POPTR_0001s01720g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s01720g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s01720g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa02874 XM_006368273.1
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0001s01720g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OPa02873 XM_006368272.1
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0001s01720g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
$609.00
OPa420894 XM_024600726.1
Latest version!
Populus trichocarpa uncharacterized LOC18094104 (LOC18094104), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa02874
    Clone ID Related Accession (Same CDS sequence) XM_006368273.1
    Accession Version XM_006368273.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1590bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). COMPLETENESS: incomplete on the 3' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAAGAAG GGGAAGGGGA AGGGTTTGAA GAATGGGACG CTGATTTCTT AGATCAGTTA 
    ATCCAAGTCG AGGAACTTGC TCTCTCTTCT CAACTCCCTT CCTCATCCGA ATCTCCCCTA
    CCTCCCACCA CCACCACCAC CAAACTCCCC TACCTCCCAC CACCGCAACA ACTGCAACAT
    GACTGTCAAA ATAATTCCAT CAGTTACTCT CCTCCACGTG AACTCTCTCA AAGACCAATT
    GAGTTCAGCA TCAACAACAA CAGCAGCAGC ATAACATTTG ATCGTTTTTC TAACGGATTC
    TCGCATTCGG CTCCTTCTAC TTCTGCCTCC AAACATAATG CCAAAGACCT AGAAATTGAT
    CGCCTAAAGG AACAAGAATG CTTTGAACTT AAGAAGGAGA GAAGGAAAAG AGACGAACAA
    ATTAAATCTT TATATGCCGA TAGTGAAGAA AAAGATGTGC ATATTCACAG CCGAAAAAAG
    ACAAACTTGG AGCGTGGGGA TCACAGCAAG GATGCTCATG GAATTTCCCA GCACTCTGAA
    AGTGCAAAAC CTTTGGAGGG TCAGATTGAT ATAGCTTCTA CATCCAAGGC CATAGGAGTT
    CAGACAGAGA GAAGCATTGA TTTTACAAAA GTAGAATTGA AGAATGATTC TCCTTCTCAC
    CCTGAACTTT CCGAAACGTT GCTTGGAATC TGGGGCTCCA CAACTGAACA ACAATTGGGA
    AGAAATCTGA TCTCCAAGTT GTTCATGATG TGCCCAACAG ATTTTCAGGT TCTTTTTGGG
    TGCATGAGCA TGAATATGTC TTCCAAAGTA CAAATGGACT GTTTGCAAGA TGAAAGCTCC
    TCTCATGCAG CTTTGCAGTA TCGTATGTGC TCTTTTCCAG CATCTGAAGC AGCAAAAGTT
    TCTCATCTGT ATTCTGTATT GACGAAGATC AATAATGGAG TGCTACAGTT GGAAGCTCTG
    TTTAGATCTT TACTTGATTT TTGTGATGTC ACACATGTTG CCATTCTTTC TAGTTCTTTG
    CATATACTGC TAGCCTTTTT AAAGCAACTA TTGAGTTTGG GAGCAAAATT GGGAGGGGAC
    AATATCAAGA TTGAGGGACT TTGCTCTGGG GACAGCCTTG AAGGCCAGGA TCTGTTTAGT
    ATGATCAGCT ATGAGGCATC AAATGTGGGC TGTAGTTCGC TTGGGATTAA ATCTTTTTAT
    CCAAAACACC TGTGCAAGAA ACGGTGCTGG AATGCTGAGA TTTCCTTGCT GCTTTCTTCT
    GTAAACTGGG TTTTGTTGTT AGAAACGATG CTTCAGATTG CTGTGAGAAA TACAGAAGAA
