ORF » Species Summary » Medicago truncatula » LOC25482697 cDNA ORF clone

LOC25482697 cDNA ORF clone, Medicago truncatula(barrel medic)

The following LOC25482697 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC25482697 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe209986 XM_013611288.2
Latest version!		 Medicago truncatula protein ROOT INITIATION DEFECTIVE 3 (LOC25482697), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
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OMe209986 XM_013611288.1 Medicago truncatula transducin/WD40 repeat protein mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC25482697 ( XM_013611288.1 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_013466742.1 Medicago truncatula transducin/WD40 repeat protein mRNA.
    Price & Availability↑
    CloneID OMe209986
    Clone ID Related Accession (Same CDS sequence) XM_013611288.1 , XM_013611288.2
    Accession Version XM_013611288.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1317bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product transducin/WD40 repeat protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016407). ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGATGTTG TTTTGGCCTC TTCATCTGTT GACGATGGGA TAGGTTGTTG GGACCTTCAT 
    ACAGGTGCTG AGCAGCTACG TTACAATTCA TGTTCTTCAC CTTTCCATGG CCTTGTCTCT 
    CTCGGTTCTC GCTTTCTTGC TTCTTCTCAG CTTCATCACC CTTCTTCTGC TTCTCTTTTC 
    TTCTGGTCCT TCTCCAAGCC TCAAGTTGAA GTTAAGAGCT TTCCTGCTGA AGCTATTAAG 
    CCCCTTGCTG CTAATCACCA AGGCACCTAT CTGGTCGGTG GAGCTTTGTC TGGTGATATA 
    TATTTGTGGG AGGTTGAAAC TGGTAGATTG CTTAAGAAAT GGCATGCTCA TTTAAGGGCC 
    GTCACTTGCC TGGTATTTTC TGATGATGAC TCACTGCTGA TATCTGGTTC TGAAGATGGA 
    TATGTAAGAG TTTGGTCGCT TTTCAGTTTA TTTGATGATT TGAGAAGCCG GGAAGAAAAG 
    AATCTCTACG AGTATAGTTT TTCGGAGCAC ACCATGCGTG TAACTGATGT TGTGATTGGT 
    AATGGAGGGT GCAATGCAAT TATAGTTTCA GCATCAGACG ATCGGACTTG TAAGGTATGG 
    AGCTTATCGA GGGGAACACT GCTAAGAAGT ATAGTTTTCC CTTCAGTAAT TAATGCCATT 
    GTATTGGATC CAGCTGAACA TGTGTTTTAT GCCGGGAGTA GTGATGGAAA AATATTTATT 
    GCTGCACTTA ACACTGAAAG AATCACTACT ATTGATAATT ATGGGATGCA TATCATTGGT 
    TCATTTTCTA ATCACAGCAA GGCAGTTACT TGCTTAGCAT ATAGCAAAGG TCGGAATTTG 
    TTAATTTCTG GGTCTGAGGA TGGAATAGTT CGTGTTTGGA ATGCTAAAAC TCACAACATT 
    GTCCGCATGT TTAAACATGC TAAAGGACCT ATAACTAATA TTATTGTTGT TAGACAAGAA 
    ATTGACCCAA GCAATCATAC ATCTTCTAAT TTACAAGCAG CCACAAAGAA ACATGGGTCT 
    TATTTACTCC CTCCATTAGA AAAATATGCA AATTCAACAG ATTCAGATTT AAAGACTGCT 
    ATCAACCTAG GTGGTATCAG GGGATGCATG GATGTTTCAT ACAACAGTTC TAATTTGATA 
    TCTAATCACA TTAAGGAGCT TCAGCAACAA GGTTCAGCCA CCGCTTCTGA AATCGAGATG 
    GAGAAACTAA AGCATGAGTA CCAAAGGACA ATGGAGATGG CTAACCAATG GAAGAAAATG 
    TATGAGAACT TGCACGAATT TGGTATAAAG GAGCTATTGG ATGGTGGCCA AACATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013466742.1
    CDS135..1451
    Translation

    Target ORF information:

