LOC108413328 cDNA ORF clone, Pygocentrus nattereri(red-bellied piranha)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108413328
Entrez Gene ID	108413328
Full Name	E3 ubiquitin-protein ligase TRIM39-like
Gene Type	protein-coding
Organism	Pygocentrus nattereri(red-bellied piranha)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017685797.1	XP_017541286.1	E3 ubiquitin-protein ligase TRIM39-like

Pathways from BioSystems
Gene Ontology

The following LOC108413328 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108413328 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPy55056	XM_017685797.1 Latest version!	Pygocentrus nattereri E3 ubiquitin-protein ligase TRIM39-like (LOC108413328), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108413328 ( XM_017685797.1 ) cDNA ORF clone, Pygocentrus nattereri(red-bellied piranha) -> XP_017541286.1 Pygocentrus nattereri E3 ubiquitin-protein ligase TRIM39-like (LOC108413328), mRNA.

Price & Availability↑

CloneID	OPy55056
Clone ID Related Accession (Same CDS sequence)	XM_017685797.1
Accession Version	XM_017685797.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1632bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-08-01
Organism	Pygocentrus nattereri(red-bellied piranha)
Product	E3 ubiquitin-protein ligase TRIM39-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016244913.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pygocentrus nattereri Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END##

ATGGCTTCCT CCAGCAGTGT CCTGTCTGAA GATCAGCTCC AGTGCTCCAT CTGTCTGGAC 
GTGTTCACTG ATCCAGTCAC GACTCCATGT GGACACAACT TCTGCAGGGT CTGTCTCAAA 
GAGTGCTGGG ACAGCAGTTC ACGCTGCAAG TGTCCACTTT GCATGGAGGA ATTCTTCAGA 
AGACCAGAGC TACGTGTGAA TACGTTCATC TCTGGACTGG CTACTCAGTT CAAGAAGTCA 
GTTCAGGTGA AATCCAGCAG AGCTCCAGAG AAGCGTCCAT CCAAAGTTAA GAAAGTTCTG 
TGTGACTACT GTAGTGAGGG AGCAGTAAAG TCCTGTCTGG ACTGTGGAGT CTCTTACTGT 
GAGACTCATC TGATGCCTCA TAAAACCGCA GTTAAACTCA AGAAGCACAA AATGATGGAC 
CCTGTGGAGA ACCTGGAGGA CTACAGCTGC CAGAAACATG AGAGACCCCT GGAGCTGTTC 
TGTAGAGACG ACCAGATGTA TGTATGTCAG TTCTGCACTG AAACAGACCA CAAGGCTCAC 
AGCACTGTTC CTATAGAGGA GGAGGGTCGA GAGAAGAAGA CTAAGCTGAT GAAGACACAA 
GTAGAAGTTC AGCAGATGAT CCAAGACCGA CTGAAGAAGA CTGAGGAAAT CAAACAATCT 
GTAAAACTCA ATAAAAAAAG CTCAGAGAAG GAGAAAGCAG ACAGTGTGGA GGTCTTCAGA 
GCTCTGCTGC ACTGCATTGA GAGAAGCCAG GCGGAGCTGC TTGAGGTGAT GGAGGAGAAG 
CAGAAAGCAG CAGAGAGGCA GGCTGAAGAG TTCATTAAAG AGCTGGAGCA GGAAATCACT 
GAGCTAAAGA GGAGAGACAC TGAGCTGGAG CAGCTCTCCC ACACTGAGGA CCACCTCCAC 
CTCCTACAGG TTTACCCGTC CCTCTGCAGC CCTCCACCCA CCAAGAACTG GACTGACGTC 
AGGATTAACA CTCATCTGAA GTTGGAGACT CTGAGGAGAG CTCTGATTCA GCTTCAGGAA 
GAGATCAATA AGGAGATGGA GAACCTTCCT GAGATCAAAC TGAAGAGAAT TCAACAATAT 
GTAGTGGATG TGACTCTGGA TCCTGACACT GCTCATCCCT CCCTCGTCAT GTCTGATGAT 
GGGAAACAAG TGCGAGATGG AGACACAGAA GAGAAAGTTC CTGACACCCC AGAGAGGTTT 
GATGAATGTG TCTCTGTGCT GGGAAAGGAG GGGTTCTCCT CAGGGAGATT TTACTATGAG 
GTTCAGGTCA GCGGGAAGAG TGAGTGGGAA TTAGGAGTGA CCACAAAGTC CAGTAACAGG 
AAGGGAGAGA TTACACTGAG TCCTGAGAAC GGGTACTGGA CTGTGTGGCT GAGAAACAAA 
ACTCGATATA AAGCTCTGGA CACTCGCCCT GTCCTTCTCT CCTTGAAACA GGCTCCCCAG 
AAGGTGGGGG TGTTTGTGGA TTATGAGGAG GGTCTGGTCT CCTTCTATGA CGTTGAGGCC 
AGGTCTCATA TCTACTCTTT CACTGGTCAG TCTTTCACTG AGAAACTCTA TCCATACTTC 
AGCCCTGGTC TCAATAATGA AGGGAAAAAC TCAGCAACGC TGATCATCAT GCCTCTTGAA 
CTTTATAACT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017541286.1
CDS	132..1763
Translation	MASSSSVLSEDQLQCSICLDVFTDPVTTPCGHNFCRVCLKECWDSSSRCKCPLCMEEFFRRPELRVNTFISGLATQFKKSVQVKSSRAPEKRPSKVKKVLCDYCSEGAVKSCLDCGVSYCETHLMPHKTAVKLKKHKMMDPVENLEDYSCQKHERPLELFCRDDQMYVCQFCTETDHKAHSTVPIEEEGREKKTKLMKTQVEVQQMIQDRLKKTEEIKQSVKLNKKSSEKEKADSVEVFRALLHCIERSQAELLEVMEEKQKAAERQAEEFIKELEQEITELKRRDTELEQLSHTEDHLHLLQVYPSLCSPPPTKNWTDVRINTHLKLETLRRALIQLQEEINKEMENLPEIKLKRIQQYVVDVTLDPDTAHPSLVMSDDGKQVRDGDTEEKVPDTPERFDECVSVLGKEGFSSGRFYYEVQVSGKSEWELGVTTKSSNRKGEITLSPENGYWTVWLRNKTRYKALDTRPVLLSLKQAPQKVGVFVDYEEGLVSFYDVEARSHIYSFTGQSFTEKLYPYFSPGLNNEGKNSATLIIMPLELYN