    TGTGTGAGAC TGGAGGCAGT CTCTATCATG AATGTGATTC TGATGAGTAG TAATGCTCAA
    ACAGAGATGG AAAAGTTTGG TCAATCACCA ATTTTTGAAA GCATAGCACA ATTGCTAAAA
    AGGGAAGCTG GCCTACGTGT GCAAAAGGAA GCTCTCCATC TTCTATTCTT GTTGCTAAAT
    TGTTGTATCC AACTTGATCT GCTCTCCCCA TTTGATTATG ATGTCTATCT TAGCTCCATT
    AGTTTGTTAA CTAGCTTGGT CTCTATTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006368335.1
    CDS20..1609
    Translation

    Target ORF information:

    RefSeq Version XM_006368273.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s01720g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006368273.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAAGAAG GGGAAGGGGA AGGGTTTGAA GAATGGGACG CTGATTTCTT AGATCAGTTA 
    ATCCAAGTCG AGGAACTTGC TCTCTCTTCT CAACTCCCTT CCTCATCCGA ATCTCCCCTA
    CCTCCCACCA CCACCACCAC CAAACTCCCC TACCTCCCAC CACCGCAACA ACTGCAACAT
    GACTGTCAAA ATAATTCCAT CAGTTACTCT CCTCCACGTG AACTCTCTCA AAGACCAATT
    GAGTTCAGCA TCAACAACAA CAGCAGCAGC ATAACATTTG ATCGTTTTTC TAACGGATTC
    TCGCATTCGG CTCCTTCTAC TTCTGCCTCC AAACATAATG CCAAAGACCT AGAAATTGAT
    CGCCTAAAGG AACAAGAATG CTTTGAACTT AAGAAGGAGA GAAGGAAAAG AGACGAACAA
    ATTAAATCTT TATATGCCGA TAGTGAAGAA AAAGATGTGC ATATTCACAG CCGAAAAAAG
    ACAAACTTGG AGCGTGGGGA TCACAGCAAG GATGCTCATG GAATTTCCCA GCACTCTGAA
    AGTGCAAAAC CTTTGGAGGG TCAGATTGAT ATAGCTTCTA CATCCAAGGC CATAGGAGTT
    CAGACAGAGA GAAGCATTGA TTTTACAAAA GTAGAATTGA AGAATGATTC TCCTTCTCAC
    CCTGAACTTT CCGAAACGTT GCTTGGAATC TGGGGCTCCA CAACTGAACA ACAATTGGGA
    AGAAATCTGA TCTCCAAGTT GTTCATGATG TGCCCAACAG ATTTTCAGGT TCTTTTTGGG
    TGCATGAGCA TGAATATGTC TTCCAAAGTA CAAATGGACT GTTTGCAAGA TGAAAGCTCC
    TCTCATGCAG CTTTGCAGTA TCGTATGTGC TCTTTTCCAG CATCTGAAGC AGCAAAAGTT
    TCTCATCTGT ATTCTGTATT GACGAAGATC AATAATGGAG TGCTACAGTT GGAAGCTCTG
    TTTAGATCTT TACTTGATTT TTGTGATGTC ACACATGTTG CCATTCTTTC TAGTTCTTTG
    CATATACTGC TAGCCTTTTT AAAGCAACTA TTGAGTTTGG GAGCAAAATT GGGAGGGGAC
    AATATCAAGA TTGAGGGACT TTGCTCTGGG GACAGCCTTG AAGGCCAGGA TCTGTTTAGT
    ATGATCAGCT ATGAGGCATC AAATGTGGGC TGTAGTTCGC TTGGGATTAA ATCTTTTTAT
    CCAAAACACC TGTGCAAGAA ACGGTGCTGG AATGCTGAGA TTTCCTTGCT GCTTTCTTCT
    GTAAACTGGG TTTTGTTGTT AGAAACGATG CTTCAGATTG CTGTGAGAAA TACAGAAGAA
    TGTGTGAGAC TGGAGGCAGT CTCTATCATG AATGTGATTC TGATGAGTAG TAATGCTCAA
    ACAGAGATGG AAAAGTTTGG TCAATCACCA ATTTTTGAAA GCATAGCACA ATTGCTAAAA
    AGGGAAGCTG GCCTACGTGT GCAAAAGGAA GCTCTCCATC TTCTATTCTT GTTGCTAAAT
    TGTTGTATCC AACTTGATCT GCTCTCCCCA TTTGATTATG ATGTCTATCT TAGCTCCATT
