sdc3 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	sdc3
Entrez Gene ID	100134998
Full Name	syndecan 3
Synonyms	N-syndecan,Xsyn-3,sdcn,synd3
General protein information	Preferred Names syndecan 3 Names syndecan-3
Gene Type	protein-coding
Organism	Xenopus tropicalis(tropical clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002938828.4	XP_002938874.1	syndecan-3
XM_002938828.5	XP_002938874.1	syndecan-3

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Sdc3	NP_035650.2
Rattus norvegicus (Norway rat)	Sdc3	NP_446345.3
Gallus gallus (chicken)	SDC3	NP_990714.1
Xenopus tropicalis (tropical clawed frog)	sdc3	XP_002938874.1
Homo sapiens (human)	SDC3	NP_055469.3
Pan troglodytes (chimpanzee)	SDC3	XP_001149044.2
	SDC3	XP_001092729.2
Canis lupus familiaris (dog)	SDC3	XP_005617740.1
Bos taurus (cattle)	SDC3	NP_001193460.1

Gene Ontology

The following sdc3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sdc3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OXa05443	XM_002938828.5 Latest version!	Xenopus tropicalis syndecan 3 (sdc3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
View Old Accession Versions >>
OXa05443	XM_002938828.4	Xenopus tropicalis syndecan 3 (sdc3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

sdc3 ( XM_002938828.4 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_002938874.1 Xenopus tropicalis syndecan 3 (sdc3), mRNA.

Price & Availability↑

CloneID	OXa05443
Clone ID Related Accession (Same CDS sequence)	XM_002938828.4 , XM_002938828.5
Accession Version	XM_002938828.4	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	syndecan-3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_002938828.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTATTTGG CCTTTGGGAT TATACAAGGG GCTGGGCTGC TCTTCATCAT CACACAATCT 
GCTCTGGCTG AAAGGTGGAG AAGTGAGTTT GAAGATGAGC GACCGGTTGA TCTGGAAAGC 
TCTGGGGATG ATGACTTGTT TGAAGATGAG GACATGGATG ATGTATACTC TGGTTCAGGA 
TCAGGCAATT TTGAACTGGA ATCGGGCTTG GATTTGGGGT TCAGGTTTAC AACAAAGACT 
CCCATTTCTC CTCCAACAGT AACAGCATTA AAACCTGCTC CCACTGACGA TTTTCTCCCT 
CCAGTACAAA GCACCTGGGT CCCTCCAACA ACCCAGGCCT CTGTAGTACA CCGGCACAAT 
CCATGGGTTC CACCAGAAGC TCCAGATACA CCGTCTTTGC CAGCTGCCCC CACACCCACC 
ATTCCTTCCA AACAAGCAGC AACTACGGAA GCTACTGCTA CTGAAACAGT GAGGACAACT 
GAGGTACGTA GGTTGCAGCC TGTTGTGGTG GTTTCCACAG AGATAATGGC CACACCAAGC 
TCAACTGATA AAGACATGTT TACGTGGGAG GCTACTGATG AACAGGAGGT GACAAGTTTT 
AACACAGAAA GTGGCAGGGT CTGGCCTACA GAAGACTGGA GGACAAGTGT AGAGGACATC 
AAGGTGGAAG AAACAGAAAA AGTGTCCCCA ACACTGCAAC CTCAGACTGA AAGTTGGGAG 
GTCACAGCTG TTACTTCACG TGATAGCGAC TTTGAAATTC CAATCAGTGG TGGACCAAGT 
GGTGACTTTG AGATCCAAGA GGAAGATGTT GTACCCCAGA CAGAGCCCCC AACATTACCA 
GACTTGGGCA ATGAGGTCTT GCTTCCTGCA ACAGCACCAC CTGACCTTGC CCGAGGAAGG 
AAGCCTGATA CTGGCCTAAT AGATAACACA ATAGATTCTG GAAACACTTT GGCACAAATG 
CCTCAGAAAA ATATTCTAGA GAGAAGAGAG GTATTAATAG CGGTGATAGT TGGGGGTGTG 
GTTGGAGCTC TGTTTGCCGC CTTCCTGGTG ATGCTGCTGA TTTATCGGAT GAAAAAGAAA 
GATGAAGGAA GTTACGCTCT GGAGGAACCC AAACCAGCCA GTGTCTCTTA CCAGAAACCA 
GAAACTCATG AGGAATTTTA CGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002938874.1
CDS	411..1577
Translation	MYLAFGIIQGAGLLFIITQSALAERWRSEFEDERPVDLESSGDDDLFEDEDMDDVYSGSGSGNFELESGLDLGFRFTTKTPISPPTVTALKPAPTDDFLPPVQSTWVPPTTQASVVHRHNPWVPPEAPDTPSLPAAPTPTIPSKQAATTEATATETVRTTEVRRLQPVVVVSTEIMATPSSTDKDMFTWEATDEQEVTSFNTESGRVWPTEDWRTSVEDIKVEETEKVSPTLQPQTESWEVTAVTSRDSDFEIPISGGPSGDFEIQEEDVVPQTEPPTLPDLGNEVLLPATAPPDLARGRKPDTGLIDNTIDSGNTLAQMPQKNILERREVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYALEEPKPASVSYQKPETHEEFYA

