Atp5h cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Atp5h
Entrez Gene ID	641434
Full Name	ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d
Synonyms	Atp5jd,Atpq
General protein information	Preferred Names ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d Names ATP synthase subunit d, mitochondrial ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d ATPase subunit d
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 10 Map Location: 10q32.1
Summary	subunit d of mitochondrial H(+)-ATP synthase [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
NM_019383.2	NP_062256.1	ATP synthase subunit d, mitochondrial
XM_008768390.2	XP_008766612.1	ATP synthase subunit d, mitochondrial isoform X1

Pathways from BioSystems

Homologies

Homo sapiens (human)	ATP5H	NP_006347.1
	ATP5H	XP_001092326.1
Bos taurus (cattle)	ATP5H	NP_777149.1
Rattus norvegicus (Norway rat)	Atp5h	NP_062256.1
Canis lupus familiaris (dog)	LOC102154055	XP_005641417.1
Gallus gallus (chicken)	ATP5H	XP_001232614.1
Drosophila melanogaster (fruit fly)	ATPsyn-d	NP_732400.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP011131	XP_309516.3
Pan troglodytes (chimpanzee)	ATP5H	XP_001138674.1
Xenopus tropicalis (tropical clawed frog)	atp5h	NP_001011021.1
Mus musculus (house mouse)	Atp5h	NP_082138.1
Danio rerio (zebrafish)	atp5h	NP_956996.1

Gene Ontology
Bibliography

Related articles in PubMed

Marine collagen peptides reduce endothelial cell injury in diabetic rats by inhibiting apoptosis and the expression of coupling factor 6 and microparticles.
Zhu C, Zhang W, Liu J, Mu B, Zhang F, Lai N, Zhou J, Xu A, Li Y
Molecular medicine reports16(4)3947-3957(2017 Oct)

Coupling Factor 6 Is Upregulated in Monocrotaline-induced Pulmonary Arterial Hypertension in Rats.
Li N, Yin J, Cai W, Liu J, Zhang N, Yan S, Song L, Li X
The American journal of the medical sciences352(6)631-636(2016 Dec)

Mechanisms of propofol attenuation of ketamine-induced neonatal brain injury.
Zhao CH, Li GH, Wang Q, Zhao B, Wang ZB
European review for medical and pharmacological sciences20(1)133-7(2016)

?PKC interaction with the d subunit of F1Fo ATP synthase impairs energetics and exacerbates ischemia/reperfusion injury in isolated rat hearts.
Walker M, Caldwell RW, Yoon Y, Nguyen TT, Johnson JA
Journal of molecular and cellular cardiology89(Pt B)232-40(2015 Dec)

Differential proteomic analysis of the anti-depressive effects of oleamide in a rat chronic mild stress model of depression.
Ge L, Zhu MM, Yang JY, Wang F, Zhang R, Zhang JH, Shen J, Tian HF, Wu CF
Pharmacology, biochemistry, and behavior13177-86(2015 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

the deltaPKC-dF1Fo inhibitor attenuated co-immunoprecipitation of deltaPKC with dF1Fo.
Title: ?PKC interaction with the d subunit of F1Fo ATP synthase impairs energetics and exacerbates ischemia/reperfusion injury in isolated rat hearts.

The following Atp5h gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Atp5h cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa12936	NM_019383.2 Latest version!	Rattus norvegicus ATP synthase peripheral stalk subunit d (Atp5pd), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$69.30 $99.00
ORa49662	XM_008768390.2 Latest version!	Rattus norvegicus ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d (Atp5h), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Atp5h ( NM_019383.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_062256.1 Rattus norvegicus ATP synthase peripheral stalk subunit d (Atp5pd), mRNA.

Price & Availability↑

CloneID	ORa12936
Clone ID Related Accession (Same CDS sequence)	NM_019383.2
Accession Version	NM_019383.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 486bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-03
Organism	Rattus norvegicus(Norway rat)
Product	ATP synthase subunit d, mitochondrial
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BC059139.1 and BC078846.1. On Nov 23, 2005 this sequence version replaced NM_019383.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC059139.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906347, SAMN01906348 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END##

ATGGCTGGGC GCAAACTTGC TCTAAAAACC ATCGATTGGG TATCTTTTGT GGAGATCATG 
CCCCAAAACC AGAAGGCAAT TGGAAACGCT CTGAAGTCCT GGAATGAGAC CTTCCACACC 
AGGTTGGCTA GTCTGTCTGA GAAACCACCA GCGATTGACT GGGCTTACTA CAGGGCCAAT 
GTGGACAAGC CTGGCTTGGT GGATGATTTT AAAAACAAGT ATAATGCTCT GAAGATCCCT 
GTGCCTGAGG ATAAATACAC AGCCCTAGTG GACGCCGAGG AGAAGGAGGA TGTGAAGAAC 
TGTGCCCAGT TCGTGACTGG ATCTCAGGCT AGGGTCCGGG AATATGAGAA GCAGCTGGAG 
AAAATAAAGA ACATGATTCC CTTTGACCAG ATGACGATTG ATGACTTGAA TGAGGTCTTC 
CCTGAAACCA AGCTGGACAA GAGGAAGTAC CCATACTGGC CCCATCAGCC CATCGAGAAC 
CTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_062256.1
CDS	53..538
Translation	MAGRKLALKTIDWVSFVEIMPQNQKAIGNALKSWNETFHTRLASLSEKPPAIDWAYYRANVDKPGLVDDFKNKYNALKIPVPEDKYTALVDAEEKEDVKNCAQFVTGSQARVREYEKQLEKIKNMIPFDQMTIDDLNEVFPETKLDKRKYPYWPHQPIENL

