ORF » Species Summary » Populus trichocarpa » POPTR_0017s05270g cDNA ORF clone

POPTR_0017s05270g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0017s05270g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0017s05270g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa34651 XM_006372749.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0017s05270g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
OPa446440 XM_024588811.1
Latest version!		 Populus trichocarpa UPF0481 protein At3g47200 (LOC18106859), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0017s05270g ( XM_006372749.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006372811.1 Populus trichocarpa hypothetical protein (POPTR_0017s05270g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa34651
    Clone ID Related Accession (Same CDS sequence) XM_006372749.1
    Accession Version XM_006372749.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1275bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008483). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGAGAGG ACAAGGCAAG TACTCCAAAC AAGGGAAAAG ATATTGATGT GGGAAGTGCT 
    TCAGGCATTG AGATGGCTAC AAATCCCGAT TATTATCAAA ATAGAGAGAG AGAGAAAGCT 
    ACAGATATTT TGGCAAAGCT GGATTCTGAG GTGAAACAGA TGTCCTTTAA ACGGAACGGT 
    TCCGAGTGCT GCATCTACAG GGTGCCCGAA CCGCTTCGAA ACGTAAATTT GGAAGCCTAC 
    TCTCCACTAC TGATTTCAAT AGGTCCTCTT AACCGCCAAA ATATAAGACT AGAGGCCATG 
    GAAAAGGAGA AACTGAAATA TTTCAAAAAG CTTACTGAAC GGGATGGGAT GGATAAGAAG 
    AAAATTATTG ATATTTTGAT CAGCATTGAG AACCAAGAAG AGCGTCTCCG ACACTGTTAT 
    TCAGAGAAAT TCAATTTAAT CAAGAGCCGT GATTTCGTAA AGATGATCCT GCTGGATGCT 
    GTCTTCATCA TTCAGTTTTT GTTGGAGTCA AAGGATCATG ATAACGATCC TAAGAATTTT 
    GAGCCCAGGA TGACATTTGA CATCCGAGAA GACTTGATGC TACTTGAAAA CCAACTGCCA 
    TTCTTCATTA TTCAGGAAAT ATATGACCAG GTCAATCCCC CTAGCCAGGA TGGTACAACC 
    ATTCCTTTTC TTGATCTTGC AAAGTGTCAT TTTGGAAAGC ACAAGTTTTC ACAGGGGGCA 
    GAAACCAGCC CGAGTGTAAA GGGAAGCAGG CATTTCACTG ATTTACTAAG GAATTTGATG 
    TTGAATGGAG CCATTCAGCG AAGTTATATT TTTTATCCTA TCAAGCTGAA ATATAGTGCG 
    GTCATGCTTC GCAAGGCAGG AGTGAAGTTT CAGGTCACCC AAGACAAATG TTTGGTCAAC 
    ATAACATTTG ACAAAGGAGT GTTGAAAATT CCACAGTTGG AAGTTGATCA CAGCTTCGAA 
    CGTCTTGTAC GAAATATCAT GGCCTTGGAG CAGTGCTGCA ACCCGCTCCC AAAGGGAATC 
    ATTCTCAACC GGCTAGGTGA AGATGCCGCA GTTTCAAATA TGATTAACAA TTTTTGCGAA 
    AATATTGGTG ACAATTATAC TTGTTTTGGT GATATCTCTC GAGAGATAAA TGCCCACTAC 
    GAGAGCCGCT TTAACCATAT GAAAGCAACC TTGAAACTCG TATATTTCCC CAATATTTGG 
    AGAGGTACGG CAACAGTTGC AGCTGCTATC CTCCTGATCC TCACTTTGAT ACAGACTATA 
    AAATCATTCT TTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006372811.1
    CDS1..1275
    Translation

    Target ORF information:

    RefSeq Version XM_006372749.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0017s05270g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006372749.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGGAGAGG ACAAGGCAAG TACTCCAAAC AAGGGAAAAG ATATTGATGT GGGAAGTGCT 
    TCAGGCATTG AGATGGCTAC AAATCCCGAT TATTATCAAA ATAGAGAGAG AGAGAAAGCT 
    ACAGATATTT TGGCAAAGCT GGATTCTGAG GTGAAACAGA TGTCCTTTAA ACGGAACGGT 
    TCCGAGTGCT GCATCTACAG GGTGCCCGAA CCGCTTCGAA ACGTAAATTT GGAAGCCTAC 
    TCTCCACTAC TGATTTCAAT AGGTCCTCTT AACCGCCAAA ATATAAGACT AGAGGCCATG 
    GAAAAGGAGA AACTGAAATA TTTCAAAAAG CTTACTGAAC GGGATGGGAT GGATAAGAAG 
    AAAATTATTG ATATTTTGAT CAGCATTGAG AACCAAGAAG AGCGTCTCCG ACACTGTTAT 
    TCAGAGAAAT TCAATTTAAT CAAGAGCCGT GATTTCGTAA AGATGATCCT GCTGGATGCT 
    GTCTTCATCA TTCAGTTTTT GTTGGAGTCA AAGGATCATG ATAACGATCC TAAGAATTTT 
    GAGCCCAGGA TGACATTTGA CATCCGAGAA GACTTGATGC TACTTGAAAA CCAACTGCCA 
    TTCTTCATTA TTCAGGAAAT ATATGACCAG GTCAATCCCC CTAGCCAGGA TGGTACAACC 
    ATTCCTTTTC TTGATCTTGC AAAGTGTCAT TTTGGAAAGC ACAAGTTTTC ACAGGGGGCA 
    GAAACCAGCC CGAGTGTAAA GGGAAGCAGG CATTTCACTG ATTTACTAAG GAATTTGATG 
    TTGAATGGAG CCATTCAGCG AAGTTATATT TTTTATCCTA TCAAGCTGAA ATATAGTGCG 
    GTCATGCTTC GCAAGGCAGG AGTGAAGTTT CAGGTCACCC AAGACAAATG TTTGGTCAAC 
    ATAACATTTG ACAAAGGAGT GTTGAAAATT CCACAGTTGG AAGTTGATCA CAGCTTCGAA 
    CGTCTTGTAC GAAATATCAT GGCCTTGGAG CAGTGCTGCA ACCCGCTCCC AAAGGGAATC 
    ATTCTCAACC GGCTAGGTGA AGATGCCGCA GTTTCAAATA TGATTAACAA TTTTTGCGAA 
    AATATTGGTG ACAATTATAC TTGTTTTGGT GATATCTCTC GAGAGATAAA TGCCCACTAC 
    GAGAGCCGCT TTAACCATAT GAAAGCAACC TTGAAACTCG TATATTTCCC CAATATTTGG 
    AGAGGTACGG CAACAGTTGC AGCTGCTATC CTCCTGATCC TCACTTTGAT ACAGACTATA 
    AAATCATTCT TTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0017s05270g ( XM_024588811.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024444579.1 Populus trichocarpa UPF0481 protein At3g47200 (LOC18106859), mRNA.
    Price & Availability↑
    CloneID OPa446440
    Clone ID Related Accession (Same CDS sequence) XM_024588811.1
    Accession Version XM_024588811.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1542bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product UPF0481 protein At3g47200
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037301.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGCATTTGG GTAGACAAGG CAAGAGACTT GGAGAGAGAG AGAGAGAGAG AGAGAGAGAG 
    GTGCTGCAAT ATCTATATAG GAAAGAGGCT CGCTGCTTGG GACCCTATAT TATATACAGA 
    CACAGTCCTC TGATCTCCGT CCTCAGCCTG GAAAAGGATA AGTTTACTGC AAGTGCTTCG 
    AACATGGGAG AGGACAAGGC AAGTACTCCA AACAAGGGAA AAGATATTGA TGTGGGAAGT 
    GCTTCAGGCA TTGAGATGGC TACAAATCCC GATTATTATC AAAATAGAGA GAGAGAGAAA 
    GCTACAGATA TTTTGGCAAA GCTGGATTCT GAGGTGAAAC AGATGTCCTT TAAACGGAAC 
    GGTTCCGAGT GCTGCATCTA CAGGGTGCCC GAACCGCTTC GAAACGTAAA TTTGGAAGCC 
    TACTCTCCAC TACTGATTTC AATAGGTCCT CTTAACCGCC AAAATATAAG ACTAGAGGCC 
    ATGGAAAAGG AGAAACTGAA ATATTTCAAA AAGCTTACTG AACGGGATGG GATGGATAAG 
    AAGAAAATTA TTGATATTTT GATCAGCATT GAGAACCAAG AAGAGCGTCT CCGACACTGT 
    TATTCAGAGA AATTCAATTT AATCAAGAGC CGTGATTTCG TAAAGATGAT CCTGCTGGAT 
    GCTGTCTTCA TCATTCAGTT TTTGTTGGAG TCAAAGGATC ATGATAACGA TCCTAAGAAT 
    TTTGAGCCCA GGATGACATT TGACATCCGA GAAGACTTGA TGCTACTTGA AAACCAACTG 
    CCATTCTTCA TTATTCAGGA AATATATGAC CAGGTCAATC CCCCTAGCCA GGATGGTACA 
    ACCATTCCTT TTCTTGATCT TGCAAAGTGT CATTTTGGAA AGCACAAGTT TTCACAGGGG 
    GCAGAAACCA GCCCGAGTGT AAAGGGAAGC AGGCATTTCA CTGATTTACT AAGGAATTTG 
    ATGTTGAATG GAGCCATTCA GCGAAGTTAT ATTTTTTATC CTATCAAGCT GAAATATAGT 
    GCGGTCATGC TTCGCAAGGC AGGAGTGAAG TTTCAGGTCA CCCAAGACAA ATGTTTGGTC 
    AACATAACAT TTGACAAAGG AGTGTTGAAA ATTCCACAGT TGGAAGTTGA TCACAGCTTC 
    GAACGTCTTG TACGAAATAT CATGGCCTTG GAGCAGTGCT GCAACCCGCG TGAAGCTTAC 
    GTGTGCAGCT ACATTAAGTT TATGGCCCAT CTTATCGACA GTGCAGAAGA CGTGGGTTTG 
    CTAGTCCGAA AGGGAATCAT TCTCCACGGG CTAGGCGACG ATGCCGCAGT TTCAAATATG 
    ATTAACCATT TTTGCAAAAA TATTGGTGAC AATTATACTT GTTTTGGTGA TATCTCTAGA 
    AATATAAGTC GCCACTATGA GAACCGCTTT AACCATACGA AGGCAACCTT GAAACTAATA 
    TATTTCCCCA ATATTTGGAG AGGTACGGCA ACTGTTGCAG CAGCTATCCT GCTGATCCTC 
    ACTTTCATAC AGACTATAGC TTCCGTAAAA TGGGCATTCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024444579.1
    CDS159..1700
    Translation

