Pcdhb9 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pcdhb9
Entrez Gene ID	680047
Full Name	protocadherin beta 9
General protein information	Preferred Names protocadherin beta 9 Names protocadherin beta 9
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 18 Map Location: 18p11

mRNA and Protein(s)

mRNA	Protein	Name
NM_001109390.1	NP_001102860.1	protocadherin beta 9

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Pcdhb9	NP_444364.3
Rattus norvegicus (Norway rat)	Pcdhb9	NP_001102860.1

Gene Ontology
Bibliography

Related articles in PubMed

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pcdhb9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcdhb9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa41604	NM_001109390.1 Latest version!	Rattus norvegicus protocadherin beta 9 (Pcdhb9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pcdhb9 ( NM_001109390.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001102860.1 Rattus norvegicus protocadherin beta 9 (Pcdhb9), mRNA.

Price & Availability↑

CloneID	ORa41604
Clone ID Related Accession (Same CDS sequence)	NM_001109390.1
Accession Version	NM_001109390.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-27
Organism	Rattus norvegicus(Norway rat)
Product	protocadherin beta 9
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473974.1. On Oct 4, 2007 this sequence version replaced XM_001055473.1.

ATGCACTTCC CCATCATGGA GAAGCTGAGG AAGATTCACC TAAACAGGCA AGTAATGCTG 
TTTATTTTTA TGATGGCTTT GGTTCTGGTT TGCAGTGAGG CAACAACTCG ATACTCTATT 
TTAGAGGAAA CAGAAAGTGG CTCCTTTGTG GCCCATCTGG CCAAGGATCT GGGTCTGGGA 
GCTGGGGAGC TGGCTGCCAG GTCTGCACGG GTGGTGTCTG ATGATTACAA GCAGAGATTG 
CTGCTGGATC CTGAGACTGG AGATTTGATT CTGAGAGAGA AACTAGACCG GGAAGAGCTG 
TGTGGCTCTT TGGATCCCTG TGTGCTGCCT TTCCAGGTGT CTCTTGAAAA GCCAGTGCAA 
TATTTTCAAG GAGAATTATT GATCCAGGAC ATAAATGATC ATGCTCCAGA ATTCCCAGAT 
AGAGAATTGC TCTTGAAAAT TCCGGAAAAC AGCCAGCCAG GCACACGATT TTCATTGAAA 
TTAGCCCAGG ATTTGGATGT GGGCAACAAT GGGCTTCAAG AGTACAGAGT CAGCACCAAC 
CCTCATTTTC ATGTCCTCAC TCGAAATAAT AGTGAAGGCA AGAAATACCC AGAGTTGGTG 
CAGGACAGAG CCCTGGACAG AGAGGAGCAG GCAGAGCTGA GCTTAACCCT CATAGCTCTG 
GATGGCGGGT CTCCACCGAG GTCAGGAACA GCCTTGGTTC GAATCCTGAT CATAGACATC 
AATGACAATG CTCCTGAGTT TGTGAACAGC CCCTATGAGG TGCAGGTTCT AGAGAGCTGT 
CCCCCAGACT CCCCAATCCT GACTGTGTTA GCACGGGATG CAGATGCTGG CAACTTTGGG 
AGTGTTTCCT ATGGCTTGTT CCAAGCATCA GATGAAATCC AACAAACATT CTCAATAAAC 
GAAACTACTG GAGACATGCG ACTGAAAAAG AAATTGGATT TTGAAAAAAT TAAATCTTAT 
CATGTGGAAA TCGAGGCCAC AGACGGAGGA GGGCTTTCTG GGAGAGGTTC TGTGATGATA 
GAGGTGTTGG ATGTGAACGA CAATGCTCCA GAGCTGACCA TATCTTCACT GACCAGCTCA 
