Rpl38 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rpl38
Entrez Gene ID	689284
Full Name	ribosomal protein L38
General protein information	Preferred Names ribosomal protein L38 Names 60S ribosomal protein L38
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 10 Map Location: 10q32.1

mRNA and Protein(s)

mRNA	Protein	Name
NM_001077592.1	NP_001071060.1	60S ribosomal protein L38
XM_008768393.1	XP_008766615.1	60S ribosomal protein L38 isoform X1

Pathways from BioSystems

Homologies

	RPL38	XP_001089804.2
Canis lupus familiaris (dog)	LOC100684485	XP_003434040.1
Bos taurus (cattle)	LOC100297522	XP_003585751.1
Rattus norvegicus (Norway rat)	Rpl38	NP_001071060.1
Rattus norvegicus (Norway rat)	LOC690468	XP_001074532.1
Rattus norvegicus (Norway rat)	LOC685963	XP_001065954.1

Gene Ontology
Bibliography

Related articles in PubMed

Structural snapshots of actively translating human ribosomes.
Behrmann E, Loerke J, Budkevich TV, Yamamoto K, Schmidt A, Penczek PA, Vos MR, B?rger J, Mielke T, Scheerer P, Spahn CM
Cell161(4)845-57(2015 May)

Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning.
Kondrashov N, Pusic A, Stumpf CR, Shimizu K, Hsieh AC, Ishijima J, Shiroishi T, Barna M
Cell145(3)383-397(2011 Apr)

Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for ?-Pix in negative regulation of focal adhesion maturation.
Kuo JC, Han X, Hsiao CT, Yates JR 3rd, Waterman CM
Nature cell biology13(4)383-93(2011 Apr)

Characterization of the proteome, diseases and evolution of the human postsynaptic density.
Bay?s A, van de Lagemaat LN, Collins MO, Croning MD, Whittle IR, Choudhary JS, Grant SG
Nature neuroscience14(1)19-21(2011 Jan)

Ectopic mineralization in the middle ear and chronic otitis media with effusion caused by RPL38 deficiency in the Tail-short (Ts) mouse.
Noben-Trauth K, Latoche JR
The Journal of biological chemistry286(4)3079-93(2011 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rpl38 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rpl38 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa10356	NM_001077592.1 Latest version!	Rattus norvegicus ribosomal protein L38 (Rpl38), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$69.30 $99.00
ORa10356	XM_008768393.1 Latest version!	Rattus norvegicus ribosomal protein L38 (Rpl38), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$69.30 $99.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rpl38 ( NM_001077592.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001071060.1 Rattus norvegicus ribosomal protein L38 (Rpl38), mRNA.

Price & Availability↑

CloneID	ORa10356
Clone ID Related Accession (Same CDS sequence)	NM_001077592.1 , XM_008768393.1
Accession Version	NM_001077592.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 213bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-18
Organism	Rattus norvegicus(Norway rat)
Product	60S ribosomal protein L38
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC101933.1. On or before Nov 9, 2006 this sequence version replaced XM_001071627.1, XM_001071665.1. ##Evidence-Data-START## Transcript exon combination :: BC101933.1, CB567125.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGCCTCGGA AAATTGAGGA AATCAAGGAC TTTCTACTCA CAGCCCGGCG GAAGGATGCC 
AAATCTGTCA AGATCAAGAA AAACAAGGAT AATGTAAAGT TCAAGGTCCG CTGTAGCAGG 
TACCTCTACA CCCTGGTTAT CACAGACAAG GAGAAGGCGG AGAAGCTGAA GCAGTCCCTG 
CCCCCAGGTT TGGCAGTGAA GGAGCTGAAA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001071060.1
CDS	52..264
Translation	MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKELK

Target ORF information:

RefSeq Version	NM_001077592.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus ribosomal protein L38 (Rpl38), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001077592.1

ORF Insert Sequence:

ATGCCTCGGA AAATTGAGGA AATCAAGGAC TTTCTACTCA CAGCCCGGCG GAAGGATGCC 
AAATCTGTCA AGATCAAGAA AAACAAGGAT AATGTAAAGT TCAAGGTCCG CTGTAGCAGG 
TACCTCTACA CCCTGGTTAT CACAGACAAG GAGAAGGCGG AGAAGCTGAA GCAGTCCCTG 
CCCCCAGGTT TGGCAGTGAA GGAGCTGAAA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Rpl38 ( XM_008768393.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008766615.1 Rattus norvegicus ribosomal protein L38 (Rpl38), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa10356
Clone ID Related Accession (Same CDS sequence)	NM_001077592.1 , XM_008768393.1
Accession Version	XM_008768393.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 213bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	60S ribosomal protein L38 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTCGGA AAATTGAGGA AATCAAGGAC TTTCTACTCA CAGCCCGGCG GAAGGATGCC 
AAATCTGTCA AGATCAAGAA AAACAAGGAT AATGTAAAGT TCAAGGTCCG CTGTAGCAGG 
TACCTCTACA CCCTGGTTAT CACAGACAAG GAGAAGGCGG AGAAGCTGAA GCAGTCCCTG 
CCCCCAGGTT TGGCAGTGAA GGAGCTGAAA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008766615.1
CDS	51..263
Translation	MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKELK

Target ORF information:

RefSeq Version	XM_008768393.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus ribosomal protein L38 (Rpl38), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008768393.1

ORF Insert Sequence:

ATGCCTCGGA AAATTGAGGA AATCAAGGAC TTTCTACTCA CAGCCCGGCG GAAGGATGCC 
AAATCTGTCA AGATCAAGAA AAACAAGGAT AATGTAAAGT TCAAGGTCCG CTGTAGCAGG 
TACCTCTACA CCCTGGTTAT CACAGACAAG GAGAAGGCGG AGAAGCTGAA GCAGTCCCTG 
CCCCCAGGTT TGGCAGTGAA GGAGCTGAAA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Structural snapshots of actively translating human ribosomes.
Cell161(4)845-57(2015 May)
Behrmann E,Loerke J,Budkevich TV,Yamamoto K,Schmidt A,Penczek PA,Vos MR,B?rger J,Mielke T,Scheerer P,Spahn CM

Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning.
Cell145(3)383-397(2011 Apr)
Kondrashov N,Pusic A,Stumpf CR,Shimizu K,Hsieh AC,Ishijima J,Shiroishi T,Barna M

Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for ?-Pix in negative regulation of focal adhesion maturation.
Nature cell biology13(4)383-93(2011 Apr)
Kuo JC,Han X,Hsiao CT,Yates JR 3rd,Waterman CM

Characterization of the proteome, diseases and evolution of the human postsynaptic density.
Nature neuroscience14(1)19-21(2011 Jan)
Bay?s A,van de Lagemaat LN,Collins MO,Croning MD,Whittle IR,Choudhary JS,Grant SG

Ectopic mineralization in the middle ear and chronic otitis media with effusion caused by RPL38 deficiency in the Tail-short (Ts) mouse.
The Journal of biological chemistry286(4)3079-93(2011 Jan)
Noben-Trauth K,Latoche JR