Jup cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Jup
Entrez Gene ID	81679
Full Name	junction plakoglobin
General protein information	Preferred Names junction plakoglobin Names junction plakoglobin gamma-catenin (plakoglobin)
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 10 Map Location: 10q31
Summary	a tumor suppressor present at cell adhesion sites in confluent cell [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
XM_006247429.2	XP_006247491.1	junction plakoglobin isoform X1
NM_031047.2	NP_112309.2	junction plakoglobin
XM_006247430.3	XP_006247492.1	junction plakoglobin isoform X1
XM_017597548.1	XP_017453037.1	junction plakoglobin isoform X1

Pathways from BioSystems

Homologies

Homo sapiens (human)	JUP	NP_068831.1
Gallus gallus (chicken)	JUP	NP_001254482.1
Danio rerio (zebrafish)	LOC100330886	XP_002665522.2
Rattus norvegicus (Norway rat)	Jup	NP_112309.2
Xenopus tropicalis (tropical clawed frog)	jup	NP_989380.1
	JUP	XP_001107394.1
Canis lupus familiaris (dog)	JUP	XP_861718.1
Bos taurus (cattle)	JUP	NP_001004024.1
Pan troglodytes (chimpanzee)	JUP	XP_003315520.2
Mus musculus (house mouse)	Jup	NP_034723.1
Danio rerio (zebrafish)	jupa	NP_571252.1

Gene Ontology
Bibliography

Related articles in PubMed

MicroRNA-939 governs vascular integrity and angiogenesis through targeting ?-catenin in endothelial cells.
Hou S, Fang M, Zhu Q, Liu Y, Liu L, Li X
Biochemical and biophysical research communications484(1)27-33(2017 02)

E-cadherin interactome complexity and robustness resolved by quantitative proteomics.
Guo Z, Neilson LJ, Zhong H, Murray PS, Zanivan S, Zaidel-Bar R
Science signaling7(354)rs7(2014 Dec)

SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers.
Zanivan S, Maione F, Hein MY, Hern?ndez-Fernaud JR, Ostasiewicz P, Giraudo E, Mann M
Molecular & cellular proteomics : MCP12(12)3599-611(2013 Dec)

Identification of HDAC4 as a target of ?-catenin that regulates the oncogenic K-Ras-mediated malignant phenotype of Rat2 cells.
Yim JH, Baek JH, Lee CW, Kim MJ, Yun HS, Hong EH, Lee SJ, Park JK, Um HD, Hwang SG
Biochemical and biophysical research communications436(3)436-42(2013 Jul)

Mutated desmoglein-2 proteins are incorporated into desmosomes and exhibit dominant-negative effects in arrhythmogenic right ventricular cardiomyopathy.
Rasmussen TB, Palmfeldt J, Nissen PH, Magnoni R, Dalager S, Jensen UB, Kim WY, Heickendorff L, M?lgaard H, Jensen HK, Baandrup UT, Bross P, Mogensen J
Human mutation34(5)697-705(2013 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

gamma-Catenin regulates expression of HDAC4, but not HDAC1 and HDAC2 in Rat-K-Ras cells.
Title: Identification of HDAC4 as a target of ?-catenin that regulates the oncogenic K-Ras-mediated malignant phenotype of Rat2 cells.

Results provide marker proteins Gap-43 and newly identified candidate neuronal growth-associated proteins MAP1B, CRMP5, crmp5 and catenins.
Title: Identification of functional marker proteins in the mammalian growth cone.

plakophilin-2 is indeed of obvious importance for myocardial architecture and cell-cell coupling of rat cardiomyocytes growing in culture.
Title: The area composita of adhering junctions connecting heart muscle cells of vertebrates. V. The importance of plakophilin-2 demonstrated by small interference RNA-mediated knockdown in cultured rat cardiomyocytes.

downregulated in liver epithelial cells after TCCD exposure
Title: TCDD-dependent downregulation of gamma-catenin in rat liver epithelial cells (WB-F344).

The following Jup gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Jup cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa07457	NM_031047.2 Latest version!	Rattus norvegicus junction plakoglobin (Jup), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$391.30 $559.00
ORa33768	XM_006247429.2 Latest version!	Rattus norvegicus junction plakoglobin (Jup), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00
ORa33768	XM_017597548.1 Latest version!	Rattus norvegicus junction plakoglobin (Jup), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00
ORa33768	XM_006247430.3 Latest version!	Rattus norvegicus junction plakoglobin (Jup), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Jup ( NM_031047.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_112309.2 Rattus norvegicus junction plakoglobin (Jup), mRNA.

Price & Availability↑

CloneID	ORa07457
Clone ID Related Accession (Same CDS sequence)	NM_031047.2
Accession Version	NM_031047.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2238bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-19
Organism	Rattus norvegicus(Norway rat)
Product	junction plakoglobin
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065580.1. On Feb 1, 2004 this sequence version replaced NM_031047.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC065580.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906350 [ECO:0000348] ##Evidence-Data-END##