    Target ORF information:

    RefSeq Version XM_024588811.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa UPF0481 protein At3g47200 (LOC18106859), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024588811.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGCATTTGG GTAGACAAGG CAAGAGACTT GGAGAGAGAG AGAGAGAGAG AGAGAGAGAG 
    GTGCTGCAAT ATCTATATAG GAAAGAGGCT CGCTGCTTGG GACCCTATAT TATATACAGA 
    CACAGTCCTC TGATCTCCGT CCTCAGCCTG GAAAAGGATA AGTTTACTGC AAGTGCTTCG 
    AACATGGGAG AGGACAAGGC AAGTACTCCA AACAAGGGAA AAGATATTGA TGTGGGAAGT 
    GCTTCAGGCA TTGAGATGGC TACAAATCCC GATTATTATC AAAATAGAGA GAGAGAGAAA 
    GCTACAGATA TTTTGGCAAA GCTGGATTCT GAGGTGAAAC AGATGTCCTT TAAACGGAAC 
    GGTTCCGAGT GCTGCATCTA CAGGGTGCCC GAACCGCTTC GAAACGTAAA TTTGGAAGCC 
    TACTCTCCAC TACTGATTTC AATAGGTCCT CTTAACCGCC AAAATATAAG ACTAGAGGCC 
    ATGGAAAAGG AGAAACTGAA ATATTTCAAA AAGCTTACTG AACGGGATGG GATGGATAAG 
    AAGAAAATTA TTGATATTTT GATCAGCATT GAGAACCAAG AAGAGCGTCT CCGACACTGT 
    TATTCAGAGA AATTCAATTT AATCAAGAGC CGTGATTTCG TAAAGATGAT CCTGCTGGAT 
    GCTGTCTTCA TCATTCAGTT TTTGTTGGAG TCAAAGGATC ATGATAACGA TCCTAAGAAT 
    TTTGAGCCCA GGATGACATT TGACATCCGA GAAGACTTGA TGCTACTTGA AAACCAACTG 
    CCATTCTTCA TTATTCAGGA AATATATGAC CAGGTCAATC CCCCTAGCCA GGATGGTACA 
    ACCATTCCTT TTCTTGATCT TGCAAAGTGT CATTTTGGAA AGCACAAGTT TTCACAGGGG 
    GCAGAAACCA GCCCGAGTGT AAAGGGAAGC AGGCATTTCA CTGATTTACT AAGGAATTTG 
    ATGTTGAATG GAGCCATTCA GCGAAGTTAT ATTTTTTATC CTATCAAGCT GAAATATAGT 
    GCGGTCATGC TTCGCAAGGC AGGAGTGAAG TTTCAGGTCA CCCAAGACAA ATGTTTGGTC 
    AACATAACAT TTGACAAAGG AGTGTTGAAA ATTCCACAGT TGGAAGTTGA TCACAGCTTC 
    GAACGTCTTG TACGAAATAT CATGGCCTTG GAGCAGTGCT GCAACCCGCG TGAAGCTTAC 
    GTGTGCAGCT ACATTAAGTT TATGGCCCAT CTTATCGACA GTGCAGAAGA CGTGGGTTTG 
    CTAGTCCGAA AGGGAATCAT TCTCCACGGG CTAGGCGACG ATGCCGCAGT TTCAAATATG 
    ATTAACCATT TTTGCAAAAA TATTGGTGAC AATTATACTT GTTTTGGTGA TATCTCTAGA 
    AATATAAGTC GCCACTATGA GAACCGCTTT AACCATACGA AGGCAACCTT GAAACTAATA 
    TATTTCCCCA ATATTTGGAG AGGTACGGCA ACTGTTGCAG CAGCTATCCT GCTGATCCTC 
    ACTTTCATAC AGACTATAGC TTCCGTAAAA TGGGCATTCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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