Rcl1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rcl1
Entrez Gene ID	309301
Full Name	RNA terminal phosphate cyclase-like 1
Synonyms	Ab1-353,Ac1292
General protein information	Preferred Names RNA terminal phosphate cyclase-like 1 Names RNA 3'-terminal phosphate cyclase-like protein
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 1 Map Location: 1q52

mRNA and Protein(s)

mRNA	Protein	Name
XM_006231208.3	XP_006231270.1	RNA 3'-terminal phosphate cyclase-like protein isoform X1
NM_001013152.1	NP_001013170.1	RNA 3'-terminal phosphate cyclase-like protein

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Rcl1	NP_067500.1
Gallus gallus (chicken)	RCL1	XP_424808.1
Danio rerio (zebrafish)	rcl1	NP_001003865.1
Drosophila melanogaster (fruit fly)	Rtc1	NP_572919.1
Kluyveromyces lactis	KLLA0C05984g	XP_452464.1
Oryza sativa (rice)	Os03g0833700	NP_001051811.1
	RCL1	XP_001084388.1
Caenorhabditis elegans (roundworm)	ZK1127.5	NP_495445.2
Xenopus tropicalis (tropical clawed frog)	rcl1	XP_002934227.2
Eremothecium gossypii	AGOS_ACL015W	NP_983389.1
Homo sapiens (human)	RCL1	NP_005763.3
Bos taurus (cattle)	RCL1	NP_001070599.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP010498	XP_314471.2
Saccharomyces cerevisiae (baker's yeast)	RCL1	NP_014633.1
Schizosaccharomyces pombe (fission yeast)	SPAC12G12.06c	NP_592892.1
Arabidopsis thaliana (thale cress)	AT5G22100	NP_680196.1
Pan troglodytes (chimpanzee)	RCL1	XP_520471.2
Canis lupus familiaris (dog)	RCL1	XP_541299.3
Rattus norvegicus (Norway rat)	Rcl1	NP_001013170.1

Gene Ontology
Bibliography

Related articles in PubMed

The roles of SSU processome components and surveillance factors in the initial processing of human ribosomal RNA.
Sloan KE, Bohnsack MT, Schneider C, Watkins NJ
RNA (New York, N.Y.)20(4)540-50(2014 Apr)

Two orthogonal cleavages separate subunit RNAs in mouse ribosome biogenesis.
Wang M, Anikin L, Pestov DG
Nucleic acids research42(17)11180-91(2014)

Rcl1p, the yeast protein similar to the RNA 3'-phosphate cyclase, associates with U3 snoRNP and is required for 18S rRNA biogenesis.
Billy E, Wegierski T, Nasr F, Filipowicz W
The EMBO journal19(9)2115-26(2000 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rcl1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rcl1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa03591	NM_001013152.1 Latest version!	Rattus norvegicus RNA terminal phosphate cyclase-like 1 (Rcl1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	5-7	$139.30 $199.00
ORa23997	XM_006231208.3 Latest version!	Rattus norvegicus RNA terminal phosphate cyclase-like 1 (Rcl1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rcl1 ( NM_001013152.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001013170.1 Rattus norvegicus RNA terminal phosphate cyclase-like 1 (Rcl1), mRNA.

Price & Availability↑

CloneID	ORa03591
Clone ID Related Accession (Same CDS sequence)	NM_001013152.1
Accession Version	NM_001013152.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 648bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-26
Organism	Rattus norvegicus(Norway rat)
Product	RNA 3'-terminal phosphate cyclase-like protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091413.1. On Mar 26, 2005 this sequence version replaced XM_219820.2. ##Evidence-Data-START## Transcript exon combination :: BC091413.1, CO558663.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGCCTCCTG GAGGAGGAGG TGAAGTGCTT TTCTCCTGCC CCGTGAGGAA GGTCCTGAAG 
CCTGTCCAGC TCACAGACCC AGGGAAAATC AAGCGCATCA GAGGAATGGC GTACTCAGTG 
CGTGTATCAC CTCAGATGGC AAACCGGATT GTGGATTCTG CAAGGGGCAT CCTCAACAAG 
TTCATCCCTG ACATCTATAT CTACACAGAT CACATGAAAG GCGTCAATTC TGGGAAGTCT 
CCAGGCTTCG GGCTGTCCCT GGTTGCAGAG ACTACCAACG GTACCTTCCT GAGTGCTGAA 
CTGGCCTCCA ATCCCCAGGG CCAGGGAGCA GCAGTGCTTC CTGAGGACCT CGGCAGGAAC 
TGTGCAAAGC TGCTGCTCGA GGAAATCTAC AGGGGTGGAT GTGTGGACTC AACCAGCCAA 
AGTCTAGTTC TGCTGCTCAT GACCCTTGGA CAGCAGGACG TCTCCAAAGT CCTGCTGGGA 
CCACTTTCCC CCTACACGAT AGAATTTTTG CGGCATTTGA AGAGTTTTTT CCAGGTTATG 
TTTAAAGTTG AAACCAAGCC TTGTGGTGAA GAACTCAAGG GCGGGGACAA AGTGCTAATG 
ACCTGTGTTG GTATTGGCTT CTCTAACCTC AGCAAGACCC TCAAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001013170.1
CDS	142..789
Translation	MPPGGGGEVLFSCPVRKVLKPVQLTDPGKIKRIRGMAYSVRVSPQMANRIVDSARGILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCAKLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKVETKPCGEELKGGDKVLMTCVGIGFSNLSKTLK