ATGGAGGTGA TGAACCTTAT TGAACAGCCC ATCAAGGTGA CGGAGTGGCA GCAGACGTAC 
ACCTATGACT CGGGCATCCA CTCCGGTGTC AATACCTGTG TGCCCTCTGT CAGCAGCAAG 
GGCCTCCTCG ATGAGGATGA CACCTGCGGC AGACAGTACA CACTCAAGAA AACTACCACC 
TACACACAAG GGGTGCCACA GAGCCAAGGC GACCTGGAGT ACCAGATGTC CACCACGGCC 
AGAGCCAAGC GGGTGCGGGA GGCCATGTGC CCAGGTGTCT CAGGCGAGGA CAGTTCTCTC 
CTCCTGGCCA CCCAGGTGGA GGGGCAGACG ACCAACCTGC AGCGACTGGC CGAACCATCC 
CAGCTACTCA AGTCGGCCAT TGTACATCTC ATCAACTACC AGGACGACGC AGAGCTGGCC 
ACCCGGGCTC TGCCTGAGCT CACCAAGCTG CTCAACGATG AGGACCCGGT AGTGGTCACC 
AAGGCGGCTA TGATCGTGAA CCAGCTGTCC AAGAAGGAGG CATCCCGCCG TGCCCTGATG 
GGCTCGCCCC AGCTGGTGGC GGCTGTGGTG CGGACCATGC AGAACACCAG TGACCTGGAT 
ACTGCCCGCT GTACCACCAG CATCCTGCAC AACCTCTCCC ACCACCGAGA GGGGCTGCTT 
GCTATCTTCA AGTCTGGAGG CATCCCCGCC CTGGTCCGAA TGCTCAGTTC CCCCGTAGAG 
TCTGTCCTGT TCTACGCCAT CACCACACTG CACAACCTGC TGCTCTACCA GGAGGGCGCC 
AAGATGGCGG TGCGTCTGGC AGACGGACTG CAGAAGATGG TGCCCCTACT TAACAAGAAC 
AACCCCAAAT TCCTGGCCAT CACCACCGAC TGCCTGCAGC TCCTGGCCTA TGGCAACCAG 
GAGAGCAAGC TGATCATCCT GGCCAATGGG GGACCCCAGG GTCTTGTGCA GATCATGAGG 
AACTACAGCT ACGAGAAGCT TCTGTGGACC ACCAGCCGGG TGCTCAAGGT GCTCTCCGTG 
TGCCCCAGCA ACAAGCCTGC CATCGTGGAG GCTGGTGGGA TGCAGGCTCT AGGCAAGCAC 
TTGACAAGCA ACAGCCCCCG CCTGGTGCAG AACTGCCTGT GGACTCTGCG CAATCTCTCG 
GATGTGGCCA CCAAGCAGGA GGGCCTGGAG AACGTGCTGA AGATCCTGGT CAATCAGCTG 
AGCGTGGATG ATGTCAACGT CCTCACCTGT GCCACGGGCA CCCTCTCCAA CCTGACCTGC 
AACAACAGCA AAAACAAGAC GCTGGTGACG CAGAACAGTG GCGTGGAGGC GCTCATCCAC 
GCCATCCTCA GAGCCGGAGA CAAGGACGAC ATCACAGAGC CCGCCGTTTG CGCCCTGCGC 
CACCTTACCA GCCGCCACCC TGAGGCTGAG ATGGCCCAGA ACTCTGTGCG CCTCAACTAT 
GGAATCCCGG CCATTGTGAA ACTGCTCAAC CAGCCGAACC AGTGGCCACT GGTCAAGGCA 
ACTATCGGCC TGATCCGGAA CCTGGCTCTG TGCCCCGCCA ATCATGCCCC GCTGCAGGAG 
GCCGCGGTCA TTCCCCGCCT CGTTCAGCTG CTGGTCAAGG CCCACCAGGA TGCCCAGCGA 
CATGTAGCTG CGGGCACCCA GCAGCCCTAC ACGGATGGTG TGAGGATGGA GGAGATCGTG 
GAGGGCTGCA CCGGAGCCCT GCACATCCTC GCCCGAGATC CCATGAACCG CATGGAGATC 
TTCCGGCTCA ACACCATTCC CCTGTTTGTC CAGCTCCTGT ATTCCTCTGT GGAGAACATC 
CAGCGTGTGG CTGCCGGAGT GCTGTGCGAG CTGGCCCAGG ACAAGGAGGC TGCCGATGCC 
ATAGACGCGG AGGGCGCCTC TGCCCCTCTC ATGGAACTGC TCCACTCCCG CAATGAGGGG 
ACCGCGACCT ACGCTGCTGC TGTCCTGTTC CGCATCTCCG AGGACAAGAA CCCAGATTAC 
CGTAAGCGAG TGTCTGTGGA ACTCACCAAC TCGCTCTTCA AGCATGACCC AGCTGCCTGG 
GAGGCTGCCC AGAGCATGAT CCCGATCAAC GAACCCTATG CAGACGACAT GGATGCAACC 
TACCGCCCCA TGTACTCCAG CGATGTGCCT CTGGACCCCC TGGATATGCA CATGGACATG 
GATGGCGACT ACCCCATGGA CACCTACAGC GACGGCCTGA GACCTCCCTA CCCCGCTGCA 
GACCACATGC TGGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_112309.2
CDS	392..2629
Translation	MEVMNLIEQPIKVTEWQQTYTYDSGIHSGVNTCVPSVSSKGLLDEDDTCGRQYTLKKTTTYTQGVPQSQGDLEYQMSTTARAKRVREAMCPGVSGEDSSLLLATQVEGQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQGLVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLENVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVELTNSLFKHDPAAWEAAQSMIPINEPYADDMDATYRPMYSSDVPLDPLDMHMDMDGDYPMDTYSDGLRPPYPAADHMLA

Target ORF information:

RefSeq Version	NM_031047.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus junction plakoglobin (Jup), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_031047.2

ORF Insert Sequence:

ATGGAGGTGA TGAACCTTAT TGAACAGCCC ATCAAGGTGA CGGAGTGGCA GCAGACGTAC 
ACCTATGACT CGGGCATCCA CTCCGGTGTC AATACCTGTG TGCCCTCTGT CAGCAGCAAG 
GGCCTCCTCG ATGAGGATGA CACCTGCGGC AGACAGTACA CACTCAAGAA AACTACCACC 
TACACACAAG GGGTGCCACA GAGCCAAGGC GACCTGGAGT ACCAGATGTC CACCACGGCC 
AGAGCCAAGC GGGTGCGGGA GGCCATGTGC CCAGGTGTCT CAGGCGAGGA CAGTTCTCTC 
CTCCTGGCCA CCCAGGTGGA GGGGCAGACG ACCAACCTGC AGCGACTGGC CGAACCATCC 
CAGCTACTCA AGTCGGCCAT TGTACATCTC ATCAACTACC AGGACGACGC AGAGCTGGCC 
ACCCGGGCTC TGCCTGAGCT CACCAAGCTG CTCAACGATG AGGACCCGGT AGTGGTCACC 
AAGGCGGCTA TGATCGTGAA CCAGCTGTCC AAGAAGGAGG CATCCCGCCG TGCCCTGATG 
GGCTCGCCCC AGCTGGTGGC GGCTGTGGTG CGGACCATGC AGAACACCAG TGACCTGGAT 
ACTGCCCGCT GTACCACCAG CATCCTGCAC AACCTCTCCC ACCACCGAGA GGGGCTGCTT 
GCTATCTTCA AGTCTGGAGG CATCCCCGCC CTGGTCCGAA TGCTCAGTTC CCCCGTAGAG 
TCTGTCCTGT TCTACGCCAT CACCACACTG CACAACCTGC TGCTCTACCA GGAGGGCGCC 
AAGATGGCGG TGCGTCTGGC AGACGGACTG CAGAAGATGG TGCCCCTACT TAACAAGAAC 
AACCCCAAAT TCCTGGCCAT CACCACCGAC TGCCTGCAGC TCCTGGCCTA TGGCAACCAG 
GAGAGCAAGC TGATCATCCT GGCCAATGGG GGACCCCAGG GTCTTGTGCA GATCATGAGG 
AACTACAGCT ACGAGAAGCT TCTGTGGACC ACCAGCCGGG TGCTCAAGGT GCTCTCCGTG 
TGCCCCAGCA ACAAGCCTGC CATCGTGGAG GCTGGTGGGA TGCAGGCTCT AGGCAAGCAC 
TTGACAAGCA ACAGCCCCCG CCTGGTGCAG AACTGCCTGT GGACTCTGCG CAATCTCTCG 
GATGTGGCCA CCAAGCAGGA GGGCCTGGAG AACGTGCTGA AGATCCTGGT CAATCAGCTG 
AGCGTGGATG ATGTCAACGT CCTCACCTGT GCCACGGGCA CCCTCTCCAA CCTGACCTGC 
AACAACAGCA AAAACAAGAC GCTGGTGACG CAGAACAGTG GCGTGGAGGC GCTCATCCAC 
GCCATCCTCA GAGCCGGAGA CAAGGACGAC ATCACAGAGC CCGCCGTTTG CGCCCTGCGC 
CACCTTACCA GCCGCCACCC TGAGGCTGAG ATGGCCCAGA ACTCTGTGCG CCTCAACTAT 
GGAATCCCGG CCATTGTGAA ACTGCTCAAC CAGCCGAACC AGTGGCCACT GGTCAAGGCA 
ACTATCGGCC TGATCCGGAA CCTGGCTCTG TGCCCCGCCA ATCATGCCCC GCTGCAGGAG 
GCCGCGGTCA TTCCCCGCCT CGTTCAGCTG CTGGTCAAGG CCCACCAGGA TGCCCAGCGA 
CATGTAGCTG CGGGCACCCA GCAGCCCTAC ACGGATGGTG TGAGGATGGA GGAGATCGTG 
GAGGGCTGCA CCGGAGCCCT GCACATCCTC GCCCGAGATC CCATGAACCG CATGGAGATC 
TTCCGGCTCA ACACCATTCC CCTGTTTGTC CAGCTCCTGT ATTCCTCTGT GGAGAACATC 
CAGCGTGTGG CTGCCGGAGT GCTGTGCGAG CTGGCCCAGG ACAAGGAGGC TGCCGATGCC 
ATAGACGCGG AGGGCGCCTC TGCCCCTCTC ATGGAACTGC TCCACTCCCG CAATGAGGGG 
ACCGCGACCT ACGCTGCTGC TGTCCTGTTC CGCATCTCCG AGGACAAGAA CCCAGATTAC 
CGTAAGCGAG TGTCTGTGGA ACTCACCAAC TCGCTCTTCA AGCATGACCC AGCTGCCTGG 
GAGGCTGCCC AGAGCATGAT CCCGATCAAC GAACCCTATG CAGACGACAT GGATGCAACC 
TACCGCCCCA TGTACTCCAG CGATGTGCCT CTGGACCCCC TGGATATGCA CATGGACATG 
GATGGCGACT ACCCCATGGA CACCTACAGC GACGGCCTGA GACCTCCCTA CCCCGCTGCA 
GACCACATGC TGGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Jup ( XM_006247429.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006247491.1 Rattus norvegicus junction plakoglobin (Jup), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa33768
Clone ID Related Accession (Same CDS sequence)	XM_006247429.2 , XM_006247430.3 , XM_017597548.1
Accession Version	XM_006247429.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2238bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	junction plakoglobin isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006247429.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGGTGA TGAACCTTAT TGAACAGCCC ATCAAGGTGA CGGAGTGGCA GCAGACGTAC 
ACCTATGACT CGGGCATCCA CTCCGGTGTC AATACCTGTG TGCCCTCTGT CAGCAGCAAG 
GGCCTCCTCG ATGAGGATGA CACCTGCGGC AGACAGTACA CACTCAAGAA AACTACCACC 
TACACACAAG GGGTGCCACA GAGCCAAGGC GACCTGGAGT ACCAGATGTC CACCACGGCC 
AGAGCCAAGC GGGTGCGGGA GGCCATGTGC CCAGGTGTCT CAGGCGAGGA CAGTTCTCTC 
CTCCTGGCCA CCCAGGTGGA GGGGCAGACG ACCAACCTGC AGCGACTGGC CGAACCATCC 
CAGCTACTCA AGTCGGCCAT TGTACATCTC ATCAACTACC AGGACGACGC AGAGCTGGCC 
ACCCGGGCTC TGCCTGAGCT CACCAAGCTG CTCAACGATG AGGACCCGGT AGTGGTCACC 
AAGGCGGCTA TGATCGTGAA CCAGCTGTCC AAGAAGGAGG CATCCCGCCG TGCCCTGATG 
GGCTCGCCCC AGCTGGTGGC GGCTGTGGTG CGGACCATGC AGAACACCAG TGACCTGGAT 
ACTGCCCGCT GTACCACCAG CATCCTGCAC AACCTCTCCC ACCACCGAGA GGGGCTGCTT 
GCTATCTTCA AGTCTGGAGG CATCCCCGCC CTGGTCCGAA TGCTCAGTTC CCCCGTAGAG 
TCTGTCCTGT TCTACGCCAT CACCACACTG CACAACCTGC TGCTCTACCA GGAGGGCGCC 
AAGATGGCGG TGCGTCTGGC AGACGGACTG CAGAAGATGG TGCCCCTACT TAACAAGAAC 
AACCCCAAAT TCCTGGCCAT CACCACCGAC TGCCTGCAGC TCCTGGCCTA TGGCAACCAG 
GAGAGCAAGC TGATCATCCT GGCCAATGGG GGACCCCAGG GTCTTGTGCA GATCATGAGG 
AACTACAGCT ACGAGAAGCT TCTGTGGACC ACCAGCCGGG TGCTCAAGGT GCTCTCCGTG 
TGCCCCAGCA ACAAGCCTGC CATCGTGGAG GCTGGTGGGA TGCAGGCTCT AGGCAAGCAC 
TTGACAAGCA ACAGCCCCCG CCTGGTGCAG AACTGCCTGT GGACTCTGCG CAATCTCTCG 
GATGTGGCCA CCAAGCAGGA GGGCCTGGAG AACGTGCTGA AGATCCTGGT CAATCAGCTG 
AGCGTGGATG ATGTCAACGT CCTCACCTGT GCCACGGGCA CCCTCTCCAA CCTGACCTGC 
AACAACAGCA AAAACAAGAC GCTGGTGACG CAGAACAGTG GCGTGGAGGC GCTCATCCAC 
GCCATCCTCA GAGCCGGAGA CAAGGACGAC ATCACAGAGC CCGCCGTTTG CGCCCTGCGC 
CACCTTACCA GCCGCCACCC CGAGGCTGAG ATGGCCCAGA ACTCTGTGCG CCTCAACTAT 
GGAATCCCGG CCATTGTGAA ACTGCTCAAC CAGCCGAACC AGTGGCCACT GGTCAAGGCA 
ACTATCGGCC TGATCCGGAA CCTGGCTCTG TGCCCCGCCA ATCATGCCCC GCTGCAGGAG 
GCCGCGGTCA TTCCCCGCCT CGTTCAGCTG CTGGTCAAGG CCCACCAGGA TGCCCAGCGA 
CATGTAGCTG CGGGCACCCA GCAGCCCTAC ACGGATGGTG TGAGGATGGA GGAGATCGTG 
GAGGGCTGCA CCGGAGCCCT GCACATCCTC GCCCGAGATC CCATGAACCG CATGGAGATC 
TTCCGGCTCA ACACCATTCC CCTGTTTGTC CAGCTCCTGT ATTCCTCTGT GGAGAACATC 
CAGCGTGTGG CTGCCGGAGT GCTGTGCGAG CTGGCCCAGG ACAAGGAGGC TGCTGATGCC 
ATAGACGCGG AGGGCGCCTC TGCCCCTCTC ATGGAACTGC TCCACTCCCG CAATGAGGGG 
ACCGCGACCT ACGCTGCTGC TGTCCTGTTC CGCATCTCCG AGGACAAGAA CCCAGATTAC 
CGTAAGCGAG TGTCTGTGGA ACTCACCAAC TCGCTCTTCA AGCATGACCC AGCTGCCTGG 
GAGGCTGCCC AGAGCATGAT CCCGATCAAC GAACCCTATG CAGATGACAT GGATGCAACC 
TACCGCCCCA TGTACTCCAG CGATGTGCCT CTGGACCCCC TGGATATGCA CATGGACATG 
GATGGCGACT ACCCCATGGA CACCTACAGC GACGGCCTGA GACCTCCCTA CCCCGCTGCA 
GACCACATGC TGGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006247491.1
CDS	138..2375
Translation	MEVMNLIEQPIKVTEWQQTYTYDSGIHSGVNTCVPSVSSKGLLDEDDTCGRQYTLKKTTTYTQGVPQSQGDLEYQMSTTARAKRVREAMCPGVSGEDSSLLLATQVEGQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQGLVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLENVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVELTNSLFKHDPAAWEAAQSMIPINEPYADDMDATYRPMYSSDVPLDPLDMHMDMDGDYPMDTYSDGLRPPYPAADHMLA