    AGTTTGTTAA CTAGCTTGGT CTCTATTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa02873
    Clone ID Related Accession (Same CDS sequence) XM_006368272.1
    Accession Version XM_006368272.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2196bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). COMPLETENESS: incomplete on the 3' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGAAAGAAG GGGAAGGGGA AGGGTTTGAA GAATGGGACG CTGATTTCTT AGATCAGTTA 
    ATCCAAGTCG AGGAACTTGC TCTCTCTTCT CAACTCCCTT CCTCATCCGA ATCTCCCCTA
    CCTCCCACCA CCACCACCAC CAAACTCCCC TACCTCCCAC CACCGCAACA ACTGCAACAT
    GACTGTCAAA ATAATTCCAT CAGTTACTCT CCTCCACGTG AACTCTCTCA AAGACCAATT
    GAGTTCAGCA TCAACAACAA CAGCAGCAGC ATAACATTTG ATCGTTTTTC TAACGGATTC
    TCGCATTCGG CTCCTTCTAC TTCTGCCTCC AAACATAATG CCAAAGACCT AGAAATTGAT
    CGCCTAAAGG AACAAGAATG CTTTGAACTT AAGAAGGAGA GAAGGAAAAG AGACGAACAA
    ATTAAATCTT TATATGCCGA TAGTGAAGAA AAAGATGTGC ATATTCACAG CCGAAAAAAG
    ACAAACTTGG AGCGTGGGGA TCACAGCAAG GATGCTCATG GAATTTCCCA GCACTCTGAA
    AGTGCAAAAC CTTTGGAGGG TCAGATTGAT ATAGCTTCTA CATCCAAGGC CATAGGAGTT
    CAGACAGAGA GAAGCATTGA TTTTACAAAA GTAGAATTGA AGAATGATTC TCCTTCTCAC
    CCTGAACTTT CCGAAACGTT GCTTGGAATC TGGGGCTCCA CAACTGAACA ACAATTGGGA
    AGAAATCTGA TCTCCAAGTT GTTCATGATG TGCCCAACAG ATTTTCAGGT TCTTTTTGGG
    TGCATGAGCA TGAATATGTC TTCCAAAGTA CAAATGGACT GTTTGCAAGA TGAAAGCTCC
    TCTCATGCAG CTTTGCAGTA TCGTATGTGC TCTTTTCCAG CATCTGAAGC AGCAAAAGTT
    TCTCATCTGT ATTCTGTATT GACGAAGATC AATAATGGAG TGCTACAGTT GGAAGCTCTG
    TTTAGATCTT TACTTGATTT TTGTGATGTC ACACATGTTG CCATTCTTTC TAGTTCTTTG
    CATATACTGC TAGCCTTTTT AAAGCAACTA TTGAGTTTGG GAGCAAAATT GGGAGGAAAA
    CGAAGAGGAA ATGGTTGGAA ATTGTCAGGA ATCAGGTGCA CTCTACTCAG GGACAATATC
    AAGATTGAGG GACTTTGCTC TGGGGACAGC CTTGAAGGCC AGGATCTGTT TAGTATGATC
    AGCTATGAGG CATCAAATGT GGGCTGTAGT TCGCTTGGGA TTAAATCTTT TTATCCAAAA
    CACCTGTGCA AGAAACGGTG CTGGAATGCT GAGATTTCCT TGCTGCTTTC TTCTGTAAAC
    TGGGTTTTGT TGTTAGAAAC GATGCTTCAG ATTGCTGTGA GAAATACAGA AGAATGTGTG
    AGACTGGAGG CAGTCTCTAT CATGAATGTG ATTCTGATGA GTAGTAATGC TCAAACAGAG
    ATGGAAAAGT TTGGTCAATC ACCAATTTTT GAAAGCATAG CACAATTGCT AAAAAGGGAA
    GCTGGCCTAC GTGTGCAAAA GGAAGCTCTC CATCTTCTAT TCTTGTTGCT AAATTGTTCC
    AAGCTGTTGA GCATTTTTTG CTCTGGTTGT AAAGAGGAAG AGATTGCTGA TTCCACAAAT
    AACAAGAAAA ATACTTCAAC ACCCAAAGGA TTCAGTAGCA TCCTTGTGGG CTTGGCAGAA
    TGTATTGCTT GCTCTGGAAA TAGCTTACAG GATATTGAAC TCTGCAAGCG GGCTATCATT
    ATGCTGGCTT TTTTAGCATC GTCTGGAAAA TCTGGCTTTG AAATTATGGT GACTCACAAG
