LOC103690108 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103690108
Entrez Gene ID	103690108
Full Name	class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like
General protein information	Preferred Names class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like Names LOW QUALITY PROTEIN: RT1 class I histocompatibility antigen, AA alpha chain-like
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 20 Map Location: 20p12

mRNA and Protein(s)

mRNA	Protein	Name
XM_008772769.2	XP_008770991.2	LOW QUALITY PROTEIN: RT1 class I histocompatibility antigen, AA alpha chain-like

Pathways from BioSystems
Gene Ontology

The following LOC103690108 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103690108 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa60208	XM_008772769.2 Latest version!	Rattus norvegicus class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like (LOC103690108), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103690108 ( XM_008772769.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008770991.2 Rattus norvegicus class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like (LOC103690108), mRNA.

Price & Availability↑

CloneID	ORa60208
Clone ID Related Accession (Same CDS sequence)	XM_008772769.2
Accession Version	XM_008772769.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2052bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	LOW QUALITY PROTEIN: RT1 class I histocompatibility antigen, AA alpha chain-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) and transcript sequence (Y08530.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008772769.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases frameshifts :: corrected 1 indel internal stop codons :: corrected 1 genomic stop codon assembly gap :: added 62 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGACAAACA GGGCTCTGCC CCACAGCCCA AGGTCCTTCT GCCCGGATAC TGATGACGCG 
CTGGCAATTC TCACTTCCAA GGGCTGCCGC GATCCCTGTG AACCAATCAG CGTCGGCCAG 
GATTATAAAG TCCACGCAGC CCGCGGGACT CAGCGGCGTC CGGGATCTCG ATTGGGGGCG 
ATGGCACCCC GCACGCTGCT CCTGCTGCTG GCGGCCGCCC TGGCCCCGAC CCAGACCCAG 
GCGGGCTCAC ACTCGCTGCG GTATTTCGAC ATCGCTGTGT CCCGGCCCGG CCTCGGGGAG 
CCCCGGTTCA TTATCGTCGG CTACGTGGAC GACAGGGAGG TCATGCGCTT CGACAGCGAC 
GCGGAGAATC CGAGGATGAA GCCTCGGGCG CGGTGGATGG AGCGGGAGGG GCCGGAGTAT 
TGGGAGCGGC AGACACGGAA AGTCAAGGAA AAGGAGCAGA TTTTCCGAGA CAACCTGAGG 
ACCCTGCTCC GCTACTACAA CCAGAGCGAG GGCGGCTCTC ACACCGTCCA GAGATTGTCT 
GGCTGTGACG TGGGGTCGGA CGGGAGCCTC CTCCGCGGGT ATAATCAGCA CGCCTACGAT 
GGCCGCGATT ACATCGCCCT GAACGAAGAC CTGAAAACGT GGACGGCGGC GGACACAGCG 
