGACCACA TCCCCAACGA GAAGCAGCGC 
TTCTACACCC ACCAGCTGCT GGATGTCCTG GACCGGGGCC TCATCCTGGA GCTGCAGGGC 
CAGGACATCT ACGCCATCCG GCTCTGCCAG TGCAAGGTGT TCTGGACGGG GCCCTGCGCC 
GCCGAGGGCA CCGGCCCCAA CCCCATCGAG CGTGAGAAGA AGATCAAGCT CTTCAGCCTG 
GAGAACTTCC TCAACGGCCT CATCCTGTTC CAGAAGGGGC AGACGCCCAC GCCGCCCCCC 
TTCGAAATCT TCTTCTGCTT CGGCGAGGAG TGGCCCGACC AGAAGCCCAA GGAGAAGAAG 
CTCATCACTG TCCAGGTGGT GCCAGTGGCC GCGCGGCTCC TGCTGGAGAT GTTTTCCGGG 
GAGCTGTCTT GGTCGGCAGA CAGCATCCGC CTGCAGATCT CGCACCCGGA CCTCAAGGAC 
AAGATGGTGG AGCAGTTCAA GGAGCTGCAC CAGATCTGGC AGAATCAGCA GGGCCTGCAG 
GGGCCCCCGG CAGCCCACGC CGGGCCCAGC CTGGAGCCGG GCGCGGGCGT GTGGCCCATG 
CAGTAG