    RefSeq Version XM_013611288.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula transducin/WD40 repeat protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_013611288.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGATGTTG TTTTGGCCTC TTCATCTGTT GACGATGGGA TAGGTTGTTG GGACCTTCAT 
    ACAGGTGCTG AGCAGCTACG TTACAATTCA TGTTCTTCAC CTTTCCATGG CCTTGTCTCT 
    CTCGGTTCTC GCTTTCTTGC TTCTTCTCAG CTTCATCACC CTTCTTCTGC TTCTCTTTTC 
    TTCTGGTCCT TCTCCAAGCC TCAAGTTGAA GTTAAGAGCT TTCCTGCTGA AGCTATTAAG 
    CCCCTTGCTG CTAATCACCA AGGCACCTAT CTGGTCGGTG GAGCTTTGTC TGGTGATATA 
    TATTTGTGGG AGGTTGAAAC TGGTAGATTG CTTAAGAAAT GGCATGCTCA TTTAAGGGCC 
    GTCACTTGCC TGGTATTTTC TGATGATGAC TCACTGCTGA TATCTGGTTC TGAAGATGGA 
    TATGTAAGAG TTTGGTCGCT TTTCAGTTTA TTTGATGATT TGAGAAGCCG GGAAGAAAAG 
    AATCTCTACG AGTATAGTTT TTCGGAGCAC ACCATGCGTG TAACTGATGT TGTGATTGGT 
    AATGGAGGGT GCAATGCAAT TATAGTTTCA GCATCAGACG ATCGGACTTG TAAGGTATGG 
    AGCTTATCGA GGGGAACACT GCTAAGAAGT ATAGTTTTCC CTTCAGTAAT TAATGCCATT 
    GTATTGGATC CAGCTGAACA TGTGTTTTAT GCCGGGAGTA GTGATGGAAA AATATTTATT 
    GCTGCACTTA ACACTGAAAG AATCACTACT ATTGATAATT ATGGGATGCA TATCATTGGT 
    TCATTTTCTA ATCACAGCAA GGCAGTTACT TGCTTAGCAT ATAGCAAAGG TCGGAATTTG 
    TTAATTTCTG GGTCTGAGGA TGGAATAGTT CGTGTTTGGA ATGCTAAAAC TCACAACATT 
    GTCCGCATGT TTAAACATGC TAAAGGACCT ATAACTAATA TTATTGTTGT TAGACAAGAA 
    ATTGACCCAA GCAATCATAC ATCTTCTAAT TTACAAGCAG CCACAAAGAA ACATGGGTCT 
    TATTTACTCC CTCCATTAGA AAAATATGCA AATTCAACAG ATTCAGATTT AAAGACTGCT 
    ATCAACCTAG GTGGTATCAG GGGATGCATG GATGTTTCAT ACAACAGTTC TAATTTGATA 
    TCTAATCACA TTAAGGAGCT TCAGCAACAA GGTTCAGCCA CCGCTTCTGA AATCGAGATG 
    GAGAAACTAA AGCATGAGTA CCAAAGGACA ATGGAGATGG CTAACCAATG GAAGAAAATG 
    TATGAGAACT TGCACGAATT TGGTATAAAG GAGCTATTGG ATGGTGGCCA AACATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC25482697 ( XM_013611288.2 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_013466742.1 Medicago truncatula protein ROOT INITIATION DEFECTIVE 3 (LOC25482697), mRNA.
    Price & Availability↑
    CloneID OMe209986
    Clone ID Related Accession (Same CDS sequence) XM_013611288.1 , XM_013611288.2
    Accession Version XM_013611288.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1317bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product protein ROOT INITIATION DEFECTIVE 3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016407.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_013611288.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGATGTTG TTTTGGCCTC TTCATCTGTT GACGATGGGA TAGGTTGTTG GGACCTTCAT 
    ACAGGTGCTG AGCAGCTACG TTACAATTCA TGTTCTTCAC CTTTCCATGG CCTTGTCTCT 
    CTCGGTTCTC GCTTTCTTGC TTCTTCTCAG CTTCATCACC CTTCTTCTGC TTCTCTTTTC 
    TTCTGGTCCT TCTCCAAGCC TCAAGTTGAA GTTAAGAGCT TTCCTGCTGA AGCTATTAAG 
    CCCCTTGCTG CTAATCACCA AGGCACCTAT CTGGTCGGTG GAGCTTTGTC TGGTGATATA 
    TATTTGTGGG AGGTTGAAAC TGGTAGATTG CTTAAGAAAT GGCATGCTCA TTTAAGGGCC 
    GTCACTTGCC TGGTATTTTC TGATGATGAC TCACTGCTGA TATCTGGTTC TGAAGATGGA 
    TATGTAAGAG TTTGGTCGCT TTTCAGTTTA TTTGATGATT TGAGAAGCCG GGAAGAAAAG 
    AATCTCTACG AGTATAGTTT TTCGGAGCAC ACCATGCGTG TAACTGATGT TGTGATTGGT 
    AATGGAGGGT GCAATGCAAT TATAGTTTCA GCATCAGACG ATCGGACTTG TAAGGTATGG 
    AGCTTATCGA GGGGAACACT GCTAAGAAGT ATAGTTTTCC CTTCAGTAAT TAATGCCATT 
    GTATTGGATC CAGCTGAACA TGTGTTTTAT GCCGGGAGTA GTGATGGAAA AATATTTATT 
    GCTGCACTTA ACACTGAAAG AATCACTACT ATTGATAATT ATGGGATGCA TATCATTGGT 
    TCATTTTCTA ATCACAGCAA GGCAGTTACT TGCTTAGCAT ATAGCAAAGG TCGGAATTTG 
    TTAATTTCTG GGTCTGAGGA TGGAATAGTT CGTGTTTGGA ATGCTAAAAC TCACAACATT 
    GTCCGCATGT TTAAACATGC TAAAGGACCT ATAACTAATA TTATTGTTGT TAGACAAGAA 
    ATTGACCCAA GCAATCATAC ATCTTCTAAT TTACAAGCAG CCACAAAGAA ACATGGGTCT 
    TATTTACTCC CTCCATTAGA AAAATATGCA AATTCAACAG ATTCAGATTT AAAGACTGCT 
    ATCAACCTAG GTGGTATCAG GGGATGCATG GATGTTTCAT ACAACAGTTC TAATTTGATA 
    TCTAATCACA TTAAGGAGCT TCAGCAACAA GGTTCAGCCA CCGCTTCTGA AATCGAGATG 
    GAGAAACTAA AGCATGAGTA CCAAAGGACA ATGGAGATGG CTAACCAATG GAAGAAAATG 
    TATGAGAACT TGCACGAATT TGGTATAAAG GAGCTATTGG ATGGTGGCCA AACATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013466742.1
    CDS134..1450
    Translation

