Clec9a cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Clec9a
Entrez Gene ID	502901
Full Name	C-type lectin domain containing 9A
Synonyms	RGD1562513
General protein information	Preferred Names C-type lectin domain containing 9A Names C-type lectin domain family 9 member A C-type lectin domain family 9, member A
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 4 Map Location: 4q42

mRNA and Protein(s)

mRNA	Protein	Name
XM_006237099.3	XP_006237161.1	C-type lectin domain family 9 member A isoform X1
NM_001109354.1	NP_001102824.1	C-type lectin domain family 9 member A

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	CLEC9A	XP_001143778.1
Canis lupus familiaris (dog)	CLEC9A	XP_854151.2
Mus musculus (house mouse)	Clec9a	NP_001192292.1
Rattus norvegicus (Norway rat)	Clec9a	NP_001102824.1
Homo sapiens (human)	CLEC9A	NP_997228.1
	CLEC9A	XP_001114857.1
Bos taurus (cattle)	LOC616060	XP_002687852.1

Gene Ontology
Bibliography

Related articles in PubMed

The complete inventory of receptors encoded by the rat natural killer cell gene complex.
Flornes LM, Nylenna ?, Saether PC, Daws MR, Dissen E, Fossum S
Immunogenetics62(8)521-30(2010 Aug)

Tumor therapy in mice via antigen targeting to a novel, DC-restricted C-type lectin.
Sancho D, Mour?o-S? D, Joffre OP, Schulz O, Rogers NC, Pennington DJ, Carlyle JR, Reis e Sousa C
The Journal of clinical investigation118(6)2098-110(2008 Jun)

CLEC9A is a novel activation C-type lectin-like receptor expressed on BDCA3+ dendritic cells and a subset of monocytes.
Huysamen C, Willment JA, Dennehy KM, Brown GD
The Journal of biological chemistry283(24)16693-701(2008 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Clec9a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Clec9a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa09710	NM_001109354.1 Latest version!	Rattus norvegicus C-type lectin domain containing 9A (Clec9a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00
ORa27607	XM_006237099.3 Latest version!	Rattus norvegicus C-type lectin domain family 9, member A (Clec9a), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Clec9a ( NM_001109354.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001102824.1 Rattus norvegicus C-type lectin domain containing 9A (Clec9a), mRNA.

Price & Availability↑

CloneID	ORa09710
Clone ID Related Accession (Same CDS sequence)	NM_001109354.1
Accession Version	NM_001109354.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 726bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-17
Organism	Rattus norvegicus(Norway rat)
Product	C-type lectin domain family 9 member A
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473964.2. On or before Oct 4, 2007 this sequence version replaced XM_001067888.1, XM_578403.1. ##Evidence-Data-START## Transcript exon combination :: FQ132394.1, FQ151748.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2689599, SAMEA2689603 [ECO:0000348] ##Evidence-Data-END##