GTCCCAGAAA ATGCTCCTGA GACCATAATC AGCATCTTCA GAGTTGGAGA CAGGGATTCC 
GGAGAGAATG GAAAGGCGGT TTGCTCTATC TCAGAAAACC TGCCATTCAT TCTAAAATCC 
ACTTTCAAGA ATTTCTACAC TCTGGTGACA GAGAGCCCTC TGGACAGAGA GAGTAGAGCT 
GAATACAACA TCACCATCTC AGTCTCAGAC CTGGGCACAC CCAGGCTCAC AACCCAGCAC 
ACCATAACAG TGCAGGTGTC TGACATCAAC GACAACGCCC CTGCCTTCAC CCAAACCTCC 
TACACCATGT TTGTCCGCGA GAACAACAGC CCTGCCCTGC ACATAGGCAC CATCAGTGCC 
ACAGATGCAG ACTCAGGCTC CAATGCCCAC ATCACCTACT CACTGCTGCC GCCCCAAAAT 
CCACAGCTGG CCCTTGTCTC GCTCATCTCC ATCAACGCAG ACAATGGGCA GCTGTTCGCG 
CTCAGGGCGC TGGACTATGA GGCCCTGCAG GCCTTCGAAT TCTATGTGGG TGCCACAGAC 
CAAGGTTCAC CAGCGCTCAG CAGCCAGGCT CTGGTGCATG TGATGGTGCT GGACGACAAT 
GACAATGCGC CCTTCGTGCT CTACCCGCTG CAGAACGCCT CTGCACCCTG CACCGAGCTG 
CTCCCCAGGG CAGCGGAGCC AGGATACCTG ATCACCAAGG TTGTGGCTGT GGACTGCGAC 
TCTGGCCAGA ATGCCTGGCT GTCATTCCAG TTGCTCAAGG CCACAGAGCC CGGGTTGTTT 
AGCGTGTGGG CACACAATGG CGAGGTACGC ACCACCAGGC TGCTGAGCGA GCGAGATGTG 
CCCAAGCACA GGCTACTTCT GCTGGTCAAG GACAATGGGG ACCCTGCGCG CTCTGCCACA 
GTCACGTTGC ACGTGCTACT TGTGGATGGA TTTTCACAGC CCTATCTGCC TCTGCCGGAA 
GTTGCTCGGA ACGCCGTTCA GGAAGATGAT GATGCTCTTA CACTGTACCT GGTCATAGCC 
TTGGCATCTG TGTCTTCTCT CTTCCTCTTG TCTGTGCTGC TGTTTGTGGG GGTGAGGCTG 
TGCAGGAGGG GCAGAGAGGT CTCTCTGGGT GGCTGCTCTA TTCCTGATGG ACACTTTCCT 
GGCCACCTGG TGGATGTCAG TGGAGCAGGG ACCCTGTCCC AAAGTTACCA GTATGAGGTG 
TGTCTGAGGG GAGACTCTGG GACTGGTGAG TTCAAGTTCC TGAAACCCAT GGTCCCCAAT 
GCTGGGATAG AAATTATGGA AAGTCCCCAC TGCAGGGAAA GCTTTGTATT CAACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001102860.1
CDS	192..2588
Translation	MHFPIMEKLRKIHLNRQVMLFIFMMALVLVCSEATTRYSILEETESGSFVAHLAKDLGLGAGELAARSARVVSDDYKQRLLLDPETGDLILREKLDREELCGSLDPCVLPFQVSLEKPVQYFQGELLIQDINDHAPEFPDRELLLKIPENSQPGTRFSLKLAQDLDVGNNGLQEYRVSTNPHFHVLTRNNSEGKKYPELVQDRALDREEQAELSLTLIALDGGSPPRSGTALVRILIIDINDNAPEFVNSPYEVQVLESCPPDSPILTVLARDADAGNFGSVSYGLFQASDEIQQTFSINETTGDMRLKKKLDFEKIKSYHVEIEATDGGGLSGRGSVMIEVLDVNDNAPELTISSLTSSVPENAPETIISIFRVGDRDSGENGKAVCSISENLPFILKSTFKNFYTLVTESPLDRESRAEYNITISVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDADSGSNAHITYSLLPPQNPQLALVSLISINADNGQLFALRALDYEALQAFEFYVGATDQGSPALSSQALVHVMVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLITKVVAVDCDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPARSATVTLHVLLVDGFSQPYLPLPEVARNAVQEDDDALTLYLVIALASVSSLFLLSVLLFVGVRLCRRGREVSLGGCSIPDGHFPGHLVDVSGAGTLSQSYQYEVCLRGDSGTGEFKFLKPMVPNAGIEIMESPHCRESFVFN

Target ORF information:

RefSeq Version	NM_001109390.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus protocadherin beta 9 (Pcdhb9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001109390.1

ORF Insert Sequence:

ATGCACTTCC CCATCATGGA GAAGCTGAGG AAGATTCACC TAAACAGGCA AGTAATGCTG 
TTTATTTTTA TGATGGCTTT GGTTCTGGTT TGCAGTGAGG CAACAACTCG ATACTCTATT 
TTAGAGGAAA CAGAAAGTGG CTCCTTTGTG GCCCATCTGG CCAAGGATCT GGGTCTGGGA 
GCTGGGGAGC TGGCTGCCAG GTCTGCACGG GTGGTGTCTG ATGATTACAA GCAGAGATTG 
CTGCTGGATC CTGAGACTGG AGATTTGATT CTGAGAGAGA AACTAGACCG GGAAGAGCTG 
TGTGGCTCTT TGGATCCCTG TGTGCTGCCT TTCCAGGTGT CTCTTGAAAA GCCAGTGCAA 
TATTTTCAAG GAGAATTATT GATCCAGGAC ATAAATGATC ATGCTCCAGA ATTCCCAGAT 
AGAGAATTGC TCTTGAAAAT TCCGGAAAAC AGCCAGCCAG GCACACGATT TTCATTGAAA 
TTAGCCCAGG ATTTGGATGT GGGCAACAAT GGGCTTCAAG AGTACAGAGT CAGCACCAAC 
CCTCATTTTC ATGTCCTCAC TCGAAATAAT AGTGAAGGCA AGAAATACCC AGAGTTGGTG 
CAGGACAGAG CCCTGGACAG AGAGGAGCAG GCAGAGCTGA GCTTAACCCT CATAGCTCTG 
GATGGCGGGT CTCCACCGAG GTCAGGAACA GCCTTGGTTC GAATCCTGAT CATAGACATC 
AATGACAATG CTCCTGAGTT TGTGAACAGC CCCTATGAGG TGCAGGTTCT AGAGAGCTGT 
CCCCCAGACT CCCCAATCCT GACTGTGTTA GCACGGGATG CAGATGCTGG CAACTTTGGG 
AGTGTTTCCT ATGGCTTGTT CCAAGCATCA GATGAAATCC AACAAACATT CTCAATAAAC 
GAAACTACTG GAGACATGCG ACTGAAAAAG AAATTGGATT TTGAAAAAAT TAAATCTTAT 
CATGTGGAAA TCGAGGCCAC AGACGGAGGA GGGCTTTCTG GGAGAGGTTC TGTGATGATA 
GAGGTGTTGG ATGTGAACGA CAATGCTCCA GAGCTGACCA TATCTTCACT GACCAGCTCA 
GTCCCAGAAA ATGCTCCTGA GACCATAATC AGCATCTTCA GAGTTGGAGA CAGGGATTCC 
GGAGAGAATG GAAAGGCGGT TTGCTCTATC TCAGAAAACC TGCCATTCAT TCTAAAATCC 
ACTTTCAAGA ATTTCTACAC TCTGGTGACA GAGAGCCCTC TGGACAGAGA GAGTAGAGCT 
GAATACAACA TCACCATCTC AGTCTCAGAC CTGGGCACAC CCAGGCTCAC AACCCAGCAC 
ACCATAACAG TGCAGGTGTC TGACATCAAC GACAACGCCC CTGCCTTCAC CCAAACCTCC 
TACACCATGT TTGTCCGCGA GAACAACAGC CCTGCCCTGC ACATAGGCAC CATCAGTGCC 
ACAGATGCAG ACTCAGGCTC CAATGCCCAC ATCACCTACT CACTGCTGCC GCCCCAAAAT 
CCACAGCTGG CCCTTGTCTC GCTCATCTCC ATCAACGCAG ACAATGGGCA GCTGTTCGCG 
CTCAGGGCGC TGGACTATGA GGCCCTGCAG GCCTTCGAAT TCTATGTGGG TGCCACAGAC 
CAAGGTTCAC CAGCGCTCAG CAGCCAGGCT CTGGTGCATG TGATGGTGCT GGACGACAAT 
GACAATGCGC CCTTCGTGCT CTACCCGCTG CAGAACGCCT CTGCACCCTG CACCGAGCTG 
CTCCCCAGGG CAGCGGAGCC AGGATACCTG ATCACCAAGG TTGTGGCTGT GGACTGCGAC 
TCTGGCCAGA ATGCCTGGCT GTCATTCCAG TTGCTCAAGG CCACAGAGCC CGGGTTGTTT 
AGCGTGTGGG CACACAATGG CGAGGTACGC ACCACCAGGC TGCTGAGCGA GCGAGATGTG 
CCCAAGCACA GGCTACTTCT GCTGGTCAAG GACAATGGGG ACCCTGCGCG CTCTGCCACA 
GTCACGTTGC ACGTGCTACT TGTGGATGGA TTTTCACAGC CCTATCTGCC TCTGCCGGAA 
GTTGCTCGGA ACGCCGTTCA GGAAGATGAT GATGCTCTTA CACTGTACCT GGTCATAGCC 
TTGGCATCTG TGTCTTCTCT CTTCCTCTTG TCTGTGCTGC TGTTTGTGGG GGTGAGGCTG 
TGCAGGAGGG GCAGAGAGGT CTCTCTGGGT GGCTGCTCTA TTCCTGATGG ACACTTTCCT 
GGCCACCTGG TGGATGTCAG TGGAGCAGGG ACCCTGTCCC AAAGTTACCA GTATGAGGTG 
TGTCTGAGGG GAGACTCTGG GACTGGTGAG TTCAAGTTCC TGAAACCCAT GGTCCCCAAT 
GCTGGGATAG AAATTATGGA AAGTCCCCAC TGCAGGGAAA GCTTTGTATT CAACTAA