Target ORF information:

RefSeq Version	NM_019383.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus ATP synthase peripheral stalk subunit d (Atp5pd), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_019383.2

ORF Insert Sequence:

ATGGCTGGGC GCAAACTTGC TCTAAAAACC ATCGATTGGG TATCTTTTGT GGAGATCATG 
CCCCAAAACC AGAAGGCAAT TGGAAACGCT CTGAAGTCCT GGAATGAGAC CTTCCACACC 
AGGTTGGCTA GTCTGTCTGA GAAACCACCA GCGATTGACT GGGCTTACTA CAGGGCCAAT 
GTGGACAAGC CTGGCTTGGT GGATGATTTT AAAAACAAGT ATAATGCTCT GAAGATCCCT 
GTGCCTGAGG ATAAATACAC AGCCCTAGTG GACGCCGAGG AGAAGGAGGA TGTGAAGAAC 
TGTGCCCAGT TCGTGACTGG ATCTCAGGCT AGGGTCCGGG AATATGAGAA GCAGCTGGAG 
AAAATAAAGA ACATGATTCC CTTTGACCAG ATGACGATTG ATGACTTGAA TGAGGTCTTC 
CCTGAAACCA AGCTGGACAA GAGGAAGTAC CCATACTGGC CCCATCAGCC CATCGAGAAC 
CTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Atp5h ( XM_008768390.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008766612.1 Rattus norvegicus ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d (Atp5h), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa49662
Clone ID Related Accession (Same CDS sequence)	XM_008768390.2
Accession Version	XM_008768390.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 414bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	ATP synthase subunit d, mitochondrial isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768390.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGGGC GCAAACTTGC TCTAAAAACC ATCGATTGGG TATCTTTTGT GGAGATCATG 
CCCCAAAACC AGAAGGCAAT TGGAAACGCT CTGAAGTCCT GGAATGAGAC CTTCCACACC 
AGGTTGGCTA GTCTGTCTGA GAAACCACCA GCGATTGACT GGGCTTACTA CAGGGCCAAT 
GTGGACAAGC CTGGCTTGGT GGATGATTTT AAAAACAAGG TGAAGAACTG TGCCCAGTTC 
GTGACTGGAT CTCAGGCTAG GGTCCGGGAA TATGAGAAGC AGCTGGAGAA AATAAAGAAC 
ATGATTCCCT TTGACCAGAT GACGATTGAT GACTTGAATG AGGTCTTCCC TGAAACCAAG 
CTGGACAAGA GGAAGTACCC ATACTGGCCC CATCAGCCCA TCGAGAACCT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008766612.1
CDS	92..505
Translation	MAGRKLALKTIDWVSFVEIMPQNQKAIGNALKSWNETFHTRLASLSEKPPAIDWAYYRANVDKPGLVDDFKNKVKNCAQFVTGSQARVREYEKQLEKIKNMIPFDQMTIDDLNEVFPETKLDKRKYPYWPHQPIENL

Target ORF information:

RefSeq Version	XM_008768390.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d (Atp5h), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008768390.2

ORF Insert Sequence:

ATGGCTGGGC GCAAACTTGC TCTAAAAACC ATCGATTGGG TATCTTTTGT GGAGATCATG 
CCCCAAAACC AGAAGGCAAT TGGAAACGCT CTGAAGTCCT GGAATGAGAC CTTCCACACC 
AGGTTGGCTA GTCTGTCTGA GAAACCACCA GCGATTGACT GGGCTTACTA CAGGGCCAAT 
GTGGACAAGC CTGGCTTGGT GGATGATTTT AAAAACAAGG TGAAGAACTG TGCCCAGTTC 
GTGACTGGAT CTCAGGCTAG GGTCCGGGAA TATGAGAAGC AGCTGGAGAA AATAAAGAAC 
ATGATTCCCT TTGACCAGAT GACGATTGAT GACTTGAATG AGGTCTTCCC TGAAACCAAG 
CTGGACAAGA GGAAGTACCC ATACTGGCCC CATCAGCCCA TCGAGAACCT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Marine collagen peptides reduce endothelial cell injury in diabetic rats by inhibiting apoptosis and the expression of coupling factor 6 and microparticles.
Molecular medicine reports16(4)3947-3957(2017 Oct)
Zhu C,Zhang W,Liu J,Mu B,Zhang F,Lai N,Zhou J,Xu A,Li Y

Coupling Factor 6 Is Upregulated in Monocrotaline-induced Pulmonary Arterial Hypertension in Rats.
The American journal of the medical sciences352(6)631-636(2016 Dec)
Li N,Yin J,Cai W,Liu J,Zhang N,Yan S,Song L,Li X

Mechanisms of propofol attenuation of ketamine-induced neonatal brain injury.
European review for medical and pharmacological sciences20(1)133-7(2016)
Zhao CH,Li GH,Wang Q,Zhao B,Wang ZB

?PKC interaction with the d subunit of F1Fo ATP synthase impairs energetics and exacerbates ischemia/reperfusion injury in isolated rat hearts.
Journal of molecular and cellular cardiology89(Pt B)232-40(2015 Dec)
Walker M,Caldwell RW,Yoon Y,Nguyen TT,Johnson JA

Differential proteomic analysis of the anti-depressive effects of oleamide in a rat chronic mild stress model of depression.
Pharmacology, biochemistry, and behavior13177-86(2015 Apr)
Ge L,Zhu MM,Yang JY,Wang F,Zhang R,Zhang JH,Shen J,Tian HF,Wu CF