Target ORF information:

RefSeq Version	XM_017685797.1
Organism	Pygocentrus nattereri(red-bellied piranha)
Definition	Pygocentrus nattereri E3 ubiquitin-protein ligase TRIM39-like (LOC108413328), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017685797.1

ORF Insert Sequence:

ATGGCTTCCT CCAGCAGTGT CCTGTCTGAA GATCAGCTCC AGTGCTCCAT CTGTCTGGAC 
GTGTTCACTG ATCCAGTCAC GACTCCATGT GGACACAACT TCTGCAGGGT CTGTCTCAAA 
GAGTGCTGGG ACAGCAGTTC ACGCTGCAAG TGTCCACTTT GCATGGAGGA ATTCTTCAGA 
AGACCAGAGC TACGTGTGAA TACGTTCATC TCTGGACTGG CTACTCAGTT CAAGAAGTCA 
GTTCAGGTGA AATCCAGCAG AGCTCCAGAG AAGCGTCCAT CCAAAGTTAA GAAAGTTCTG 
TGTGACTACT GTAGTGAGGG AGCAGTAAAG TCCTGTCTGG ACTGTGGAGT CTCTTACTGT 
GAGACTCATC TGATGCCTCA TAAAACCGCA GTTAAACTCA AGAAGCACAA AATGATGGAC 
CCTGTGGAGA ACCTGGAGGA CTACAGCTGC CAGAAACATG AGAGACCCCT GGAGCTGTTC 
TGTAGAGACG ACCAGATGTA TGTATGTCAG TTCTGCACTG AAACAGACCA CAAGGCTCAC 
AGCACTGTTC CTATAGAGGA GGAGGGTCGA GAGAAGAAGA CTAAGCTGAT GAAGACACAA 
GTAGAAGTTC AGCAGATGAT CCAAGACCGA CTGAAGAAGA CTGAGGAAAT CAAACAATCT 
GTAAAACTCA ATAAAAAAAG CTCAGAGAAG GAGAAAGCAG ACAGTGTGGA GGTCTTCAGA 
GCTCTGCTGC ACTGCATTGA GAGAAGCCAG GCGGAGCTGC TTGAGGTGAT GGAGGAGAAG 
CAGAAAGCAG CAGAGAGGCA GGCTGAAGAG TTCATTAAAG AGCTGGAGCA GGAAATCACT 
GAGCTAAAGA GGAGAGACAC TGAGCTGGAG CAGCTCTCCC ACACTGAGGA CCACCTCCAC 
CTCCTACAGG TTTACCCGTC CCTCTGCAGC CCTCCACCCA CCAAGAACTG GACTGACGTC 
AGGATTAACA CTCATCTGAA GTTGGAGACT CTGAGGAGAG CTCTGATTCA GCTTCAGGAA 
GAGATCAATA AGGAGATGGA GAACCTTCCT GAGATCAAAC TGAAGAGAAT TCAACAATAT 
GTAGTGGATG TGACTCTGGA TCCTGACACT GCTCATCCCT CCCTCGTCAT GTCTGATGAT 
GGGAAACAAG TGCGAGATGG AGACACAGAA GAGAAAGTTC CTGACACCCC AGAGAGGTTT 
GATGAATGTG TCTCTGTGCT GGGAAAGGAG GGGTTCTCCT CAGGGAGATT TTACTATGAG 
GTTCAGGTCA GCGGGAAGAG TGAGTGGGAA TTAGGAGTGA CCACAAAGTC CAGTAACAGG 
AAGGGAGAGA TTACACTGAG TCCTGAGAAC GGGTACTGGA CTGTGTGGCT GAGAAACAAA 
ACTCGATATA AAGCTCTGGA CACTCGCCCT GTCCTTCTCT CCTTGAAACA GGCTCCCCAG 
AAGGTGGGGG TGTTTGTGGA TTATGAGGAG GGTCTGGTCT CCTTCTATGA CGTTGAGGCC 
AGGTCTCATA TCTACTCTTT CACTGGTCAG TCTTTCACTG AGAAACTCTA TCCATACTTC 
AGCCCTGGTC TCAATAATGA AGGGAAAAAC TCAGCAACGC TGATCATCAT GCCTCTTGAA 
CTTTATAACT GA