Target ORF information:

RefSeq Version	NM_001013152.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus RNA terminal phosphate cyclase-like 1 (Rcl1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001013152.1

ORF Insert Sequence:

ATGCCTCCTG GAGGAGGAGG TGAAGTGCTT TTCTCCTGCC CCGTGAGGAA GGTCCTGAAG 
CCTGTCCAGC TCACAGACCC AGGGAAAATC AAGCGCATCA GAGGAATGGC GTACTCAGTG 
CGTGTATCAC CTCAGATGGC AAACCGGATT GTGGATTCTG CAAGGGGCAT CCTCAACAAG 
TTCATCCCTG ACATCTATAT CTACACAGAT CACATGAAAG GCGTCAATTC TGGGAAGTCT 
CCAGGCTTCG GGCTGTCCCT GGTTGCAGAG ACTACCAACG GTACCTTCCT GAGTGCTGAA 
CTGGCCTCCA ATCCCCAGGG CCAGGGAGCA GCAGTGCTTC CTGAGGACCT CGGCAGGAAC 
TGTGCAAAGC TGCTGCTCGA GGAAATCTAC AGGGGTGGAT GTGTGGACTC AACCAGCCAA 
AGTCTAGTTC TGCTGCTCAT GACCCTTGGA CAGCAGGACG TCTCCAAAGT CCTGCTGGGA 
CCACTTTCCC CCTACACGAT AGAATTTTTG CGGCATTTGA AGAGTTTTTT CCAGGTTATG 
TTTAAAGTTG AAACCAAGCC TTGTGGTGAA GAACTCAAGG GCGGGGACAA AGTGCTAATG 
ACCTGTGTTG GTATTGGCTT CTCTAACCTC AGCAAGACCC TCAAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Rcl1 ( XM_006231208.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006231270.1 Rattus norvegicus RNA terminal phosphate cyclase-like 1 (Rcl1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa23997
Clone ID Related Accession (Same CDS sequence)	XM_006231208.3
Accession Version	XM_006231208.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	RNA 3'-terminal phosphate cyclase-like protein isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006231208.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACCC AGGCACACTC CCTCAGCTAC GCGGGGTGTA ACTTCCTGCG CCAGAGGCTG 
GTCCTGTCCA CCTTGAGCGG GCGCCCGGTC AAGATCCGCA GGATTCGGGC CAGAGACGAC 
AACCCGGGCC TCCGAGATTT TGAAGCAAGC TTTATAAGGC TGTTGGACAA AATAACTAAT 
GGTTCTCGAA TTGAAATCAA CCAAACAGGA ACAACCTTAT ACTACCAGCC TGGCCTCCTG 
TATGGCGGGT CCGTGGAGCA CGACTGCAGT GTCCTCCGTG GCATTGGCTA TTACCTGGAA 
GCTCTGCTTT GCCTGGCCCC GTTTATGAAA CACCCATTAA AAATTGTTCT TCGAGGAGTG 
ACCAATGACC AGGTTGATCC TTCGGTTGAT GTTCTTAAGG CAACAGCACT TCCTCTACTG 
AAACAGTTTG GGATTGATGG AGAGTCATTT GAGCTAAAGA TCTTGCGACG GGGAATGCCT 
CCTGGAGGAG GAGGTGAAGT GCTTTTCTCC TGCCCCGTGA GGAAGGTCCT GAAGCCTGTC 
CAGCTCACAG ACCCAGGGAA AATCAAGCGC ATCAGAGGAA TGGCGTACTC AGTGCGTGTA 
TCACCTCAGA TGGCAAACCG GATTGTGGAT TCTGCAAGGG GCATCCTCAA CAAGTTCATC 
CCTGACATCT ATATCTACAC AGATCACATG AAAGGCGTCA ATTCTGGGAA GTCTCCAGGC 
TTCGGGCTGT CCCTGGTTGC AGAGACTACC AACGGTACCT TCCTGAGTGC TGAACTGGCC 
TCCAATCCCC AGGGCCAGGG AGCAGCAGTG CTTCCTGAGG ACCTCGGCAG GAACTGTGCA 
AAGCTGCTGC TCGAGGAAAT CTACAGGGGT GGATGTGTGG ACTCAACCAG CCAAAGTCTA 
GTTCTGCTGC TCATGACCCT TGGACAGCAG GACGTCTCCA AAGTCCTGCT GGGACCACTT 
TCCCCCTACA CGATAGAATT TTTGCGGCAT TTGAAGAGTT TTTTCCAGGT TATGTTTAAA 
GTTGAAACCA AGCCTTGTGG TGAAGAACTC AAGGGCGGGG ACAAAGTGCT AATGACCTGT 
GTTGGTATTG GCTTCTCTAA CCTCAGCAAG ACCCTCAAGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006231270.1
CDS	117..1238
Translation	MATQAHSLSYAGCNFLRQRLVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLEALLCLAPFMKHPLKIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKILRRGMPPGGGGEVLFSCPVRKVLKPVQLTDPGKIKRIRGMAYSVRVSPQMANRIVDSARGILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCAKLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKVETKPCGEELKGGDKVLMTCVGIGFSNLSKTLK

