LOC105777908 cDNA ORF clone, Gossypium raimondii

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105777908
Entrez Gene ID	105777908
Full Name	tyrosyl-DNA phosphodiesterase 1
Gene Type	protein-coding
Organism	Gossypium raimondii

mRNA and Protein(s)

mRNA	Protein	Name
XM_012601419.1	XP_012456873.1	tyrosyl-DNA phosphodiesterase 1

Pathways from BioSystems
Gene Ontology

The following LOC105777908 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105777908 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OGo194950	XM_012601419.1 Latest version!	Gossypium raimondii tyrosyl-DNA phosphodiesterase 1 (LOC105777908), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105777908 ( XM_012601419.1 ) cDNA ORF clone, Gossypium raimondii -> XP_012456873.1 Gossypium raimondii tyrosyl-DNA phosphodiesterase 1 (LOC105777908), mRNA.

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CloneID	OGo194950
Clone ID Related Accession (Same CDS sequence)	XM_012601419.1
Accession Version	XM_012601419.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1938bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-05-21
Organism	Gossypium raimondii
Product	tyrosyl-DNA phosphodiesterase 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012160878.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gossypium raimondii Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTCGAT CTCAGATTGG ATACTTGGTT GCTGTAAATA AGAATCTCGA AGAGGTGGCT 
TCACTCCCTA AGCTCCCCCT CTTTCACGGC CCTAATTTCA TCGGCCGGAA CGATGTTTCC 
GTTCCCGATA AGAGACTCAG CCGCAAACAC ATTGCTTTAA CCACCTTCCC TGACGGCTCC 
GCCGATTTAC TCGTCGAAGG GACTAACCCA GTGGTCATTA GGTCCGGCGA GCTGAGGAAG 
AAGCTCGTTT CCCTCGAGAA AACAGCTATT AACAATGGTG ATATCATAGA GCTGATTCCA 
GGTAATCACT TGTTCAAATA TGTATCAGCT TCAACTGGTG AAAAAAAAAG AAATTTTAGT 
GAAGCTAATA GCAATGAACA AAGCCCGAAA CTTTCTGGAA AGAAAATACG AAATCAAGGT 
CCCAAAAATG AAGAAACTTC AGCTGACAAA TTGAAGGCAG AGGACAAAGA CAGTAATAAA 
GAGCAAAACT GTGTCGAGGC GATTCGGGGT TTTCACGTTT CAAATGATAA GTTACCGCAT 
ACATTTCGAT TATTGAAAGT TCAAGGCTTG CCAACATGGG CAAATACTAA TTCTGTTTCT 
ATAGGGGATG CGATTGAGGG TGATGTTCTA CTCGCGGTCC TCTCAAATTA TATGGTAGAT 
ATTGATTGGT TAATATCAGC ATGTCCGAAA CTTGCAAAAA TTCCCAATGT ATTGGTTATT 
CATGGAGAAG GTGATAGCAG GCTGGATCTT ATGAAGAGAA GCAAGCCTAC CAATTGGATT 
CTGCACAAGC CCCCGTTACC TATTTCATTT GGGACACACC ATTCGAAGGC AATGCTCCTT 
