YOD1 cDNA ORF clone, Thamnophis sirtalis

Gene
Clones
gRNAs

Summary

Gene Symbol	YOD1
Entrez Gene ID	106540490
Full Name	YOD1 deubiquitinase
Gene Type	protein-coding
Organism	Thamnophis sirtalis

mRNA and Protein(s)

mRNA	Protein	Name
XM_014055607.1	XP_013911082.1	ubiquitin thioesterase OTU1 isoform X2
XM_014055606.1	XP_013911081.1	ubiquitin thioesterase OTU1 isoform X1

Pathways from BioSystems
Gene Ontology

The following YOD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the YOD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OTh16450	XM_014055606.1 Latest version!	Thamnophis sirtalis YOD1 deubiquitinase (YOD1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OTh16451	XM_014055607.1 Latest version!	Thamnophis sirtalis YOD1 deubiquitinase (YOD1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

YOD1 ( XM_014055606.1 ) cDNA ORF clone, Thamnophis sirtalis -> XP_013911081.1 Thamnophis sirtalis YOD1 deubiquitinase (YOD1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OTh16450
Clone ID Related Accession (Same CDS sequence)	XM_014055606.1
Accession Version	XM_014055606.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 915bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-10
Organism	Thamnophis sirtalis
Product	ubiquitin thioesterase OTU1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_013657969.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Thamnophis sirtalis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTACGGC TGCGTTGTAA AGCGCGGAAT GGCTCCTTTC CGCTTCCCGG CCTCACGGCA 
CATTCCCGTC TACACGAACT CCAGGGCGTG ATCGCTGCCC TCACCGGTGT CCCCATCCAG 
GCCCAGCGCC TGCTGCTCGG CTTCCCCCCC TCGTGCCTCG ACCTCAGTGA TGAAGAGCAG 
CGCCTCGGAG AGCTGGGCAT TCATTCCGGT GATACTCTAA TAGTTGAAGA AGATACAACC 
AAGCCCAAGA CTGATTCATC TATAGTTACA AAGCGGACTG TTTCTAATTC GGTTAGAGAA 
GCTGTACCTG TGCTTGCCCG AAAGGTTGTT CCAGCTGACA ACTCATGTCT TTTTACCAGC 
ATATATTATG TAGTAGAAGG TGGGGTTTAT GAACCAGGCT GTGCCCCAGA AATGAGAAAT 
CTCATTGCCC AAATTGTAGC AAGCGACTTG GAATCCTATA GTGAGGCAGT CCTAGGAAAA 
AGTAATCAGG AATATTGTGA CTGGATCAGA AGAGAAGATA CATGGGGAGG TGCAATTGAG 
GTTTCTATAT TATCTAAATT CTATCAGTGT GAAATTTGTG TAGTTGATAC CCAGACAGTC 
AGAATTGATC GTTTTGGGGA AGATGCTGGC TATGCTAAAC GGGTGCTTTT AATTTATGAT 
GGTATTCACT ATGATCCACT TGAACGTAAA ATCCCCAACT CAGACATTCC TCCTCAGACA 
ATTTTTTCCA CAAATGATGA TGTTGTCCTT GCACAGGCTT TGGAATTAGC AGAGGAAGCC 
AGAAGAAAAA GACAGTTTAC TGATGTAAAT CGGTTTACAT TGAGATGTAT GGTTTGTCAG 
AAAGGATTAA CAGGGCAAGT GGAAGCCAGA GAACATGCCA AGGAGACTGG ACACACCAAC 
TTTGGAGAAG TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_013911081.1
CDS	48..962
Translation	MLRLRCKARNGSFPLPGLTAHSRLHELQGVIAALTGVPIQAQRLLLGFPPSCLDLSDEEQRLGELGIHSGDTLIVEEDTTKPKTDSSIVTKRTVSNSVREAVPVLARKVVPADNSCLFTSIYYVVEGGVYEPGCAPEMRNLIAQIVASDLESYSEAVLGKSNQEYCDWIRREDTWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDAGYAKRVLLIYDGIHYDPLERKIPNSDIPPQTIFSTNDDVVLAQALELAEEARRKRQFTDVNRFTLRCMVCQKGLTGQVEAREHAKETGHTNFGEV

Target ORF information:

RefSeq Version	XM_014055606.1
Organism	Thamnophis sirtalis
Definition	Thamnophis sirtalis YOD1 deubiquitinase (YOD1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014055606.1

ORF Insert Sequence:

ATGTTACGGC TGCGTTGTAA AGCGCGGAAT GGCTCCTTTC CGCTTCCCGG CCTCACGGCA 
CATTCCCGTC TACACGAACT CCAGGGCGTG ATCGCTGCCC TCACCGGTGT CCCCATCCAG 
GCCCAGCGCC TGCTGCTCGG CTTCCCCCCC TCGTGCCTCG ACCTCAGTGA TGAAGAGCAG 
CGCCTCGGAG AGCTGGGCAT TCATTCCGGT GATACTCTAA TAGTTGAAGA AGATACAACC 
AAGCCCAAGA CTGATTCATC TATAGTTACA AAGCGGACTG TTTCTAATTC GGTTAGAGAA 
GCTGTACCTG TGCTTGCCCG AAAGGTTGTT CCAGCTGACA ACTCATGTCT TTTTACCAGC 
ATATATTATG TAGTAGAAGG TGGGGTTTAT GAACCAGGCT GTGCCCCAGA AATGAGAAAT 
CTCATTGCCC AAATTGTAGC AAGCGACTTG GAATCCTATA GTGAGGCAGT CCTAGGAAAA 
AGTAATCAGG AATATTGTGA CTGGATCAGA AGAGAAGATA CATGGGGAGG TGCAATTGAG 
GTTTCTATAT TATCTAAATT CTATCAGTGT GAAATTTGTG TAGTTGATAC CCAGACAGTC 
AGAATTGATC GTTTTGGGGA AGATGCTGGC TATGCTAAAC GGGTGCTTTT AATTTATGAT 
GGTATTCACT ATGATCCACT TGAACGTAAA ATCCCCAACT CAGACATTCC TCCTCAGACA 
ATTTTTTCCA CAAATGATGA TGTTGTCCTT GCACAGGCTT TGGAATTAGC AGAGGAAGCC 
AGAAGAAAAA GACAGTTTAC TGATGTAAAT CGGTTTACAT TGAGATGTAT GGTTTGTCAG 
AAAGGATTAA CAGGGCAAGT GGAAGCCAGA GAACATGCCA AGGAGACTGG ACACACCAAC 
TTTGGAGAAG TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