Target ORF information:

RefSeq Version	XM_006247429.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus junction plakoglobin (Jup), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006247429.2

ORF Insert Sequence:

ATGGAGGTGA TGAACCTTAT TGAACAGCCC ATCAAGGTGA CGGAGTGGCA GCAGACGTAC 
ACCTATGACT CGGGCATCCA CTCCGGTGTC AATACCTGTG TGCCCTCTGT CAGCAGCAAG 
GGCCTCCTCG ATGAGGATGA CACCTGCGGC AGACAGTACA CACTCAAGAA AACTACCACC 
TACACACAAG GGGTGCCACA GAGCCAAGGC GACCTGGAGT ACCAGATGTC CACCACGGCC 
AGAGCCAAGC GGGTGCGGGA GGCCATGTGC CCAGGTGTCT CAGGCGAGGA CAGTTCTCTC 
CTCCTGGCCA CCCAGGTGGA GGGGCAGACG ACCAACCTGC AGCGACTGGC CGAACCATCC 
CAGCTACTCA AGTCGGCCAT TGTACATCTC ATCAACTACC AGGACGACGC AGAGCTGGCC 
ACCCGGGCTC TGCCTGAGCT CACCAAGCTG CTCAACGATG AGGACCCGGT AGTGGTCACC 
AAGGCGGCTA TGATCGTGAA CCAGCTGTCC AAGAAGGAGG CATCCCGCCG TGCCCTGATG 
GGCTCGCCCC AGCTGGTGGC GGCTGTGGTG CGGACCATGC AGAACACCAG TGACCTGGAT 
ACTGCCCGCT GTACCACCAG CATCCTGCAC AACCTCTCCC ACCACCGAGA GGGGCTGCTT 
GCTATCTTCA AGTCTGGAGG CATCCCCGCC CTGGTCCGAA TGCTCAGTTC CCCCGTAGAG 
TCTGTCCTGT TCTACGCCAT CACCACACTG CACAACCTGC TGCTCTACCA GGAGGGCGCC 
AAGATGGCGG TGCGTCTGGC AGACGGACTG CAGAAGATGG TGCCCCTACT TAACAAGAAC 
AACCCCAAAT TCCTGGCCAT CACCACCGAC TGCCTGCAGC TCCTGGCCTA TGGCAACCAG 
GAGAGCAAGC TGATCATCCT GGCCAATGGG GGACCCCAGG GTCTTGTGCA GATCATGAGG 
AACTACAGCT ACGAGAAGCT TCTGTGGACC ACCAGCCGGG TGCTCAAGGT GCTCTCCGTG 
TGCCCCAGCA ACAAGCCTGC CATCGTGGAG GCTGGTGGGA TGCAGGCTCT AGGCAAGCAC 
TTGACAAGCA ACAGCCCCCG CCTGGTGCAG AACTGCCTGT GGACTCTGCG CAATCTCTCG 
GATGTGGCCA CCAAGCAGGA GGGCCTGGAG AACGTGCTGA AGATCCTGGT CAATCAGCTG 
AGCGTGGATG ATGTCAACGT CCTCACCTGT GCCACGGGCA CCCTCTCCAA CCTGACCTGC 
AACAACAGCA AAAACAAGAC GCTGGTGACG CAGAACAGTG GCGTGGAGGC GCTCATCCAC 
GCCATCCTCA GAGCCGGAGA CAAGGACGAC ATCACAGAGC CCGCCGTTTG CGCCCTGCGC 
CACCTTACCA GCCGCCACCC CGAGGCTGAG ATGGCCCAGA ACTCTGTGCG CCTCAACTAT 
GGAATCCCGG CCATTGTGAA ACTGCTCAAC CAGCCGAACC AGTGGCCACT GGTCAAGGCA 
ACTATCGGCC TGATCCGGAA CCTGGCTCTG TGCCCCGCCA ATCATGCCCC GCTGCAGGAG 
GCCGCGGTCA TTCCCCGCCT CGTTCAGCTG CTGGTCAAGG CCCACCAGGA TGCCCAGCGA 
CATGTAGCTG CGGGCACCCA GCAGCCCTAC ACGGATGGTG TGAGGATGGA GGAGATCGTG 
GAGGGCTGCA CCGGAGCCCT GCACATCCTC GCCCGAGATC CCATGAACCG CATGGAGATC 
TTCCGGCTCA ACACCATTCC CCTGTTTGTC CAGCTCCTGT ATTCCTCTGT GGAGAACATC 
CAGCGTGTGG CTGCCGGAGT GCTGTGCGAG CTGGCCCAGG ACAAGGAGGC TGCTGATGCC 
ATAGACGCGG AGGGCGCCTC TGCCCCTCTC ATGGAACTGC TCCACTCCCG CAATGAGGGG 
ACCGCGACCT ACGCTGCTGC TGTCCTGTTC CGCATCTCCG AGGACAAGAA CCCAGATTAC 
CGTAAGCGAG TGTCTGTGGA ACTCACCAAC TCGCTCTTCA AGCATGACCC AGCTGCCTGG 
GAGGCTGCCC AGAGCATGAT CCCGATCAAC GAACCCTATG CAGATGACAT GGATGCAACC 
TACCGCCCCA TGTACTCCAG CGATGTGCCT CTGGACCCCC TGGATATGCA CATGGACATG 
GATGGCGACT ACCCCATGGA CACCTACAGC GACGGCCTGA GACCTCCCTA CCCCGCTGCA 
GACCACATGC TGGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Jup ( XM_006247430.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006247492.1 Rattus norvegicus junction plakoglobin (Jup), transcript variant X2, mRNA.