    TTACGTGGAG AGACAAACTT TCTTATGTTG ATTTTGCAAG TGTTAGTGTC TGAAATGAAC
    GTAGAAGCTT CAGCTGAGCC AGCAAGAAGC ATTAAAGCAA GGACATCGCT GATTCGGGAG
    GCACTGATAT TACTTAATAG ACTTGTGTCC AATTCTGGCT ACTCGGCGAT CGTCTTGCGA
    ATATTAACAG CTAGAAGAGA TATGGCTACT TTGACCATTG ATATTGCAAG CAGGTTGTCC
    CAAGAAGACC AGAGTCTGAG GCTTTCTGAT GTCAATGGAC AGGTGAAAGA ATCAGAAATT
    GTTGAGTTAG GTCAAGCATT TAAGAAAAGG GTTTTTGCTT ATTTAGGAGA TAAAATATCA
    TTAAAAAAAC CCGATATCAT GGTTCAAATA AACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006368334.1
    CDS20..2215
    Translation

    Target ORF information:

    RefSeq Version XM_006368272.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s01720g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006368272.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGAAAGAAG GGGAAGGGGA AGGGTTTGAA GAATGGGACG CTGATTTCTT AGATCAGTTA 
    ATCCAAGTCG AGGAACTTGC TCTCTCTTCT CAACTCCCTT CCTCATCCGA ATCTCCCCTA
    CCTCCCACCA CCACCACCAC CAAACTCCCC TACCTCCCAC CACCGCAACA ACTGCAACAT
    GACTGTCAAA ATAATTCCAT CAGTTACTCT CCTCCACGTG AACTCTCTCA AAGACCAATT
    GAGTTCAGCA TCAACAACAA CAGCAGCAGC ATAACATTTG ATCGTTTTTC TAACGGATTC
    TCGCATTCGG CTCCTTCTAC TTCTGCCTCC AAACATAATG CCAAAGACCT AGAAATTGAT
    CGCCTAAAGG AACAAGAATG CTTTGAACTT AAGAAGGAGA GAAGGAAAAG AGACGAACAA
    ATTAAATCTT TATATGCCGA TAGTGAAGAA AAAGATGTGC ATATTCACAG CCGAAAAAAG
    ACAAACTTGG AGCGTGGGGA TCACAGCAAG GATGCTCATG GAATTTCCCA GCACTCTGAA
    AGTGCAAAAC CTTTGGAGGG TCAGATTGAT ATAGCTTCTA CATCCAAGGC CATAGGAGTT
    CAGACAGAGA GAAGCATTGA TTTTACAAAA GTAGAATTGA AGAATGATTC TCCTTCTCAC
    CCTGAACTTT CCGAAACGTT GCTTGGAATC TGGGGCTCCA CAACTGAACA ACAATTGGGA
    AGAAATCTGA TCTCCAAGTT GTTCATGATG TGCCCAACAG ATTTTCAGGT TCTTTTTGGG
    TGCATGAGCA TGAATATGTC TTCCAAAGTA CAAATGGACT GTTTGCAAGA TGAAAGCTCC
    TCTCATGCAG CTTTGCAGTA TCGTATGTGC TCTTTTCCAG CATCTGAAGC AGCAAAAGTT
    TCTCATCTGT ATTCTGTATT GACGAAGATC AATAATGGAG TGCTACAGTT GGAAGCTCTG
    TTTAGATCTT TACTTGATTT TTGTGATGTC ACACATGTTG CCATTCTTTC TAGTTCTTTG
    CATATACTGC TAGCCTTTTT AAAGCAACTA TTGAGTTTGG GAGCAAAATT GGGAGGAAAA
    CGAAGAGGAA ATGGTTGGAA ATTGTCAGGA ATCAGGTGCA CTCTACTCAG GGACAATATC
    AAGATTGAGG GACTTTGCTC TGGGGACAGC CTTGAAGGCC AGGATCTGTT TAGTATGATC
    AGCTATGAGG CATCAAATGT GGGCTGTAGT TCGCTTGGGA TTAAATCTTT TTATCCAAAA
    CACCTGTGCA AGAAACGGTG CTGGAATGCT GAGATTTCCT TGCTGCTTTC TTCTGTAAAC
    TGGGTTTTGT TGTTAGAAAC GATGCTTCAG ATTGCTGTGA GAAATACAGA AGAATGTGTG
    AGACTGGAGG CAGTCTCTAT CATGAATGTG ATTCTGATGA GTAGTAATGC TCAAACAGAG