YOD1 ( XM_014055607.1 ) cDNA ORF clone, Thamnophis sirtalis -> XP_013911082.1 Thamnophis sirtalis YOD1 deubiquitinase (YOD1), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OTh16451
Clone ID Related Accession (Same CDS sequence)	XM_014055607.1
Accession Version	XM_014055607.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 774bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-10
Organism	Thamnophis sirtalis
Product	ubiquitin thioesterase OTU1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_013657969.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Thamnophis sirtalis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTATAGGG AAACGCTACG CGGGAGAAAC CAATTCCCTA CCTTTCGCAC AGGGTTTAAG 
CACCCAGGTG ATACTCTAAT AGTTGAAGAA GATACAACCA AGCCCAAGAC TGATTCATCT 
ATAGTTACAA AGCGGACTGT TTCTAATTCG GTTAGAGAAG CTGTACCTGT GCTTGCCCGA 
AAGGTTGTTC CAGCTGACAA CTCATGTCTT TTTACCAGCA TATATTATGT AGTAGAAGGT 
GGGGTTTATG AACCAGGCTG TGCCCCAGAA ATGAGAAATC TCATTGCCCA AATTGTAGCA 
AGCGACTTGG AATCCTATAG TGAGGCAGTC CTAGGAAAAA GTAATCAGGA ATATTGTGAC 
TGGATCAGAA GAGAAGATAC ATGGGGAGGT GCAATTGAGG TTTCTATATT ATCTAAATTC 
TATCAGTGTG AAATTTGTGT AGTTGATACC CAGACAGTCA GAATTGATCG TTTTGGGGAA 
GATGCTGGCT ATGCTAAACG GGTGCTTTTA ATTTATGATG GTATTCACTA TGATCCACTT 
GAACGTAAAA TCCCCAACTC AGACATTCCT CCTCAGACAA TTTTTTCCAC AAATGATGAT 
GTTGTCCTTG CACAGGCTTT GGAATTAGCA GAGGAAGCCA GAAGAAAAAG ACAGTTTACT 
GATGTAAATC GGTTTACATT GAGATGTATG GTTTGTCAGA AAGGATTAAC AGGGCAAGTG 
GAAGCCAGAG AACATGCCAA GGAGACTGGA CACACCAACT TTGGAGAAGT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_013911082.1
CDS	113..886
Translation	MYRETLRGRNQFPTFRTGFKHPGDTLIVEEDTTKPKTDSSIVTKRTVSNSVREAVPVLARKVVPADNSCLFTSIYYVVEGGVYEPGCAPEMRNLIAQIVASDLESYSEAVLGKSNQEYCDWIRREDTWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDAGYAKRVLLIYDGIHYDPLERKIPNSDIPPQTIFSTNDDVVLAQALELAEEARRKRQFTDVNRFTLRCMVCQKGLTGQVEAREHAKETGHTNFGEV

Target ORF information:

RefSeq Version	XM_014055607.1
Organism	Thamnophis sirtalis
Definition	Thamnophis sirtalis YOD1 deubiquitinase (YOD1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014055607.1

ORF Insert Sequence:

ATGTATAGGG AAACGCTACG CGGGAGAAAC CAATTCCCTA CCTTTCGCAC AGGGTTTAAG 
CACCCAGGTG ATACTCTAAT AGTTGAAGAA GATACAACCA AGCCCAAGAC TGATTCATCT 
ATAGTTACAA AGCGGACTGT TTCTAATTCG GTTAGAGAAG CTGTACCTGT GCTTGCCCGA 
AAGGTTGTTC CAGCTGACAA CTCATGTCTT TTTACCAGCA TATATTATGT AGTAGAAGGT 
GGGGTTTATG AACCAGGCTG TGCCCCAGAA ATGAGAAATC TCATTGCCCA AATTGTAGCA 
AGCGACTTGG AATCCTATAG TGAGGCAGTC CTAGGAAAAA GTAATCAGGA ATATTGTGAC 
TGGATCAGAA GAGAAGATAC ATGGGGAGGT GCAATTGAGG TTTCTATATT ATCTAAATTC 
TATCAGTGTG AAATTTGTGT AGTTGATACC CAGACAGTCA GAATTGATCG TTTTGGGGAA 
GATGCTGGCT ATGCTAAACG GGTGCTTTTA ATTTATGATG GTATTCACTA TGATCCACTT 
GAACGTAAAA TCCCCAACTC AGACATTCCT CCTCAGACAA TTTTTTCCAC AAATGATGAT 
GTTGTCCTTG CACAGGCTTT GGAATTAGCA GAGGAAGCCA GAAGAAAAAG ACAGTTTACT 
GATGTAAATC GGTTTACATT GAGATGTATG GTTTGTCAGA AAGGATTAAC AGGGCAAGTG 
GAAGCCAGAG AACATGCCAA GGAGACTGGA CACACCAACT TTGGAGAAGT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.