cirbp cDNA ORF clone, Oncorhynchus mykiss(rainbow trout)

Gene
Clones
gRNAs

Summary

Gene Symbol	cirbp
Entrez Gene ID	100305215
Full Name	cold inducible RNA binding protein
Gene Type	protein-coding
Organism	Oncorhynchus mykiss(rainbow trout)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001165119.1	NP_001158591.1	cold inducible RNA binding protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates.
Berthelot C, Brunet F, Chalopin D, Juanchich A, Bernard M, No?l B, Bento P, Da Silva C, Labadie K, Alberti A, Aury JM, Louis A, Dehais P, Bardou P, Montfort J, Klopp C, Cabau C, Gaspin C, Thorgaard GH, Boussaha M, Quillet E, Guyomard R, Galiana D, Bobe J, Volff JN, Gen?t C, Wincker P, Jaillon O, Roest Crollius H, Guiguen Y
Nature communications53657(2014 Apr)

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches.
Salem M, Rexroad CE 3rd, Wang J, Thorgaard GH, Yao J
BMC genomics11564(2010 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cirbp gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cirbp cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OOf00238	NM_001165119.1 Latest version!	Oncorhynchus mykiss cold inducible RNA binding protein (cirbp), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cirbp ( NM_001165119.1 ) cDNA ORF clone, Oncorhynchus mykiss(rainbow trout) -> NP_001158591.1 Oncorhynchus mykiss cold inducible RNA binding protein (cirbp), mRNA.

Price & Availability↑

CloneID	OOf00238
Clone ID Related Accession (Same CDS sequence)	NM_001165119.1
Accession Version	NM_001165119.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 630bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-09
Organism	Oncorhynchus mykiss(rainbow trout)
Product	cold inducible RNA binding protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT073963.1. ##Evidence-Data-START## Transcript exon combination :: BT073963.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00041048, SAMD00041049 [ECO:0000350] ##Evidence-Data-END##

ATGTCTGACG AAGGAAAGCT TTTTGTTGGA GGATTGTGTT TTGACACAGA TGAAACTTCA 
CTGGAAGAGG CGTTTTCCAA GTACGGCAAC ATTGCTAAAG TTGATGTTGT AAGAGACAGA 
GAGACTCGGA GGTCCAGGGG TTTCGGCTTT GTGACTTTTG AAAACCCTGA AGATGCCAAA 
GATGCAATGG CTGCAATGAA TGGCAAGTCT GTTGATGGCA GGATGATCCG TGTGGATGAA 
GCTGGCAAGT CAGGAGGAAG ATCTGACCGT GGTGGTGGTG GTGGCTTCAG GGGGGGTTCT 
GGCGGTTTCA GAGGGGGTTC TGGTGGCTTC AGAGGAGGCA GAGGAAGAGG TGGCGGCTAT 
GGTGGAGGAG ACCGAAGCTA TGGTGGTGAC AGAAGCTATG GTGGAGGAGA GAGAAGCTAT 
GGGGGAGAGA GAAGCTATGG AGGTGACAGA AGTTACGGTG GTGGAGGAGA CAGGAGTTAC 
GGTGGTAGCT ACAGGAGTGG TGGAGGATAC TCCTCTGGGG GTGGCAGCGG AGGTTACAGA 
GAGGCCAGGA GTGGTGGTGA AAGTGGTTAT GGTGGCCGCT CTGGGGGATC CTACAGAGAC 
AGCTATGACA GCTATGCTAC ACACGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001158591.1
CDS	35..664
Translation	MSDEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAAMNGKSVDGRMIRVDEAGKSGGRSDRGGGGGFRGGSGGFRGGSGGFRGGRGRGGGYGGGDRSYGGDRSYGGGERSYGGERSYGGDRSYGGGGDRSYGGSYRSGGGYSSGGGSGGYREARSGGESGYGGRSGGSYRDSYDSYATHE

Target ORF information:

RefSeq Version	NM_001165119.1
Organism	Oncorhynchus mykiss(rainbow trout)
Definition	Oncorhynchus mykiss cold inducible RNA binding protein (cirbp), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001165119.1

ORF Insert Sequence:

ATGTCTGACG AAGGAAAGCT TTTTGTTGGA GGATTGTGTT TTGACACAGA TGAAACTTCA 
CTGGAAGAGG CGTTTTCCAA GTACGGCAAC ATTGCTAAAG TTGATGTTGT AAGAGACAGA 
GAGACTCGGA GGTCCAGGGG TTTCGGCTTT GTGACTTTTG AAAACCCTGA AGATGCCAAA 
GATGCAATGG CTGCAATGAA TGGCAAGTCT GTTGATGGCA GGATGATCCG TGTGGATGAA 
GCTGGCAAGT CAGGAGGAAG ATCTGACCGT GGTGGTGGTG GTGGCTTCAG GGGGGGTTCT 
GGCGGTTTCA GAGGGGGTTC TGGTGGCTTC AGAGGAGGCA GAGGAAGAGG TGGCGGCTAT 
GGTGGAGGAG ACCGAAGCTA TGGTGGTGAC AGAAGCTATG GTGGAGGAGA GAGAAGCTAT 
GGGGGAGAGA GAAGCTATGG AGGTGACAGA AGTTACGGTG GTGGAGGAGA CAGGAGTTAC 
GGTGGTAGCT ACAGGAGTGG TGGAGGATAC TCCTCTGGGG GTGGCAGCGG AGGTTACAGA 
GAGGCCAGGA GTGGTGGTGA AAGTGGTTAT GGTGGCCGCT CTGGGGGATC CTACAGAGAC 
AGCTATGACA GCTATGCTAC ACACGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates.
Nature communications53657(2014 Apr)
Berthelot C,Brunet F,Chalopin D,Juanchich A,Bernard M,No?l B,Bento P,Da Silva C,Labadie K,Alberti A,Aury JM,Louis A,Dehais P,Bardou P,Montfort J,Klopp C,Cabau C,Gaspin C,Thorgaard GH,Boussaha M,Quillet E,Guyomard R,Galiana D,Bobe J,Volff JN,Gen?t C,Wincker P,Jaillon O,Roest Crollius H,Guiguen Y

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches.
BMC genomics11564(2010 Oct)
Salem M,Rexroad CE 3rd,Wang J,Thorgaard GH,Yao J