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CloneID	ORa33768
Clone ID Related Accession (Same CDS sequence)	XM_006247429.2 , XM_006247430.3 , XM_017597548.1
Accession Version	XM_006247430.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2238bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	junction plakoglobin isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006247430.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGGTGA TGAACCTTAT TGAACAGCCC ATCAAGGTGA CGGAGTGGCA GCAGACGTAC 
ACCTATGACT CGGGCATCCA CTCCGGTGTC AATACCTGTG TGCCCTCTGT CAGCAGCAAG 
GGCCTCCTCG ATGAGGATGA CACCTGCGGC AGACAGTACA CACTCAAGAA AACTACCACC 
TACACACAAG GGGTGCCACA GAGCCAAGGC GACCTGGAGT ACCAGATGTC CACCACGGCC 
AGAGCCAAGC GGGTGCGGGA GGCCATGTGC CCAGGTGTCT CAGGCGAGGA CAGTTCTCTC 
CTCCTGGCCA CCCAGGTGGA GGGGCAGACG ACCAACCTGC AGCGACTGGC CGAACCATCC 
CAGCTACTCA AGTCGGCCAT TGTACATCTC ATCAACTACC AGGACGACGC AGAGCTGGCC 
ACCCGGGCTC TGCCTGAGCT CACCAAGCTG CTCAACGATG AGGACCCGGT AGTGGTCACC 
AAGGCGGCTA TGATCGTGAA CCAGCTGTCC AAGAAGGAGG CATCCCGCCG TGCCCTGATG 
GGCTCGCCCC AGCTGGTGGC GGCTGTGGTG CGGACCATGC AGAACACCAG TGACCTGGAT 
ACTGCCCGCT GTACCACCAG CATCCTGCAC AACCTCTCCC ACCACCGAGA GGGGCTGCTT 
GCTATCTTCA AGTCTGGAGG CATCCCCGCC CTGGTCCGAA TGCTCAGTTC CCCCGTAGAG 
TCTGTCCTGT TCTACGCCAT CACCACACTG CACAACCTGC TGCTCTACCA GGAGGGCGCC 
AAGATGGCGG TGCGTCTGGC AGACGGACTG CAGAAGATGG TGCCCCTACT TAACAAGAAC 
AACCCCAAAT TCCTGGCCAT CACCACCGAC TGCCTGCAGC TCCTGGCCTA TGGCAACCAG 
GAGAGCAAGC TGATCATCCT GGCCAATGGG GGACCCCAGG GTCTTGTGCA GATCATGAGG 
AACTACAGCT ACGAGAAGCT TCTGTGGACC ACCAGCCGGG TGCTCAAGGT GCTCTCCGTG 
TGCCCCAGCA ACAAGCCTGC CATCGTGGAG GCTGGTGGGA TGCAGGCTCT AGGCAAGCAC 
TTGACAAGCA ACAGCCCCCG CCTGGTGCAG AACTGCCTGT GGACTCTGCG CAATCTCTCG 
GATGTGGCCA CCAAGCAGGA GGGCCTGGAG AACGTGCTGA AGATCCTGGT CAATCAGCTG 
AGCGTGGATG ATGTCAACGT CCTCACCTGT GCCACGGGCA CCCTCTCCAA CCTGACCTGC 
AACAACAGCA AAAACAAGAC GCTGGTGACG CAGAACAGTG GCGTGGAGGC GCTCATCCAC 
GCCATCCTCA GAGCCGGAGA CAAGGACGAC ATCACAGAGC CCGCCGTTTG CGCCCTGCGC 
CACCTTACCA GCCGCCACCC CGAGGCTGAG ATGGCCCAGA ACTCTGTGCG CCTCAACTAT 
GGAATCCCGG CCATTGTGAA ACTGCTCAAC CAGCCGAACC AGTGGCCACT GGTCAAGGCA 
ACTATCGGCC TGATCCGGAA CCTGGCTCTG TGCCCCGCCA ATCATGCCCC GCTGCAGGAG 
GCCGCGGTCA TTCCCCGCCT CGTTCAGCTG CTGGTCAAGG CCCACCAGGA TGCCCAGCGA 
CATGTAGCTG CGGGCACCCA GCAGCCCTAC ACGGATGGTG TGAGGATGGA GGAGATCGTG 
GAGGGCTGCA CCGGAGCCCT GCACATCCTC GCCCGAGATC CCATGAACCG CATGGAGATC 
TTCCGGCTCA ACACCATTCC CCTGTTTGTC CAGCTCCTGT ATTCCTCTGT GGAGAACATC 
CAGCGTGTGG CTGCCGGAGT GCTGTGCGAG CTGGCCCAGG ACAAGGAGGC TGCTGATGCC 
ATAGACGCGG AGGGCGCCTC TGCCCCTCTC ATGGAACTGC TCCACTCCCG CAATGAGGGG 
ACCGCGACCT ACGCTGCTGC TGTCCTGTTC CGCATCTCCG AGGACAAGAA CCCAGATTAC 
CGTAAGCGAG TGTCTGTGGA ACTCACCAAC TCGCTCTTCA AGCATGACCC AGCTGCCTGG 
GAGGCTGCCC AGAGCATGAT CCCGATCAAC GAACCCTATG CAGATGACAT GGATGCAACC 
TACCGCCCCA TGTACTCCAG CGATGTGCCT CTGGACCCCC TGGATATGCA CATGGACATG 
GATGGCGACT ACCCCATGGA CACCTACAGC GACGGCCTGA GACCTCCCTA CCCCGCTGCA 
GACCACATGC TGGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006247492.1
CDS	132..2369
Translation	MEVMNLIEQPIKVTEWQQTYTYDSGIHSGVNTCVPSVSSKGLLDEDDTCGRQYTLKKTTTYTQGVPQSQGDLEYQMSTTARAKRVREAMCPGVSGEDSSLLLATQVEGQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQGLVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLENVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVELTNSLFKHDPAAWEAAQSMIPINEPYADDMDATYRPMYSSDVPLDPLDMHMDMDGDYPMDTYSDGLRPPYPAADHMLA