ATGCATGAGG AAGAAATATA CACCTCTCTT CAGTGGGACA TTCCAACCTC AGAGGCCTCT 
CAGAAGTGTC CATCCCTTAG CAAATGTCCA GGAACATGGT GTATTGTGAC GGTGATTTCC 
TGTGTGGTCT GTGTGGGCTT ACTAGCAGCA TCCATTTTCT TGGGCATCAA GTTCTCCCAG 
GTGTCCTCTC TTGTAATGGA GCAGCGGGAA AGGCTCATCC GACAGGACAC AGCATTGCTG 
AACCTCACAG AGTGGCAGAG GAACCATACA CTGCAGTTAA AAAGCTGCCA AGCCTCACTA 
CAAAGATCTC TCCGTTCAGG CAGTAACTGC AACCCTTGTC CACCGAACTG GATTCAGAAT 
GGAAAAAGTT GTTACTATGC CTTTGACCGC TGGGAAACGT GGAACAACAG TAAGAAGAGT 
TGTTTAAAAG AGGGCGATAG TCTCCTTCAA ATAGACAGCA AAGAAGAAAT GGAGTTTATC 
AACCTCAGTA TATGGAAGCT CAAAGGAGGA TATGAATACT GGGTGGGAGT GTTTCAAGAT 
GGACCCAGTG GATCTTGGTT TTGGGAAGAT GGCTCTTCTC CTCTCTCTGA CTTGTTGCCA 
ACAGACAGAC AGCTATCAGC CAGCCAGATC TGTGGATACC TCAAAGACCA TACTCTCATC 
TCGGATAACT GCAGTAACTG GAAATATTTT ATCTGTGAGA AGAAGGCATT TGGATCCTGC 
ATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001102824.1
CDS	97..822
Translation	MHEEEIYTSLQWDIPTSEASQKCPSLSKCPGTWCIVTVISCVVCVGLLAASIFLGIKFSQVSSLVMEQRERLIRQDTALLNLTEWQRNHTLQLKSCQASLQRSLRSGSNCNPCPPNWIQNGKSCYYAFDRWETWNNSKKSCLKEGDSLLQIDSKEEMEFINLSIWKLKGGYEYWVGVFQDGPSGSWFWEDGSSPLSDLLPTDRQLSASQICGYLKDHTLISDNCSNWKYFICEKKAFGSCI

Target ORF information:

RefSeq Version	NM_001109354.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus C-type lectin domain containing 9A (Clec9a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001109354.1

ORF Insert Sequence:

ATGCATGAGG AAGAAATATA CACCTCTCTT CAGTGGGACA TTCCAACCTC AGAGGCCTCT 
CAGAAGTGTC CATCCCTTAG CAAATGTCCA GGAACATGGT GTATTGTGAC GGTGATTTCC 
TGTGTGGTCT GTGTGGGCTT ACTAGCAGCA TCCATTTTCT TGGGCATCAA GTTCTCCCAG 
GTGTCCTCTC TTGTAATGGA GCAGCGGGAA AGGCTCATCC GACAGGACAC AGCATTGCTG 
AACCTCACAG AGTGGCAGAG GAACCATACA CTGCAGTTAA AAAGCTGCCA AGCCTCACTA 
CAAAGATCTC TCCGTTCAGG CAGTAACTGC AACCCTTGTC CACCGAACTG GATTCAGAAT 
GGAAAAAGTT GTTACTATGC CTTTGACCGC TGGGAAACGT GGAACAACAG TAAGAAGAGT 
TGTTTAAAAG AGGGCGATAG TCTCCTTCAA ATAGACAGCA AAGAAGAAAT GGAGTTTATC 
AACCTCAGTA TATGGAAGCT CAAAGGAGGA TATGAATACT GGGTGGGAGT GTTTCAAGAT 
GGACCCAGTG GATCTTGGTT TTGGGAAGAT GGCTCTTCTC CTCTCTCTGA CTTGTTGCCA 
ACAGACAGAC AGCTATCAGC CAGCCAGATC TGTGGATACC TCAAAGACCA TACTCTCATC 
TCGGATAACT GCAGTAACTG GAAATATTTT ATCTGTGAGA AGAAGGCATT TGGATCCTGC 
ATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Clec9a ( XM_006237099.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006237161.1 Rattus norvegicus C-type lectin domain family 9, member A (Clec9a), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa27607
Clone ID Related Accession (Same CDS sequence)	XM_006237099.3
Accession Version	XM_006237099.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 582bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	C-type lectin domain family 9 member A isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006237099.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCATGAGG AAGAAATATA CACCTCTCTT CAGTGGGACA TTCCAACCTC AGAGGCCTCT 
CAGAAGTGTC CATCCCTTAG CAAATGTCCA GGAACATGGT GTATTGTGAC GGTGATTTCC 
TGTGTGGTCT GTGTGGGCTT ACTAGCAGCA TCCATTTTCT TGGGCATCAA GTTCTCCCAG 
GTGTCCTCTC TTGTAATGGA GCAGCGGGAA AGGCTCATCC GACAGGACAC AGCATTGCTG 
AACCTCACAG AGTGGCAGAG GAACCATACA CTGCAGTTAA AAAGCTGCCA AGCCTCACTA 
CAAAGATCTC TCCGTTCAGG TTGCCAACAG ACAGACAGCT ATCAGCCAGC CAGATCTGTG 
GATACCTCAA AGACCATACT CTCATCTCGG ATAACTGCAG TAACTGGAAA TATTTTATCT 
GTGAGAAGAA GGCATTTGGA TCCTGCATCT GAAAGATACA ACTCAAAGCT ACCTGCTACA 
CAAGTGTTCG AAAGAGGTCA GAGAGCAAAT GCAGGAGGAG GTTGGTGTGA GGCCTACAAA 
GGCAAACTTG CTTTTTCATA TGAACTTGGC AATATTCTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006237161.1
CDS	977..1558
Translation	MHEEEIYTSLQWDIPTSEASQKCPSLSKCPGTWCIVTVISCVVCVGLLAASIFLGIKFSQVSSLVMEQRERLIRQDTALLNLTEWQRNHTLQLKSCQASLQRSLRSGCQQTDSYQPARSVDTSKTILSSRITAVTGNILSVRRRHLDPASERYNSKLPATQVFERGQRANAGGGWCEAYKGKLAFSYELGNIL

