ORF » Species Summary » Medicago truncatula » MTR_1g100880 cDNA ORF clone

MTR_1g100880 cDNA ORF clone, Medicago truncatula(barrel medic)

The following MTR_1g100880 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MTR_1g100880 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe208186 XM_003592212.3
Latest version!		 Medicago truncatula uncharacterized protein At3g49055 (LOC11428503), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
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OMe208186 XM_003592212.2 Medicago truncatula ATP-binding protein, putative partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    MTR_1g100880 ( XM_003592212.3 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003592260.2 Medicago truncatula uncharacterized protein At3g49055 (LOC11428503), mRNA.
    Price & Availability↑
    CloneID OMe208186
    Clone ID Related Accession (Same CDS sequence) XM_003592212.3 , XM_003592212.2
    Accession Version XM_003592212.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1371bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product uncharacterized protein At3g49055
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016407.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_003592212.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGAACAAT CCTATCAACC ATCCTCCAAT CAGTCCAAAC TCAACAATCC AAATTCACCC 
    TACACCTCTG AAGTTTCCGA CCATAGTCTT CATTCAGATA AAGTTCCTTA CTTTGAAACT 
    GTTTTGAGAG AAAAACAGGA TGTATTGGAG GGAAATGAAG TGGAAGATAT CAAAGAAAGA 
    GTTGAGAAAG AAGAGAAAAA TGGGTTGATG TTAAGGGCTT TTGAATCCTT CACTTCAATA 
    AAGGATTCTT TATCTAGAGT AAAAGAGAGT TTAGAGGGAA AAAAGGATGA AACTTTTGTC 
    AGAGAAATAG TTTGTGTGGA ATCAGAGTTA AGAGATGAAT CGATGGTGTT ATTATTGGAA 
    GAGGCAAGTT TTATATCAAG GCTTGCAACT GAGGTGGAAA CAAAGGTGGA AAATTATAAG 
    GAGTTAAGGA AAAAGGAGAA GAGAGAGTTG GAGAATAGTT TGATAAGCTT AACTGAAGAG 
    AATAGGGATA TCAATAACTT GCTTAGGGTT GCTTTGTTGG AGAAAGAAGC ATTGGAGAAG 
    AAAATAAAGG GACATGATCA TAAAAGGATG CCTCTATTGC AGTTTGCTGA GTTTGGATTG 
    CAGAAAGTTG GGTTTAGATT CATGATGGGA GGTGGTAATA ATGAGCAATC AATGGATAGT 
    ACTTCTGAGG CTAACAATTC AGATAGCAGT GAGTGTGAAG TGGAAGTTGT TAGTTTGGCC 
    TCAACAGTGG AAAGGATAAT GAAGAATCTA CGCCTTGAAA TCACTCAATT GAGAAAATCT 
    TTGGAAGAAT CTAGGTCAGA CACAGAGCGC CTCCAGTGTC TCACAGAGAA ACAAACCAAA 
    GAGATTGCAG AAAACAAACT CTACATCAAG GAGTTAGAAG ATAGAGAGAG AATCTTAGCT 
    CAAAATGTAG AGGAGTTTTT GATTGAAATC AAAGAGACAG AAGAAGAAGT AGCTAGATGG 
    AAGGAAGCTT GTGAATTGGA AGTTAAAGCT GGAAAGAAAG AGATTGAAGA GCGTGACAAA 
    ATGGTGGCTG CATTGAAACA AGAACTGCAG AAAACAAAGG GTGCTTTGGA GATATCCAAT 
    GGGAAATTAA GACTAAAAGA AGAACTGGCA ATGACTGCAA TAGCTGCACA GGAAGCAGCA 
    GAGAGATCAT TGAAGCTAGC TGATAGTAGA GGAGTTGAAC TGCGTCGGTG GATAGAGGAA 
    CTAACCAGAC AACTAGAGGA ATCAGAGAAA CGTGAATGTA ATAGTCATAA AGTGAGTCGA 
    CGAATATGTT GGCCATGGCA AGTTTTCAGA TTGAGTTCTA GCAATATTGC TACCTCTAGA 
    ATTGGAAATG CCAAAAGGAT GATACCAGAA ATGCAATCCT TTCTTCAATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003592260.2
    CDS223..1593
    Translation

    Target ORF information:

    RefSeq Version XM_003592212.3
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula uncharacterized protein At3g49055 (LOC11428503), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_003592212.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGAACAAT CCTATCAACC ATCCTCCAAT CAGTCCAAAC TCAACAATCC AAATTCACCC 
    TACACCTCTG AAGTTTCCGA CCATAGTCTT CATTCAGATA AAGTTCCTTA CTTTGAAACT 
    GTTTTGAGAG AAAAACAGGA TGTATTGGAG GGAAATGAAG TGGAAGATAT CAAAGAAAGA 
    GTTGAGAAAG AAGAGAAAAA TGGGTTGATG TTAAGGGCTT TTGAATCCTT CACTTCAATA 
    AAGGATTCTT TATCTAGAGT AAAAGAGAGT TTAGAGGGAA AAAAGGATGA AACTTTTGTC 
    AGAGAAATAG TTTGTGTGGA ATCAGAGTTA AGAGATGAAT CGATGGTGTT ATTATTGGAA 
    GAGGCAAGTT TTATATCAAG GCTTGCAACT GAGGTGGAAA CAAAGGTGGA AAATTATAAG 
    GAGTTAAGGA AAAAGGAGAA GAGAGAGTTG GAGAATAGTT TGATAAGCTT AACTGAAGAG 
    AATAGGGATA TCAATAACTT GCTTAGGGTT GCTTTGTTGG AGAAAGAAGC ATTGGAGAAG 
    AAAATAAAGG GACATGATCA TAAAAGGATG CCTCTATTGC AGTTTGCTGA GTTTGGATTG 
    CAGAAAGTTG GGTTTAGATT CATGATGGGA GGTGGTAATA ATGAGCAATC AATGGATAGT 
    ACTTCTGAGG CTAACAATTC AGATAGCAGT GAGTGTGAAG TGGAAGTTGT TAGTTTGGCC 
    TCAACAGTGG AAAGGATAAT GAAGAATCTA CGCCTTGAAA TCACTCAATT GAGAAAATCT 
    TTGGAAGAAT CTAGGTCAGA CACAGAGCGC CTCCAGTGTC TCACAGAGAA ACAAACCAAA 
    GAGATTGCAG AAAACAAACT CTACATCAAG GAGTTAGAAG ATAGAGAGAG AATCTTAGCT 
    CAAAATGTAG AGGAGTTTTT GATTGAAATC AAAGAGACAG AAGAAGAAGT AGCTAGATGG 
    AAGGAAGCTT GTGAATTGGA AGTTAAAGCT GGAAAGAAAG AGATTGAAGA GCGTGACAAA 
    ATGGTGGCTG CATTGAAACA AGAACTGCAG AAAACAAAGG GTGCTTTGGA GATATCCAAT 
    GGGAAATTAA GACTAAAAGA AGAACTGGCA ATGACTGCAA TAGCTGCACA GGAAGCAGCA 
    GAGAGATCAT TGAAGCTAGC TGATAGTAGA GGAGTTGAAC TGCGTCGGTG GATAGAGGAA 
    CTAACCAGAC AACTAGAGGA ATCAGAGAAA CGTGAATGTA ATAGTCATAA AGTGAGTCGA 
    CGAATATGTT GGCCATGGCA AGTTTTCAGA TTGAGTTCTA GCAATATTGC TACCTCTAGA 
    ATTGGAAATG CCAAAAGGAT GATACCAGAA ATGCAATCCT TTCTTCAATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    MTR_1g100880 ( XM_003592212.2 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003592260.2 Medicago truncatula ATP-binding protein, putative partial mRNA.
    Price & Availability↑
    CloneID OMe208186
    Clone ID Related Accession (Same CDS sequence) XM_003592212.3 , XM_003592212.2
    Accession Version XM_003592212.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1371bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product ATP-binding protein, putative
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016407). On Aug 25, 2015 this sequence version replaced XM_003592212.1. ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGAACAAT CCTATCAACC ATCCTCCAAT CAGTCCAAAC TCAACAATCC AAATTCACCC 
    TACACCTCTG AAGTTTCCGA CCATAGTCTT CATTCAGATA AAGTTCCTTA CTTTGAAACT 
    GTTTTGAGAG AAAAACAGGA TGTATTGGAG GGAAATGAAG TGGAAGATAT CAAAGAAAGA 
    GTTGAGAAAG AAGAGAAAAA TGGGTTGATG TTAAGGGCTT TTGAATCCTT CACTTCAATA 
    AAGGATTCTT TATCTAGAGT AAAAGAGAGT TTAGAGGGAA AAAAGGATGA AACTTTTGTC 
    AGAGAAATAG TTTGTGTGGA ATCAGAGTTA AGAGATGAAT CGATGGTGTT ATTATTGGAA 
    GAGGCAAGTT TTATATCAAG GCTTGCAACT GAGGTGGAAA CAAAGGTGGA AAATTATAAG 
    GAGTTAAGGA AAAAGGAGAA GAGAGAGTTG GAGAATAGTT TGATAAGCTT AACTGAAGAG 
    AATAGGGATA TCAATAACTT GCTTAGGGTT GCTTTGTTGG AGAAAGAAGC ATTGGAGAAG 
    AAAATAAAGG GACATGATCA TAAAAGGATG CCTCTATTGC AGTTTGCTGA GTTTGGATTG 
    CAGAAAGTTG GGTTTAGATT CATGATGGGA GGTGGTAATA ATGAGCAATC AATGGATAGT 
    ACTTCTGAGG CTAACAATTC AGATAGCAGT GAGTGTGAAG TGGAAGTTGT TAGTTTGGCC 
    TCAACAGTGG AAAGGATAAT GAAGAATCTA CGCCTTGAAA TCACTCAATT GAGAAAATCT 
    TTGGAAGAAT CTAGGTCAGA CACAGAGCGC CTCCAGTGTC TCACAGAGAA ACAAACCAAA 
    GAGATTGCAG AAAACAAACT CTACATCAAG GAGTTAGAAG ATAGAGAGAG AATCTTAGCT 
    CAAAATGTAG AGGAGTTTTT GATTGAAATC AAAGAGACAG AAGAAGAAGT AGCTAGATGG 
    AAGGAAGCTT GTGAATTGGA AGTTAAAGCT GGAAAGAAAG AGATTGAAGA GCGTGACAAA 
    ATGGTGGCTG CATTGAAACA AGAACTGCAG AAAACAAAGG GTGCTTTGGA GATATCCAAT 
    GGGAAATTAA GACTAAAAGA AGAACTGGCA ATGACTGCAA TAGCTGCACA GGAAGCAGCA 
    GAGAGATCAT TGAAGCTAGC TGATAGTAGA GGAGTTGAAC TGCGTCGGTG GATAGAGGAA 
    CTAACCAGAC AACTAGAGGA ATCAGAGAAA CGTGAATGTA ATAGTCATAA AGTGAGTCGA 
    CGAATATGTT GGCCATGGCA AGTTTTCAGA TTGAGTTCTA GCAATATTGC TACCTCTAGA 
    ATTGGAAATG CCAAAAGGAT GATACCAGAA ATGCAATCCT TTCTTCAATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003592260.2
    CDS1..1371
    Translation