Target ORF information:

RefSeq Version	XM_006247430.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus junction plakoglobin (Jup), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006247430.3

ORF Insert Sequence:

ATGGAGGTGA TGAACCTTAT TGAACAGCCC ATCAAGGTGA CGGAGTGGCA GCAGACGTAC 
ACCTATGACT CGGGCATCCA CTCCGGTGTC AATACCTGTG TGCCCTCTGT CAGCAGCAAG 
GGCCTCCTCG ATGAGGATGA CACCTGCGGC AGACAGTACA CACTCAAGAA AACTACCACC 
TACACACAAG GGGTGCCACA GAGCCAAGGC GACCTGGAGT ACCAGATGTC CACCACGGCC 
AGAGCCAAGC GGGTGCGGGA GGCCATGTGC CCAGGTGTCT CAGGCGAGGA CAGTTCTCTC 
CTCCTGGCCA CCCAGGTGGA GGGGCAGACG ACCAACCTGC AGCGACTGGC CGAACCATCC 
CAGCTACTCA AGTCGGCCAT TGTACATCTC ATCAACTACC AGGACGACGC AGAGCTGGCC 
ACCCGGGCTC TGCCTGAGCT CACCAAGCTG CTCAACGATG AGGACCCGGT AGTGGTCACC 
AAGGCGGCTA TGATCGTGAA CCAGCTGTCC AAGAAGGAGG CATCCCGCCG TGCCCTGATG 
GGCTCGCCCC AGCTGGTGGC GGCTGTGGTG CGGACCATGC AGAACACCAG TGACCTGGAT 
ACTGCCCGCT GTACCACCAG CATCCTGCAC AACCTCTCCC ACCACCGAGA GGGGCTGCTT 
GCTATCTTCA AGTCTGGAGG CATCCCCGCC CTGGTCCGAA TGCTCAGTTC CCCCGTAGAG 
TCTGTCCTGT TCTACGCCAT CACCACACTG CACAACCTGC TGCTCTACCA GGAGGGCGCC 
AAGATGGCGG TGCGTCTGGC AGACGGACTG CAGAAGATGG TGCCCCTACT TAACAAGAAC 
AACCCCAAAT TCCTGGCCAT CACCACCGAC TGCCTGCAGC TCCTGGCCTA TGGCAACCAG 
GAGAGCAAGC TGATCATCCT GGCCAATGGG GGACCCCAGG GTCTTGTGCA GATCATGAGG 
AACTACAGCT ACGAGAAGCT TCTGTGGACC ACCAGCCGGG TGCTCAAGGT GCTCTCCGTG 
TGCCCCAGCA ACAAGCCTGC CATCGTGGAG GCTGGTGGGA TGCAGGCTCT AGGCAAGCAC 
TTGACAAGCA ACAGCCCCCG CCTGGTGCAG AACTGCCTGT GGACTCTGCG CAATCTCTCG 
GATGTGGCCA CCAAGCAGGA GGGCCTGGAG AACGTGCTGA AGATCCTGGT CAATCAGCTG 
AGCGTGGATG ATGTCAACGT CCTCACCTGT GCCACGGGCA CCCTCTCCAA CCTGACCTGC 
AACAACAGCA AAAACAAGAC GCTGGTGACG CAGAACAGTG GCGTGGAGGC GCTCATCCAC 
GCCATCCTCA GAGCCGGAGA CAAGGACGAC ATCACAGAGC CCGCCGTTTG CGCCCTGCGC 
CACCTTACCA GCCGCCACCC CGAGGCTGAG ATGGCCCAGA ACTCTGTGCG CCTCAACTAT 
GGAATCCCGG CCATTGTGAA ACTGCTCAAC CAGCCGAACC AGTGGCCACT GGTCAAGGCA 
ACTATCGGCC TGATCCGGAA CCTGGCTCTG TGCCCCGCCA ATCATGCCCC GCTGCAGGAG 
GCCGCGGTCA TTCCCCGCCT CGTTCAGCTG CTGGTCAAGG CCCACCAGGA TGCCCAGCGA 
CATGTAGCTG CGGGCACCCA GCAGCCCTAC ACGGATGGTG TGAGGATGGA GGAGATCGTG 
GAGGGCTGCA CCGGAGCCCT GCACATCCTC GCCCGAGATC CCATGAACCG CATGGAGATC 
TTCCGGCTCA ACACCATTCC CCTGTTTGTC CAGCTCCTGT ATTCCTCTGT GGAGAACATC 
CAGCGTGTGG CTGCCGGAGT GCTGTGCGAG CTGGCCCAGG ACAAGGAGGC TGCTGATGCC 
ATAGACGCGG AGGGCGCCTC TGCCCCTCTC ATGGAACTGC TCCACTCCCG CAATGAGGGG 
ACCGCGACCT ACGCTGCTGC TGTCCTGTTC CGCATCTCCG AGGACAAGAA CCCAGATTAC 
CGTAAGCGAG TGTCTGTGGA ACTCACCAAC TCGCTCTTCA AGCATGACCC AGCTGCCTGG 
GAGGCTGCCC AGAGCATGAT CCCGATCAAC GAACCCTATG CAGATGACAT GGATGCAACC 
TACCGCCCCA TGTACTCCAG CGATGTGCCT CTGGACCCCC TGGATATGCA CATGGACATG 
GATGGCGACT ACCCCATGGA CACCTACAGC GACGGCCTGA GACCTCCCTA CCCCGCTGCA 
GACCACATGC TGGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Jup ( XM_017597548.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017453037.1 Rattus norvegicus junction plakoglobin (Jup), transcript variant X3, mRNA.