GTGTATCCTC AAGGAGTGAG AGTTATTGTT CATACAGCGA ACTTAATATA CGTTGACTGG 
AATAATAAAA GTCAAGGTTT ATGGATGCAA GATTTCCCTT GGAAAGATCA AAGTAACTCT 
ACGAAAGGAT GTGGATTTGA AAATGACTTG GTTGACTATC TCAGCACATT GAAGTGGCCC 
GAGTTCACTG CTAATTTACC ATCTCTGGGA AACTTCAACA TCAATTCCGC CTTCTTCAAG 
AAGTTTGATT ACAGTGAGTC AAAGGTTCGA TTAATTGCAT CTGTCCCTGG ATATCATACG 
GGTTCCAATC TGAAAAAATG GGGCCATATG AAGCTGCGAA CTGTTCTCCA AGACTGTGTT 
TTTGATAAAG AGTTTCGGAG ATCTCCTCTA GTTTATCAGT TCTCCTCCCT CGGTTCATTG 
GACGAGAAAT GGATGGCTGA GCTAGCATCG TCAATGTCAT CAGGCTATTC AGAAGATAAA 
ACACCCCTCG GTTTAGGGGA GTCATTAATA ATATGGCCCA CCGTTGAAGA TGTCAGATGC 
TCCTTAGAGG GCTATGCAGC TGGAAATGCA ATTCCGAGTC CACTTAAGAA TGTCGAAAAA 
GGATTCTTGA AGAAGTATTG GGCAAAGTGG AAGGCAAGCC ATACCGGGCG CTGTCGTGCA 
ATGCCGCATA TCAAGACATA TACACGCTAC AAGGGACAAA ATCTGGTTTG GTTCTTACTA 
ACTTCAGCAA ATCTTAGCAA AGCTGCCTGG GGAGCCTTAC AGAAGAACAA TTCTCAGTTG 
ATGATCCGTT CTTACGAGCT GGGTGTGCTA TTTTTACCAT CTCGTATCAA AGTAGACGGT 
CCCAGTCGTG AATTTTCCTG CACTGATAAG GGAGGTTCAT CAAAGGGTAG CGGTAAATCA 
AACTCACCCG GAAATCCCGT ACCAGCAATG ACCAAGCTAG TTACACTTGC TTGGCAAGGA 
ACCAAGACAT CCGAAGTAAT TCAATTGCCT GTACCATACG AACTCCCTCC TGAACCATAT 
TCATCCCAAG ATATTCCATG GTCATGGGAC CGGCGATACA GTAAGAAGGA TGTTTATGGT 
CAAGTTTGGC CTCGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012456873.1
CDS	140..2077
Translation	MPRSQIGYLVAVNKNLEEVASLPKLPLFHGPNFIGRNDVSVPDKRLSRKHIALTTFPDGSADLLVEGTNPVVIRSGELRKKLVSLEKTAINNGDIIELIPGNHLFKYVSASTGEKKRNFSEANSNEQSPKLSGKKIRNQGPKNEETSADKLKAEDKDSNKEQNCVEAIRGFHVSNDKLPHTFRLLKVQGLPTWANTNSVSIGDAIEGDVLLAVLSNYMVDIDWLISACPKLAKIPNVLVIHGEGDSRLDLMKRSKPTNWILHKPPLPISFGTHHSKAMLLVYPQGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKDQSNSTKGCGFENDLVDYLSTLKWPEFTANLPSLGNFNINSAFFKKFDYSESKVRLIASVPGYHTGSNLKKWGHMKLRTVLQDCVFDKEFRRSPLVYQFSSLGSLDEKWMAELASSMSSGYSEDKTPLGLGESLIIWPTVEDVRCSLEGYAAGNAIPSPLKNVEKGFLKKYWAKWKASHTGRCRAMPHIKTYTRYKGQNLVWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPSRIKVDGPSREFSCTDKGGSSKGSGKSNSPGNPVPAMTKLVTLAWQGTKTSEVIQLPVPYELPPEPYSSQDIPWSWDRRYSKKDVYGQVWPR

Target ORF information:

RefSeq Version	XM_012601419.1
Organism	Gossypium raimondii
Definition	Gossypium raimondii tyrosyl-DNA phosphodiesterase 1 (LOC105777908), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012601419.1

ORF Insert Sequence:

ATGCCTCGAT CTCAGATTGG ATACTTGGTT GCTGTAAATA AGAATCTCGA AGAGGTGGCT 
TCACTCCCTA AGCTCCCCCT CTTTCACGGC CCTAATTTCA TCGGCCGGAA CGATGTTTCC 
GTTCCCGATA AGAGACTCAG CCGCAAACAC ATTGCTTTAA CCACCTTCCC TGACGGCTCC 
GCCGATTTAC TCGTCGAAGG GACTAACCCA GTGGTCATTA GGTCCGGCGA GCTGAGGAAG 
AAGCTCGTTT CCCTCGAGAA AACAGCTATT AACAATGGTG ATATCATAGA GCTGATTCCA 
GGTAATCACT TGTTCAAATA TGTATCAGCT TCAACTGGTG AAAAAAAAAG AAATTTTAGT 
GAAGCTAATA GCAATGAACA AAGCCCGAAA CTTTCTGGAA AGAAAATACG AAATCAAGGT 
CCCAAAAATG AAGAAACTTC AGCTGACAAA TTGAAGGCAG AGGACAAAGA CAGTAATAAA 
GAGCAAAACT GTGTCGAGGC GATTCGGGGT TTTCACGTTT CAAATGATAA GTTACCGCAT 
ACATTTCGAT TATTGAAAGT TCAAGGCTTG CCAACATGGG CAAATACTAA TTCTGTTTCT 
ATAGGGGATG CGATTGAGGG TGATGTTCTA CTCGCGGTCC TCTCAAATTA TATGGTAGAT 
ATTGATTGGT TAATATCAGC ATGTCCGAAA CTTGCAAAAA TTCCCAATGT ATTGGTTATT 
CATGGAGAAG GTGATAGCAG GCTGGATCTT ATGAAGAGAA GCAAGCCTAC CAATTGGATT 
CTGCACAAGC CCCCGTTACC TATTTCATTT GGGACACACC ATTCGAAGGC AATGCTCCTT 
GTGTATCCTC AAGGAGTGAG AGTTATTGTT CATACAGCGA ACTTAATATA CGTTGACTGG 
AATAATAAAA GTCAAGGTTT ATGGATGCAA GATTTCCCTT GGAAAGATCA AAGTAACTCT 
ACGAAAGGAT GTGGATTTGA AAATGACTTG GTTGACTATC TCAGCACATT GAAGTGGCCC 
GAGTTCACTG CTAATTTACC ATCTCTGGGA AACTTCAACA TCAATTCCGC CTTCTTCAAG 
AAGTTTGATT ACAGTGAGTC AAAGGTTCGA TTAATTGCAT CTGTCCCTGG ATATCATACG 
GGTTCCAATC TGAAAAAATG GGGCCATATG AAGCTGCGAA CTGTTCTCCA AGACTGTGTT 
TTTGATAAAG AGTTTCGGAG ATCTCCTCTA GTTTATCAGT TCTCCTCCCT CGGTTCATTG 
GACGAGAAAT GGATGGCTGA GCTAGCATCG TCAATGTCAT CAGGCTATTC AGAAGATAAA 
ACACCCCTCG GTTTAGGGGA GTCATTAATA ATATGGCCCA CCGTTGAAGA TGTCAGATGC 
TCCTTAGAGG GCTATGCAGC TGGAAATGCA ATTCCGAGTC CACTTAAGAA TGTCGAAAAA 
GGATTCTTGA AGAAGTATTG GGCAAAGTGG AAGGCAAGCC ATACCGGGCG CTGTCGTGCA 
ATGCCGCATA TCAAGACATA TACACGCTAC AAGGGACAAA ATCTGGTTTG GTTCTTACTA 
ACTTCAGCAA ATCTTAGCAA AGCTGCCTGG GGAGCCTTAC AGAAGAACAA TTCTCAGTTG 
ATGATCCGTT CTTACGAGCT GGGTGTGCTA TTTTTACCAT CTCGTATCAA AGTAGACGGT 
CCCAGTCGTG AATTTTCCTG CACTGATAAG GGAGGTTCAT CAAAGGGTAG CGGTAAATCA 
AACTCACCCG GAAATCCCGT ACCAGCAATG ACCAAGCTAG TTACACTTGC TTGGCAAGGA 
ACCAAGACAT CCGAAGTAAT TCAATTGCCT GTACCATACG AACTCCCTCC TGAACCATAT 
TCATCCCAAG ATATTCCATG GTCATGGGAC CGGCGATACA GTAAGAAGGA TGTTTATGGT 
CAAGTTTGGC CTCGATAA