    Target ORF information:

    RefSeq Version XM_003592212.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula ATP-binding protein, putative partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_003592212.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGAACAAT CCTATCAACC ATCCTCCAAT CAGTCCAAAC TCAACAATCC AAATTCACCC 
    TACACCTCTG AAGTTTCCGA CCATAGTCTT CATTCAGATA AAGTTCCTTA CTTTGAAACT 
    GTTTTGAGAG AAAAACAGGA TGTATTGGAG GGAAATGAAG TGGAAGATAT CAAAGAAAGA 
    GTTGAGAAAG AAGAGAAAAA TGGGTTGATG TTAAGGGCTT TTGAATCCTT CACTTCAATA 
    AAGGATTCTT TATCTAGAGT AAAAGAGAGT TTAGAGGGAA AAAAGGATGA AACTTTTGTC 
    AGAGAAATAG TTTGTGTGGA ATCAGAGTTA AGAGATGAAT CGATGGTGTT ATTATTGGAA 
    GAGGCAAGTT TTATATCAAG GCTTGCAACT GAGGTGGAAA CAAAGGTGGA AAATTATAAG 
    GAGTTAAGGA AAAAGGAGAA GAGAGAGTTG GAGAATAGTT TGATAAGCTT AACTGAAGAG 
    AATAGGGATA TCAATAACTT GCTTAGGGTT GCTTTGTTGG AGAAAGAAGC ATTGGAGAAG 
    AAAATAAAGG GACATGATCA TAAAAGGATG CCTCTATTGC AGTTTGCTGA GTTTGGATTG 
    CAGAAAGTTG GGTTTAGATT CATGATGGGA GGTGGTAATA ATGAGCAATC AATGGATAGT 
    ACTTCTGAGG CTAACAATTC AGATAGCAGT GAGTGTGAAG TGGAAGTTGT TAGTTTGGCC 
    TCAACAGTGG AAAGGATAAT GAAGAATCTA CGCCTTGAAA TCACTCAATT GAGAAAATCT 
    TTGGAAGAAT CTAGGTCAGA CACAGAGCGC CTCCAGTGTC TCACAGAGAA ACAAACCAAA 
    GAGATTGCAG AAAACAAACT CTACATCAAG GAGTTAGAAG ATAGAGAGAG AATCTTAGCT 
    CAAAATGTAG AGGAGTTTTT GATTGAAATC AAAGAGACAG AAGAAGAAGT AGCTAGATGG 
    AAGGAAGCTT GTGAATTGGA AGTTAAAGCT GGAAAGAAAG AGATTGAAGA GCGTGACAAA 
    ATGGTGGCTG CATTGAAACA AGAACTGCAG AAAACAAAGG GTGCTTTGGA GATATCCAAT 
    GGGAAATTAA GACTAAAAGA AGAACTGGCA ATGACTGCAA TAGCTGCACA GGAAGCAGCA 
    GAGAGATCAT TGAAGCTAGC TGATAGTAGA GGAGTTGAAC TGCGTCGGTG GATAGAGGAA 
    CTAACCAGAC AACTAGAGGA ATCAGAGAAA CGTGAATGTA ATAGTCATAA AGTGAGTCGA 
    CGAATATGTT GGCCATGGCA AGTTTTCAGA TTGAGTTCTA GCAATATTGC TACCTCTAGA 
    ATTGGAAATG CCAAAAGGAT GATACCAGAA ATGCAATCCT TTCTTCAATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
    Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA


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