Snrpe cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Snrpe
Entrez Gene ID	100360682
Full Name	small nuclear ribonucleoprotein polypeptide E
General protein information	Preferred Names small nuclear ribonucleoprotein polypeptide E Names small nuclear ribonucleoprotein E
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 13 Map Location: 13q13

mRNA and Protein(s)

mRNA	Protein	Name
NM_001271237.1	NP_001258166.1	small nuclear ribonucleoprotein E

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	SNRPE	XP_003640259.1
Bos taurus (cattle)	SNRPE	NP_001076928.1
Mus musculus (house mouse)	Snrpe	NP_033253.1
Gallus gallus (chicken)	SNRPE	NP_990581.1
Danio rerio (zebrafish)	snrpe	NP_957298.1
Drosophila melanogaster (fruit fly)	SmE	NP_609162.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP010440	XP_311506.3
Caenorhabditis elegans (roundworm)	snr-6	NP_499620.1
Kluyveromyces lactis	KLLA0A02299g	XP_451102.1
Magnaporthe oryzae (rice blast fungus)	MGG_01450	XP_003714403.1
Neurospora crassa	NCU06354	XP_962388.1
Oryza sativa (rice)	Os02g0126700	NP_001045754.1
Rattus norvegicus (Norway rat)	Snrpe	NP_001258166.1
Saccharomyces cerevisiae (baker's yeast)	SME1	NP_014802.3
Arabidopsis thaliana (thale cress)	AT4G30330	NP_567844.1
Arabidopsis thaliana (thale cress)	AT2G18740	NP_179464.1
Xenopus tropicalis (tropical clawed frog)	snrpe	NP_001005147.1
Schizosaccharomyces pombe (fission yeast)	sme1	NP_595724.1
Pan troglodytes (chimpanzee)	SNRPEL1	XP_520443.1
Eremothecium gossypii	AGOS_AAR116W	NP_982658.1

Gene Ontology
Bibliography

Related articles in PubMed

Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation.
Bertram K, Agafonov DE, Dybkov O, Haselbach D, Leelaram MN, Will CL, Urlaub H, Kastner B, L?hrmann R, Stark H
Cell170(4)701-713.e11(2017 Aug)

Cryo-EM structure of a human spliceosome activated for step 2 of splicing.
Bertram K, Agafonov DE, Liu WT, Dybkov O, Will CL, Hartmuth K, Urlaub H, Kastner B, Stark H, L?hrmann R
Nature542(7641)318-323(2017 02)

Molecular architecture of the human U4/U6.U5 tri-snRNP.
Agafonov DE, Kastner B, Dybkov O, Hofele RV, Liu WT, Urlaub H, L?hrmann R, Stark H
Science (New York, N.Y.)351(6280)1416-20(2016 Mar)

Crystal structure of human U1 snRNP, a small nuclear ribonucleoprotein particle, reveals the mechanism of 5' splice site recognition.
Kondo Y, Oubridge C, van Roon AM, Nagai K
eLife4(2015 Jan)

Low-molecular-mass secretome profiling identifies C-C motif chemokine 5 as a potential plasma biomarker and therapeutic target for nasopharyngeal carcinoma.
Lin SJ, Chang KP, Hsu CW, Chi LM, Chien KY, Liang Y, Tsai MH, Lin YT, Yu JS
Journal of proteomics94186-201(2013 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Snrpe gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Snrpe cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa10694	NM_001271237.1 Latest version!	Rattus norvegicus small nuclear ribonucleoprotein polypeptide E (Snrpe), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Snrpe ( NM_001271237.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001258166.1 Rattus norvegicus small nuclear ribonucleoprotein polypeptide E (Snrpe), mRNA.

Price & Availability↑

CloneID	ORa10694
Clone ID Related Accession (Same CDS sequence)	NM_001271237.1
Accession Version	NM_001271237.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 279bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-18
Organism	Rattus norvegicus(Norway rat)
Product	small nuclear ribonucleoprotein E
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FQ211122.1. On or before Sep 9, 2012 this sequence version replaced XM_002728006.2, XM_002724889.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: FQ211122.1, BF555033.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END##

ATGGCGTACC GCGGCCAGGG CCAGAAGGTG CAGAAGGTGA TGGTGCAGCC CATCAACCTT 
ATCTTCAGAT ACTTGCAAAA TAGATCTCGA ATTCAGGTGT GGCTGTATGA ACAAGTGAAT 
ATGCGGATAG AGGGTTGTAT TATTGGCTTT GATGAGTACA TGAACCTCGT ATTAGATGAT 
GCAGAAGAAA TTCATTCTAA AACAAAGTCA AGAAAACAAC TGGGTCGGAT CATGCTCAAA 
GGAGATAATA TTACTCTGCT CCAAAGCGTT TCCAACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001258166.1
CDS	16..294
Translation	MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN

Target ORF information:

RefSeq Version	NM_001271237.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus small nuclear ribonucleoprotein polypeptide E (Snrpe), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001271237.1

ORF Insert Sequence:

ATGGCGTACC GCGGCCAGGG CCAGAAGGTG CAGAAGGTGA TGGTGCAGCC CATCAACCTT 
ATCTTCAGAT ACTTGCAAAA TAGATCTCGA ATTCAGGTGT GGCTGTATGA ACAAGTGAAT 
ATGCGGATAG AGGGTTGTAT TATTGGCTTT GATGAGTACA TGAACCTCGT ATTAGATGAT 
GCAGAAGAAA TTCATTCTAA AACAAAGTCA AGAAAACAAC TGGGTCGGAT CATGCTCAAA 
GGAGATAATA TTACTCTGCT CCAAAGCGTT TCCAACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation.
Cell170(4)701-713.e11(2017 Aug)
Bertram K,Agafonov DE,Dybkov O,Haselbach D,Leelaram MN,Will CL,Urlaub H,Kastner B,L?hrmann R,Stark H

Cryo-EM structure of a human spliceosome activated for step 2 of splicing.
Nature542(7641)318-323(2017 02)
Bertram K,Agafonov DE,Liu WT,Dybkov O,Will CL,Hartmuth K,Urlaub H,Kastner B,Stark H,L?hrmann R

Molecular architecture of the human U4/U6.U5 tri-snRNP.
Science (New York, N.Y.)351(6280)1416-20(2016 Mar)
Agafonov DE,Kastner B,Dybkov O,Hofele RV,Liu WT,Urlaub H,L?hrmann R,Stark H

Crystal structure of human U1 snRNP, a small nuclear ribonucleoprotein particle, reveals the mechanism of 5' splice site recognition.
eLife4(2015 Jan)
Kondo Y,Oubridge C,van Roon AM,Nagai K

Low-molecular-mass secretome profiling identifies C-C motif chemokine 5 as a potential plasma biomarker and therapeutic target for nasopharyngeal carcinoma.
Journal of proteomics94186-201(2013 Dec)
Lin SJ,Chang KP,Hsu CW,Chi LM,Chien KY,Liang Y,Tsai MH,Lin YT,Yu JS