Target ORF information:

RefSeq Version	XM_006231208.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus RNA terminal phosphate cyclase-like 1 (Rcl1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006231208.3

ORF Insert Sequence:

ATGGCGACCC AGGCACACTC CCTCAGCTAC GCGGGGTGTA ACTTCCTGCG CCAGAGGCTG 
GTCCTGTCCA CCTTGAGCGG GCGCCCGGTC AAGATCCGCA GGATTCGGGC CAGAGACGAC 
AACCCGGGCC TCCGAGATTT TGAAGCAAGC TTTATAAGGC TGTTGGACAA AATAACTAAT 
GGTTCTCGAA TTGAAATCAA CCAAACAGGA ACAACCTTAT ACTACCAGCC TGGCCTCCTG 
TATGGCGGGT CCGTGGAGCA CGACTGCAGT GTCCTCCGTG GCATTGGCTA TTACCTGGAA 
GCTCTGCTTT GCCTGGCCCC GTTTATGAAA CACCCATTAA AAATTGTTCT TCGAGGAGTG 
ACCAATGACC AGGTTGATCC TTCGGTTGAT GTTCTTAAGG CAACAGCACT TCCTCTACTG 
AAACAGTTTG GGATTGATGG AGAGTCATTT GAGCTAAAGA TCTTGCGACG GGGAATGCCT 
CCTGGAGGAG GAGGTGAAGT GCTTTTCTCC TGCCCCGTGA GGAAGGTCCT GAAGCCTGTC 
CAGCTCACAG ACCCAGGGAA AATCAAGCGC ATCAGAGGAA TGGCGTACTC AGTGCGTGTA 
TCACCTCAGA TGGCAAACCG GATTGTGGAT TCTGCAAGGG GCATCCTCAA CAAGTTCATC 
CCTGACATCT ATATCTACAC AGATCACATG AAAGGCGTCA ATTCTGGGAA GTCTCCAGGC 
TTCGGGCTGT CCCTGGTTGC AGAGACTACC AACGGTACCT TCCTGAGTGC TGAACTGGCC 
TCCAATCCCC AGGGCCAGGG AGCAGCAGTG CTTCCTGAGG ACCTCGGCAG GAACTGTGCA 
AAGCTGCTGC TCGAGGAAAT CTACAGGGGT GGATGTGTGG ACTCAACCAG CCAAAGTCTA 
GTTCTGCTGC TCATGACCCT TGGACAGCAG GACGTCTCCA AAGTCCTGCT GGGACCACTT 
TCCCCCTACA CGATAGAATT TTTGCGGCAT TTGAAGAGTT TTTTCCAGGT TATGTTTAAA 
GTTGAAACCA AGCCTTGTGG TGAAGAACTC AAGGGCGGGG ACAAAGTGCT AATGACCTGT 
GTTGGTATTG GCTTCTCTAA CCTCAGCAAG ACCCTCAAGT GA