Target ORF information:

RefSeq Version	XM_002938828.4
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis syndecan 3 (sdc3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002938828.4

ORF Insert Sequence:

ATGTATTTGG CCTTTGGGAT TATACAAGGG GCTGGGCTGC TCTTCATCAT CACACAATCT 
GCTCTGGCTG AAAGGTGGAG AAGTGAGTTT GAAGATGAGC GACCGGTTGA TCTGGAAAGC 
TCTGGGGATG ATGACTTGTT TGAAGATGAG GACATGGATG ATGTATACTC TGGTTCAGGA 
TCAGGCAATT TTGAACTGGA ATCGGGCTTG GATTTGGGGT TCAGGTTTAC AACAAAGACT 
CCCATTTCTC CTCCAACAGT AACAGCATTA AAACCTGCTC CCACTGACGA TTTTCTCCCT 
CCAGTACAAA GCACCTGGGT CCCTCCAACA ACCCAGGCCT CTGTAGTACA CCGGCACAAT 
CCATGGGTTC CACCAGAAGC TCCAGATACA CCGTCTTTGC CAGCTGCCCC CACACCCACC 
ATTCCTTCCA AACAAGCAGC AACTACGGAA GCTACTGCTA CTGAAACAGT GAGGACAACT 
GAGGTACGTA GGTTGCAGCC TGTTGTGGTG GTTTCCACAG AGATAATGGC CACACCAAGC 
TCAACTGATA AAGACATGTT TACGTGGGAG GCTACTGATG AACAGGAGGT GACAAGTTTT 
AACACAGAAA GTGGCAGGGT CTGGCCTACA GAAGACTGGA GGACAAGTGT AGAGGACATC 
AAGGTGGAAG AAACAGAAAA AGTGTCCCCA ACACTGCAAC CTCAGACTGA AAGTTGGGAG 
GTCACAGCTG TTACTTCACG TGATAGCGAC TTTGAAATTC CAATCAGTGG TGGACCAAGT 
GGTGACTTTG AGATCCAAGA GGAAGATGTT GTACCCCAGA CAGAGCCCCC AACATTACCA 
GACTTGGGCA ATGAGGTCTT GCTTCCTGCA ACAGCACCAC CTGACCTTGC CCGAGGAAGG 
AAGCCTGATA CTGGCCTAAT AGATAACACA ATAGATTCTG GAAACACTTT GGCACAAATG 
CCTCAGAAAA ATATTCTAGA GAGAAGAGAG GTATTAATAG CGGTGATAGT TGGGGGTGTG 
GTTGGAGCTC TGTTTGCCGC CTTCCTGGTG ATGCTGCTGA TTTATCGGAT GAAAAAGAAA 
GATGAAGGAA GTTACGCTCT GGAGGAACCC AAACCAGCCA GTGTCTCTTA CCAGAAACCA 
GAAACTCATG AGGAATTTTA CGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

sdc3 ( XM_002938828.5 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_002938874.1 Xenopus tropicalis syndecan 3 (sdc3), mRNA.