Target ORF information:

RefSeq Version	XM_006237099.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus C-type lectin domain family 9, member A (Clec9a), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006237099.3

ORF Insert Sequence:

ATGCATGAGG AAGAAATATA CACCTCTCTT CAGTGGGACA TTCCAACCTC AGAGGCCTCT 
CAGAAGTGTC CATCCCTTAG CAAATGTCCA GGAACATGGT GTATTGTGAC GGTGATTTCC 
TGTGTGGTCT GTGTGGGCTT ACTAGCAGCA TCCATTTTCT TGGGCATCAA GTTCTCCCAG 
GTGTCCTCTC TTGTAATGGA GCAGCGGGAA AGGCTCATCC GACAGGACAC AGCATTGCTG 
AACCTCACAG AGTGGCAGAG GAACCATACA CTGCAGTTAA AAAGCTGCCA AGCCTCACTA 
CAAAGATCTC TCCGTTCAGG TTGCCAACAG ACAGACAGCT ATCAGCCAGC CAGATCTGTG 
GATACCTCAA AGACCATACT CTCATCTCGG ATAACTGCAG TAACTGGAAA TATTTTATCT 
GTGAGAAGAA GGCATTTGGA TCCTGCATCT GAAAGATACA ACTCAAAGCT ACCTGCTACA 
CAAGTGTTCG AAAGAGGTCA GAGAGCAAAT GCAGGAGGAG GTTGGTGTGA GGCCTACAAA 
GGCAAACTTG CTTTTTCATA TGAACTTGGC AATATTCTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The complete inventory of receptors encoded by the rat natural killer cell gene complex.
Immunogenetics62(8)521-30(2010 Aug)
Flornes LM,Nylenna ?,Saether PC,Daws MR,Dissen E,Fossum S

Tumor therapy in mice via antigen targeting to a novel, DC-restricted C-type lectin.
The Journal of clinical investigation118(6)2098-110(2008 Jun)
Sancho D,Mour?o-S? D,Joffre OP,Schulz O,Rogers NC,Pennington DJ,Carlyle JR,Reis e Sousa C

CLEC9A is a novel activation C-type lectin-like receptor expressed on BDCA3+ dendritic cells and a subset of monocytes.
The Journal of biological chemistry283(24)16693-701(2008 Jun)
Huysamen C,Willment JA,Dennehy KM,Brown GD