GCGCAGATCA CCAAAAACAA GTGGGAACGG GATGGTGAGG CAGAGAGACG CAGGGCCTAC 
CTGGAGGGCG AGTGTGTGGA GTGGCTCCGC AGTTACCTGG CACCCAGGAA GGAGACGCTG 
CTGCGCTCAG TGTCAGGTCC TTCTGCCCGG ATACTGATGA CGCGCTGGCA ATTCTCACTC 
CTATTTGGTG CTGTGAACCC GGTGACCCAA TCAGCGTCGC CCCAGACACT AGTCCGTAAA 
CTCCACGCAG CCCGCGGGAC TCAGCGGCGT CCGGGATCTC AGATGGGGGC GATGGCACCG 
CGCACGCTGC TCCTGCTGCT GGCGGCCGCC CTGGCCCCGA CGCAGACTCG CGCGGGCTCA 
CACTCGCTGC GGTATTTCGT CACCGCCATA TCCGGGCCCG GCCTCGGGGA GCCCCGATTC 
ATGGAAGTCG GCTACGTGGA CGGCACGGAG TTCGTGCGCT ACGACAGCGA CGCAAAGAAT 
CCGGGGATGG AGCCGCGGGC GAGGTGGATG GAGCGGGAGG GGCGGGAGTA TTGGGAGCGG 
GAGACACGGA GAGTCAAGGA AAACGAGCAG TTGTTCCGAG GGAACCTGAG GACCCTGCTT 
GGCTACTACA ACCAGAGCGA GGGCGGCTCT CACACCATCC AGTGGATGTC TGGCTGTGAC 
GTGGGGTCGG ACGGGAGCCT CCTCCGCGGG TATGATCAGT TCGCCTACGA CGGCCGCGAT 
TACATCGTCC TGAACGAAGA CCTGAAAACG TGGACGGCGG CGGACACGGC GGCACGGATC 
ACCCGGAACA AGTGGGATCG GGCTGGTGTT GCAGAGAGAC ACAAGGCCTA CCTGGAGGGC 
AAGTGCTTGG AGTCGCTCCT CAGATACCTG GAGCTCGGGA AGGAGACGCT GCTGCGCTCA 
GATCCCCCAA AGGCACATGT GACCCTTCAC CCCAGACCTG AAGGTGATGT CACCCTGAGG 
TGCTGGGCCC TGGGCTTCTA CCCTGCTGGC ATCTCCCTGA CCTGGCAGTT GAATGGGGAG 
GACCTGACCC AGGACATGGA GCTTGTGGAG ACCAGGCCTG CAGGGGATGG AACCTTCCAA 
AAGTGGGGTT GCCTTTTGTA GACCCTGAGT NTGGTCAGGG CTGAGAGCTG GGGTCATGAC 
CCCCACCTTC ATTTCCTGTA CCTGTCCTTC CCAGAGCCTT CTCCATCGAC CGACTCCAAC 
ATGGAAACCT ATGTCATTTA TGTCATCCTT GGAGCTGTGG CCATCATTGC AGCTGTGATC 
ATTGTAGCTG TGGTGGCTGT TGTGATGAAG AGGAGGAGAA ACACAGGTGG AAAAGTAGGA 
GTCTACGCCC CTGCTCCAAG CAGGGACAGC TCTGAGAGCT CTGATGTGTC TCTCTCAGAT 
TGTAAAGCAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008770991.2
CDS	16..2067
Translation	MTNRALPHSPRSFCPDTDDALAILTSKGCRDPCEPISVGQDYKVHAARGTQRRPGSRLGAMAPRTLLLLLAAALAPTQTQAGSHSLRYFDIAVSRPGLGEPRFIIVGYVDDREVMRFDSDAENPRMKPRARWMEREGPEYWERQTRKVKEKEQIFRDNLRTLLRYYNQSEGGSHTVQRLSGCDVGSDGSLLRGYNQHAYDGRDYIALNEDLKTWTAADTAAQITKNKWERDGEAERRRAYLEGECVEWLRSYLAPRKETLLRSVSGPSARILMTRWQFSLLFGAVNPVTQSASPQTLVRKLHAARGTQRRPGSQMGAMAPRTLLLLLAAALAPTQTRAGSHSLRYFVTAISGPGLGEPRFMEVGYVDGTEFVRYDSDAKNPGMEPRARWMEREGREYWERETRRVKENEQLFRGNLRTLLGYYNQSEGGSHTIQWMSGCDVGSDGSLLRGYDQFAYDGRDYIVLNEDLKTWTAADTAARITRNKWDRAGVAERHKAYLEGKCLESLLRYLELGKETLLRSDPPKAHVTLHPRPEGDVTLRCWALGFYPAGISLTWQLNGEDLTQDMELVETRPAGDGTFQKWGCLL*TLSnullVRAESWGHDPHLHFLYLSFPEPSPSTDSNMETYVIYVILGAVAIIAAVIIVAVVAVVMKRRRNTGGKVGVYAPAPSRDSSESSDVSLSDCKA

Target ORF information:

RefSeq Version	XM_008772769.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like (LOC103690108), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008772769.2

ORF Insert Sequence:

ATGACAAACA GGGCTCTGCC CCACAGCCCA AGGTCCTTCT GCCCGGATAC TGATGACGCG 
CTGGCAATTC TCACTTCCAA GGGCTGCCGC GATCCCTGTG AACCAATCAG CGTCGGCCAG 
GATTATAAAG TCCACGCAGC CCGCGGGACT CAGCGGCGTC CGGGATCTCG ATTGGGGGCG 
ATGGCACCCC GCACGCTGCT CCTGCTGCTG GCGGCCGCCC TGGCCCCGAC CCAGACCCAG 
GCGGGCTCAC ACTCGCTGCG GTATTTCGAC ATCGCTGTGT CCCGGCCCGG CCTCGGGGAG 
CCCCGGTTCA TTATCGTCGG CTACGTGGAC GACAGGGAGG TCATGCGCTT CGACAGCGAC 
GCGGAGAATC CGAGGATGAA GCCTCGGGCG CGGTGGATGG AGCGGGAGGG GCCGGAGTAT 
TGGGAGCGGC AGACACGGAA AGTCAAGGAA AAGGAGCAGA TTTTCCGAGA CAACCTGAGG 
ACCCTGCTCC GCTACTACAA CCAGAGCGAG GGCGGCTCTC ACACCGTCCA GAGATTGTCT 
GGCTGTGACG TGGGGTCGGA CGGGAGCCTC CTCCGCGGGT ATAATCAGCA CGCCTACGAT 
GGCCGCGATT ACATCGCCCT GAACGAAGAC CTGAAAACGT GGACGGCGGC GGACACAGCG 
GCGCAGATCA CCAAAAACAA GTGGGAACGG GATGGTGAGG CAGAGAGACG CAGGGCCTAC 
CTGGAGGGCG AGTGTGTGGA GTGGCTCCGC AGTTACCTGG CACCCAGGAA GGAGACGCTG 
CTGCGCTCAG TGTCAGGTCC TTCTGCCCGG ATACTGATGA CGCGCTGGCA ATTCTCACTC 
CTATTTGGTG CTGTGAACCC GGTGACCCAA TCAGCGTCGC CCCAGACACT AGTCCGTAAA 
CTCCACGCAG CCCGCGGGAC TCAGCGGCGT CCGGGATCTC AGATGGGGGC GATGGCACCG 
CGCACGCTGC TCCTGCTGCT GGCGGCCGCC CTGGCCCCGA CGCAGACTCG CGCGGGCTCA 
CACTCGCTGC GGTATTTCGT CACCGCCATA TCCGGGCCCG GCCTCGGGGA GCCCCGATTC 
ATGGAAGTCG GCTACGTGGA CGGCACGGAG TTCGTGCGCT ACGACAGCGA CGCAAAGAAT 
CCGGGGATGG AGCCGCGGGC GAGGTGGATG GAGCGGGAGG GGCGGGAGTA TTGGGAGCGG 
GAGACACGGA GAGTCAAGGA AAACGAGCAG TTGTTCCGAG GGAACCTGAG GACCCTGCTT 
GGCTACTACA ACCAGAGCGA GGGCGGCTCT CACACCATCC AGTGGATGTC TGGCTGTGAC 
GTGGGGTCGG ACGGGAGCCT CCTCCGCGGG TATGATCAGT TCGCCTACGA CGGCCGCGAT 
TACATCGTCC TGAACGAAGA CCTGAAAACG TGGACGGCGG CGGACACGGC GGCACGGATC 
ACCCGGAACA AGTGGGATCG GGCTGGTGTT GCAGAGAGAC ACAAGGCCTA CCTGGAGGGC 
AAGTGCTTGG AGTCGCTCCT CAGATACCTG GAGCTCGGGA AGGAGACGCT GCTGCGCTCA 
GATCCCCCAA AGGCACATGT GACCCTTCAC CCCAGACCTG AAGGTGATGT CACCCTGAGG 
TGCTGGGCCC TGGGCTTCTA CCCTGCTGGC ATCTCCCTGA CCTGGCAGTT GAATGGGGAG 
GACCTGACCC AGGACATGGA GCTTGTGGAG ACCAGGCCTG CAGGGGATGG AACCTTCCAA 
AAGTGGGGTT GCCTTTTGTA GACCCTGAGT NTGGTCAGGG CTGAGAGCTG GGGTCATGAC 
CCCCACCTTC ATTTCCTGTA CCTGTCCTTC CCAGAGCCTT CTCCATCGAC CGACTCCAAC 
ATGGAAACCT ATGTCATTTA TGTCATCCTT GGAGCTGTGG CCATCATTGC AGCTGTGATC 
ATTGTAGCTG TGGTGGCTGT TGTGATGAAG AGGAGGAGAA ACACAGGTGG AAAAGTAGGA 
GTCTACGCCC CTGCTCCAAG CAGGGACAGC TCTGAGAGCT CTGATGTGTC TCTCTCAGAT 
TGTAAAGCAT GA