Price & Availability↑

CloneID	OXa05443
Clone ID Related Accession (Same CDS sequence)	XM_002938828.4 , XM_002938828.5
Accession Version	XM_002938828.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-17
Organism	Xenopus tropicalis(tropical clawed frog)
Product	syndecan-3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_002938828.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTATTTGG CCTTTGGGAT TATACAAGGG GCTGGGCTGC TCTTCATCAT CACACAATCT 
GCTCTGGCTG AAAGGTGGAG AAGTGAGTTT GAAGATGAGC GACCGGTTGA TCTGGAAAGC 
TCTGGGGATG ATGACTTGTT TGAAGATGAG GACATGGATG ATGTATACTC TGGTTCAGGA 
TCAGGCAATT TTGAACTGGA ATCGGGCTTG GATTTGGGGT TCAGGTTTAC AACAAAGACT 
CCCATTTCTC CTCCAACAGT AACAGCATTA AAACCTGCTC CCACTGACGA TTTTCTCCCT 
CCAGTACAAA GCACCTGGGT CCCTCCAACA ACCCAGGCCT CTGTAGTACA CCGGCACAAT 
CCATGGGTTC CACCAGAAGC TCCAGATACA CCGTCTTTGC CAGCTGCCCC CACACCCACC 
ATTCCTTCCA AACAAGCAGC AACTACGGAA GCTACTGCTA CTGAAACAGT GAGGACAACT 
GAGGTACGTA GGTTGCAGCC TGTTGTGGTG GTTTCCACAG AGATAATGGC CACACCAAGC 
TCAACTGATA AAGACATGTT TACGTGGGAG GCTACTGATG AACAGGAGGT GACAAGTTTT 
AACACAGAAA GTGGCAGGGT CTGGCCTACA GAAGACTGGA GGACAAGTGT AGAGGACATC 
AAGGTGGAAG AAACAGAAAA AGTGTCCCCA ACACTGCAAC CTCAGACTGA AAGTTGGGAG 
GTCACAGCTG TTACTTCACG TGATAGCGAC TTTGAAATTC CAATCAGTGG TGGACCAAGT 
GGTGACTTTG AGATCCAAGA GGAAGATGTT GTACCCCAGA CAGAGCCCCC AACATTACCA 
GACTTGGGCA ATGAGGTCTT GCTTCCTGCA ACAGCACCAC CTGACCTTGC CCGAGGAAGG 
AAGCCTGATA CTGGCCTAAT AGATAACACA ATAGATTCTG GAAACACTTT GGCACAAATG 
CCTCAGAAAA ATATTCTAGA GAGAAGAGAG GTATTAATAG CGGTGATAGT TGGGGGTGTG 
GTTGGAGCTC TGTTTGCCGC CTTCCTGGTG ATGCTGCTGA TTTATCGGAT GAAAAAGAAA 
GATGAAGGAA GTTACGCTCT GGAGGAACCC AAACCAGCCA GTGTCTCTTA CCAGAAACCA 
GAAACTCATG AGGAATTTTA CGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002938874.1
CDS	398..1564
Translation	MYLAFGIIQGAGLLFIITQSALAERWRSEFEDERPVDLESSGDDDLFEDEDMDDVYSGSGSGNFELESGLDLGFRFTTKTPISPPTVTALKPAPTDDFLPPVQSTWVPPTTQASVVHRHNPWVPPEAPDTPSLPAAPTPTIPSKQAATTEATATETVRTTEVRRLQPVVVVSTEIMATPSSTDKDMFTWEATDEQEVTSFNTESGRVWPTEDWRTSVEDIKVEETEKVSPTLQPQTESWEVTAVTSRDSDFEIPISGGPSGDFEIQEEDVVPQTEPPTLPDLGNEVLLPATAPPDLARGRKPDTGLIDNTIDSGNTLAQMPQKNILERREVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYALEEPKPASVSYQKPETHEEFYA

Target ORF information:

RefSeq Version	XM_002938828.5
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis syndecan 3 (sdc3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002938828.5

ORF Insert Sequence:

ATGTATTTGG CCTTTGGGAT TATACAAGGG GCTGGGCTGC TCTTCATCAT CACACAATCT 
GCTCTGGCTG AAAGGTGGAG AAGTGAGTTT GAAGATGAGC GACCGGTTGA TCTGGAAAGC 
TCTGGGGATG ATGACTTGTT TGAAGATGAG GACATGGATG ATGTATACTC TGGTTCAGGA 
TCAGGCAATT TTGAACTGGA ATCGGGCTTG GATTTGGGGT TCAGGTTTAC AACAAAGACT 
CCCATTTCTC CTCCAACAGT AACAGCATTA AAACCTGCTC CCACTGACGA TTTTCTCCCT 
CCAGTACAAA GCACCTGGGT CCCTCCAACA ACCCAGGCCT CTGTAGTACA CCGGCACAAT 
CCATGGGTTC CACCAGAAGC TCCAGATACA CCGTCTTTGC CAGCTGCCCC CACACCCACC 
ATTCCTTCCA AACAAGCAGC AACTACGGAA GCTACTGCTA CTGAAACAGT GAGGACAACT 
GAGGTACGTA GGTTGCAGCC TGTTGTGGTG GTTTCCACAG AGATAATGGC CACACCAAGC 
TCAACTGATA AAGACATGTT TACGTGGGAG GCTACTGATG AACAGGAGGT GACAAGTTTT 
AACACAGAAA GTGGCAGGGT CTGGCCTACA GAAGACTGGA GGACAAGTGT AGAGGACATC 
AAGGTGGAAG AAACAGAAAA AGTGTCCCCA ACACTGCAAC CTCAGACTGA AAGTTGGGAG 
GTCACAGCTG TTACTTCACG TGATAGCGAC TTTGAAATTC CAATCAGTGG TGGACCAAGT 
GGTGACTTTG AGATCCAAGA GGAAGATGTT GTACCCCAGA CAGAGCCCCC AACATTACCA 
GACTTGGGCA ATGAGGTCTT GCTTCCTGCA ACAGCACCAC CTGACCTTGC CCGAGGAAGG 
AAGCCTGATA CTGGCCTAAT AGATAACACA ATAGATTCTG GAAACACTTT GGCACAAATG 
CCTCAGAAAA ATATTCTAGA GAGAAGAGAG GTATTAATAG CGGTGATAGT TGGGGGTGTG 
GTTGGAGCTC TGTTTGCCGC CTTCCTGGTG ATGCTGCTGA TTTATCGGAT GAAAAAGAAA 
GATGAAGGAA GTTACGCTCT GGAGGAACCC AAACCAGCCA GTGTCTCTTA CCAGAAACCA 
GAAACTCATG AGGAATTTTA CGCATAG