    Target ORF information:

    RefSeq Version XM_013611288.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula protein ROOT INITIATION DEFECTIVE 3 (LOC25482697), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_013611288.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGATGTTG TTTTGGCCTC TTCATCTGTT GACGATGGGA TAGGTTGTTG GGACCTTCAT 
    ACAGGTGCTG AGCAGCTACG TTACAATTCA TGTTCTTCAC CTTTCCATGG CCTTGTCTCT 
    CTCGGTTCTC GCTTTCTTGC TTCTTCTCAG CTTCATCACC CTTCTTCTGC TTCTCTTTTC 
    TTCTGGTCCT TCTCCAAGCC TCAAGTTGAA GTTAAGAGCT TTCCTGCTGA AGCTATTAAG 
    CCCCTTGCTG CTAATCACCA AGGCACCTAT CTGGTCGGTG GAGCTTTGTC TGGTGATATA 
    TATTTGTGGG AGGTTGAAAC TGGTAGATTG CTTAAGAAAT GGCATGCTCA TTTAAGGGCC 
    GTCACTTGCC TGGTATTTTC TGATGATGAC TCACTGCTGA TATCTGGTTC TGAAGATGGA 
    TATGTAAGAG TTTGGTCGCT TTTCAGTTTA TTTGATGATT TGAGAAGCCG GGAAGAAAAG 
    AATCTCTACG AGTATAGTTT TTCGGAGCAC ACCATGCGTG TAACTGATGT TGTGATTGGT 
    AATGGAGGGT GCAATGCAAT TATAGTTTCA GCATCAGACG ATCGGACTTG TAAGGTATGG 
    AGCTTATCGA GGGGAACACT GCTAAGAAGT ATAGTTTTCC CTTCAGTAAT TAATGCCATT 
    GTATTGGATC CAGCTGAACA TGTGTTTTAT GCCGGGAGTA GTGATGGAAA AATATTTATT 
    GCTGCACTTA ACACTGAAAG AATCACTACT ATTGATAATT ATGGGATGCA TATCATTGGT 
    TCATTTTCTA ATCACAGCAA GGCAGTTACT TGCTTAGCAT ATAGCAAAGG TCGGAATTTG 
    TTAATTTCTG GGTCTGAGGA TGGAATAGTT CGTGTTTGGA ATGCTAAAAC TCACAACATT 
    GTCCGCATGT TTAAACATGC TAAAGGACCT ATAACTAATA TTATTGTTGT TAGACAAGAA 
    ATTGACCCAA GCAATCATAC ATCTTCTAAT TTACAAGCAG CCACAAAGAA ACATGGGTCT 
    TATTTACTCC CTCCATTAGA AAAATATGCA AATTCAACAG ATTCAGATTT AAAGACTGCT 
    ATCAACCTAG GTGGTATCAG GGGATGCATG GATGTTTCAT ACAACAGTTC TAATTTGATA 
    TCTAATCACA TTAAGGAGCT TCAGCAACAA GGTTCAGCCA CCGCTTCTGA AATCGAGATG 
    GAGAAACTAA AGCATGAGTA CCAAAGGACA ATGGAGATGG CTAACCAATG GAAGAAAATG 
    TATGAGAACT TGCACGAATT TGGTATAAAG GAGCTATTGG ATGGTGGCCA AACATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
    Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA


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