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CloneID	ORa33768
Clone ID Related Accession (Same CDS sequence)	XM_006247429.2 , XM_006247430.3 , XM_017597548.1
Accession Version	XM_017597548.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2238bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	junction plakoglobin isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGGTGA TGAACCTTAT TGAACAGCCC ATCAAGGTGA CGGAGTGGCA GCAGACGTAC 
ACCTATGACT CGGGCATCCA CTCCGGTGTC AATACCTGTG TGCCCTCTGT CAGCAGCAAG 
GGCCTCCTCG ATGAGGATGA CACCTGCGGC AGACAGTACA CACTCAAGAA AACTACCACC 
TACACACAAG GGGTGCCACA GAGCCAAGGC GACCTGGAGT ACCAGATGTC CACCACGGCC 
AGAGCCAAGC GGGTGCGGGA GGCCATGTGC CCAGGTGTCT CAGGCGAGGA CAGTTCTCTC 
CTCCTGGCCA CCCAGGTGGA GGGGCAGACG ACCAACCTGC AGCGACTGGC CGAACCATCC 
CAGCTACTCA AGTCGGCCAT TGTACATCTC ATCAACTACC AGGACGACGC AGAGCTGGCC 
ACCCGGGCTC TGCCTGAGCT CACCAAGCTG CTCAACGATG AGGACCCGGT AGTGGTCACC 
AAGGCGGCTA TGATCGTGAA CCAGCTGTCC AAGAAGGAGG CATCCCGCCG TGCCCTGATG 
GGCTCGCCCC AGCTGGTGGC GGCTGTGGTG CGGACCATGC AGAACACCAG TGACCTGGAT 
ACTGCCCGCT GTACCACCAG CATCCTGCAC AACCTCTCCC ACCACCGAGA GGGGCTGCTT 
GCTATCTTCA AGTCTGGAGG CATCCCCGCC CTGGTCCGAA TGCTCAGTTC CCCCGTAGAG 
TCTGTCCTGT TCTACGCCAT CACCACACTG CACAACCTGC TGCTCTACCA GGAGGGCGCC 
AAGATGGCGG TGCGTCTGGC AGACGGACTG CAGAAGATGG TGCCCCTACT TAACAAGAAC 
AACCCCAAAT TCCTGGCCAT CACCACCGAC TGCCTGCAGC TCCTGGCCTA TGGCAACCAG 
GAGAGCAAGC TGATCATCCT GGCCAATGGG GGACCCCAGG GTCTTGTGCA GATCATGAGG 
AACTACAGCT ACGAGAAGCT TCTGTGGACC ACCAGCCGGG TGCTCAAGGT GCTCTCCGTG 
TGCCCCAGCA ACAAGCCTGC CATCGTGGAG GCTGGTGGGA TGCAGGCTCT AGGCAAGCAC 
TTGACAAGCA ACAGCCCCCG CCTGGTGCAG AACTGCCTGT GGACTCTGCG CAATCTCTCG 
GATGTGGCCA CCAAGCAGGA GGGCCTGGAG AACGTGCTGA AGATCCTGGT CAATCAGCTG 
AGCGTGGATG ATGTCAACGT CCTCACCTGT GCCACGGGCA CCCTCTCCAA CCTGACCTGC 
AACAACAGCA AAAACAAGAC GCTGGTGACG CAGAACAGTG GCGTGGAGGC GCTCATCCAC 
GCCATCCTCA GAGCCGGAGA CAAGGACGAC ATCACAGAGC CCGCCGTTTG CGCCCTGCGC 
CACCTTACCA GCCGCCACCC CGAGGCTGAG ATGGCCCAGA ACTCTGTGCG CCTCAACTAT 
GGAATCCCGG CCATTGTGAA ACTGCTCAAC CAGCCGAACC AGTGGCCACT GGTCAAGGCA 
ACTATCGGCC TGATCCGGAA CCTGGCTCTG TGCCCCGCCA ATCATGCCCC GCTGCAGGAG 
GCCGCGGTCA TTCCCCGCCT CGTTCAGCTG CTGGTCAAGG CCCACCAGGA TGCCCAGCGA 
CATGTAGCTG CGGGCACCCA GCAGCCCTAC ACGGATGGTG TGAGGATGGA GGAGATCGTG 
GAGGGCTGCA CCGGAGCCCT GCACATCCTC GCCCGAGATC CCATGAACCG CATGGAGATC 
TTCCGGCTCA ACACCATTCC CCTGTTTGTC CAGCTCCTGT ATTCCTCTGT GGAGAACATC 
CAGCGTGTGG CTGCCGGAGT GCTGTGCGAG CTGGCCCAGG ACAAGGAGGC TGCTGATGCC 
ATAGACGCGG AGGGCGCCTC TGCCCCTCTC ATGGAACTGC TCCACTCCCG CAATGAGGGG 
ACCGCGACCT ACGCTGCTGC TGTCCTGTTC CGCATCTCCG AGGACAAGAA CCCAGATTAC 
CGTAAGCGAG TGTCTGTGGA ACTCACCAAC TCGCTCTTCA AGCATGACCC AGCTGCCTGG 
GAGGCTGCCC AGAGCATGAT CCCGATCAAC GAACCCTATG CAGATGACAT GGATGCAACC 
TACCGCCCCA TGTACTCCAG CGATGTGCCT CTGGACCCCC TGGATATGCA CATGGACATG 
GATGGCGACT ACCCCATGGA CACCTACAGC GACGGCCTGA GACCTCCCTA CCCCGCTGCA 
GACCACATGC TGGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017453037.1
CDS	146..2383
Translation	MEVMNLIEQPIKVTEWQQTYTYDSGIHSGVNTCVPSVSSKGLLDEDDTCGRQYTLKKTTTYTQGVPQSQGDLEYQMSTTARAKRVREAMCPGVSGEDSSLLLATQVEGQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQGLVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLENVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVELTNSLFKHDPAAWEAAQSMIPINEPYADDMDATYRPMYSSDVPLDPLDMHMDMDGDYPMDTYSDGLRPPYPAADHMLA

Target ORF information:

RefSeq Version	XM_017597548.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus junction plakoglobin (Jup), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017597548.1

ORF Insert Sequence:

ATGGAGGTGA TGAACCTTAT TGAACAGCCC ATCAAGGTGA CGGAGTGGCA GCAGACGTAC 
ACCTATGACT CGGGCATCCA CTCCGGTGTC AATACCTGTG TGCCCTCTGT CAGCAGCAAG 
GGCCTCCTCG ATGAGGATGA CACCTGCGGC AGACAGTACA CACTCAAGAA AACTACCACC 
TACACACAAG GGGTGCCACA GAGCCAAGGC GACCTGGAGT ACCAGATGTC CACCACGGCC 
AGAGCCAAGC GGGTGCGGGA GGCCATGTGC CCAGGTGTCT CAGGCGAGGA CAGTTCTCTC 
CTCCTGGCCA CCCAGGTGGA GGGGCAGACG ACCAACCTGC AGCGACTGGC CGAACCATCC 
CAGCTACTCA AGTCGGCCAT TGTACATCTC ATCAACTACC AGGACGACGC AGAGCTGGCC 
ACCCGGGCTC TGCCTGAGCT CACCAAGCTG CTCAACGATG AGGACCCGGT AGTGGTCACC 
AAGGCGGCTA TGATCGTGAA CCAGCTGTCC AAGAAGGAGG CATCCCGCCG TGCCCTGATG 
GGCTCGCCCC AGCTGGTGGC GGCTGTGGTG CGGACCATGC AGAACACCAG TGACCTGGAT 
ACTGCCCGCT GTACCACCAG CATCCTGCAC AACCTCTCCC ACCACCGAGA GGGGCTGCTT 
GCTATCTTCA AGTCTGGAGG CATCCCCGCC CTGGTCCGAA TGCTCAGTTC CCCCGTAGAG 
TCTGTCCTGT TCTACGCCAT CACCACACTG CACAACCTGC TGCTCTACCA GGAGGGCGCC 
AAGATGGCGG TGCGTCTGGC AGACGGACTG CAGAAGATGG TGCCCCTACT TAACAAGAAC 
AACCCCAAAT TCCTGGCCAT CACCACCGAC TGCCTGCAGC TCCTGGCCTA TGGCAACCAG 
GAGAGCAAGC TGATCATCCT GGCCAATGGG GGACCCCAGG GTCTTGTGCA GATCATGAGG 
AACTACAGCT ACGAGAAGCT TCTGTGGACC ACCAGCCGGG TGCTCAAGGT GCTCTCCGTG 
TGCCCCAGCA ACAAGCCTGC CATCGTGGAG GCTGGTGGGA TGCAGGCTCT AGGCAAGCAC 
TTGACAAGCA ACAGCCCCCG CCTGGTGCAG AACTGCCTGT GGACTCTGCG CAATCTCTCG 
GATGTGGCCA CCAAGCAGGA GGGCCTGGAG AACGTGCTGA AGATCCTGGT CAATCAGCTG 
AGCGTGGATG ATGTCAACGT CCTCACCTGT GCCACGGGCA CCCTCTCCAA CCTGACCTGC 
AACAACAGCA AAAACAAGAC GCTGGTGACG CAGAACAGTG GCGTGGAGGC GCTCATCCAC 
GCCATCCTCA GAGCCGGAGA CAAGGACGAC ATCACAGAGC CCGCCGTTTG CGCCCTGCGC 
CACCTTACCA GCCGCCACCC CGAGGCTGAG ATGGCCCAGA ACTCTGTGCG CCTCAACTAT 
GGAATCCCGG CCATTGTGAA ACTGCTCAAC CAGCCGAACC AGTGGCCACT GGTCAAGGCA 
ACTATCGGCC TGATCCGGAA CCTGGCTCTG TGCCCCGCCA ATCATGCCCC GCTGCAGGAG 
GCCGCGGTCA TTCCCCGCCT CGTTCAGCTG CTGGTCAAGG CCCACCAGGA TGCCCAGCGA 
CATGTAGCTG CGGGCACCCA GCAGCCCTAC ACGGATGGTG TGAGGATGGA GGAGATCGTG 
GAGGGCTGCA CCGGAGCCCT GCACATCCTC GCCCGAGATC CCATGAACCG CATGGAGATC 
TTCCGGCTCA ACACCATTCC CCTGTTTGTC CAGCTCCTGT ATTCCTCTGT GGAGAACATC 
CAGCGTGTGG CTGCCGGAGT GCTGTGCGAG CTGGCCCAGG ACAAGGAGGC TGCTGATGCC 
ATAGACGCGG AGGGCGCCTC TGCCCCTCTC ATGGAACTGC TCCACTCCCG CAATGAGGGG 
ACCGCGACCT ACGCTGCTGC TGTCCTGTTC CGCATCTCCG AGGACAAGAA CCCAGATTAC 
CGTAAGCGAG TGTCTGTGGA ACTCACCAAC TCGCTCTTCA AGCATGACCC AGCTGCCTGG 
GAGGCTGCCC AGAGCATGAT CCCGATCAAC GAACCCTATG CAGATGACAT GGATGCAACC 
TACCGCCCCA TGTACTCCAG CGATGTGCCT CTGGACCCCC TGGATATGCA CATGGACATG 
GATGGCGACT ACCCCATGGA CACCTACAGC GACGGCCTGA GACCTCCCTA CCCCGCTGCA 
GACCACATGC TGGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

MicroRNA-939 governs vascular integrity and angiogenesis through targeting ?-catenin in endothelial cells.
Biochemical and biophysical research communications484(1)27-33(2017 02)
Hou S,Fang M,Zhu Q,Liu Y,Liu L,Li X

E-cadherin interactome complexity and robustness resolved by quantitative proteomics.
Science signaling7(354)rs7(2014 Dec)
Guo Z,Neilson LJ,Zhong H,Murray PS,Zanivan S,Zaidel-Bar R

SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers.
Molecular & cellular proteomics : MCP12(12)3599-611(2013 Dec)
Zanivan S,Maione F,Hein MY,Hern?ndez-Fernaud JR,Ostasiewicz P,Giraudo E,Mann M

Identification of HDAC4 as a target of ?-catenin that regulates the oncogenic K-Ras-mediated malignant phenotype of Rat2 cells.
Biochemical and biophysical research communications436(3)436-42(2013 Jul)
Yim JH,Baek JH,Lee CW,Kim MJ,Yun HS,Hong EH,Lee SJ,Park JK,Um HD,Hwang SG

Mutated desmoglein-2 proteins are incorporated into desmosomes and exhibit dominant-negative effects in arrhythmogenic right ventricular cardiomyopathy.
Human mutation34(5)697-705(2013 May)
Rasmussen TB,Palmfeldt J,Nissen PH,Magnoni R,Dalager S,Jensen UB,Kim WY,Heickendorff L,M?lgaard H,Jensen HK,Baandrup UT,Bross P,Mogensen J

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Jup cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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