    ATGGAAAAGT TTGGTCAATC ACCAATTTTT GAAAGCATAG CACAATTGCT AAAAAGGGAA
    GCTGGCCTAC GTGTGCAAAA GGAAGCTCTC CATCTTCTAT TCTTGTTGCT AAATTGTTCC
    AAGCTGTTGA GCATTTTTTG CTCTGGTTGT AAAGAGGAAG AGATTGCTGA TTCCACAAAT
    AACAAGAAAA ATACTTCAAC ACCCAAAGGA TTCAGTAGCA TCCTTGTGGG CTTGGCAGAA
    TGTATTGCTT GCTCTGGAAA TAGCTTACAG GATATTGAAC TCTGCAAGCG GGCTATCATT
    ATGCTGGCTT TTTTAGCATC GTCTGGAAAA TCTGGCTTTG AAATTATGGT GACTCACAAG
    TTACGTGGAG AGACAAACTT TCTTATGTTG ATTTTGCAAG TGTTAGTGTC TGAAATGAAC
    GTAGAAGCTT CAGCTGAGCC AGCAAGAAGC ATTAAAGCAA GGACATCGCT GATTCGGGAG
    GCACTGATAT TACTTAATAG ACTTGTGTCC AATTCTGGCT ACTCGGCGAT CGTCTTGCGA
    ATATTAACAG CTAGAAGAGA TATGGCTACT TTGACCATTG ATATTGCAAG CAGGTTGTCC
    CAAGAAGACC AGAGTCTGAG GCTTTCTGAT GTCAATGGAC AGGTGAAAGA ATCAGAAATT
    GTTGAGTTAG GTCAAGCATT TAAGAAAAGG GTTTTTGCTT ATTTAGGAGA TAAAATATCA
    TTAAAAAAAC CCGATATCAT GGTTCAAATA AACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa420894
    Clone ID Related Accession (Same CDS sequence) XM_024600726.1
    Accession Version XM_024600726.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2184bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product uncharacterized protein LOC18094104
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGAAAGAAG GGGAAGGGGA AGGGTTTGAA GAATGGGACG CTGATTTCTT AGACCAGTTA 
    ATCCAAGTCG AGGAACTCGC TCTCTCTTCT CAACTCCCTT CCTCCTCCGA ATCTCCCCTA
    CCTCCCACCA CCACCACCAA ACTCCCCTAC CTCCCACCAC CGCAACAACT GCAACATGAC
    TATCAAAATA ATTCCATCAG TTACTCTCCT CCGCGTGAAC TCTCTCAAAG ACCAATTGAG
    TTCAGCATCA ACAACAACAG CAGCAGCATA ACATTTGATC GTTTTTCTAA CGGATTCTCG
    CATTCGGCTC CTTCTACTTC TGCCTCCAAA CATAATGCCA AAGACCTAGA AATTGATCGC
    CTAAAGAGAG AATTGGGACG CGCATCAAAG CACCTTACCG ATTTGGAACA AGAATGCTTT
    GAACTTAAGA AGGAGAGAAG GAAAAGAGAC GAACAAATTA AATCTTTATA TGCCGATAGT
    GAAGAAAAAG ATGTGCATAT TCACAGCCGA AAAAAGACAA ACTTTGGCAG GGAGCGTGGG
    GATCACAGCA AGGATGCTCA TGGAATTTCC CAGCACTCTG AAAGTGCAAA ACCTTTGGAG
    GGTCAGATTG ATATAGCTTC TACATCCAAG GCCATAGGAG TTCAGACAGA GAGAAGCATT
    GATTTTACCA AAGTAGAATT GAAGAATGAT TCACCTTCTC ACCCTGAACT TTCCGAAACG
    TTGCTTGGAA TCTGGGGCTC CACAACTGAA CAACAATTGG GAAGAAATCT GATCTCCAAG
    TTGTTCATGA TGTGCCCAAC AGATTTTCAG GTTCTTTTTG GGTGCATGAG CATGAATAAG
    TCTTCCAAAG TACAAATGGA CTATTTGCAA GACGAAAGCT CCTCTCATGC AGCTTTGCAG
    TATCATATGT GCTCTTTTCC AGCATCTGAA GCAGCAAAAG TTTCTCATCT GTATTCTGTA
    TTGACGAAGA TCAATAATGG AGTGCTACAG TTGGAAGCTC TGTTTAGATC TTTACTTGAT
    TTTTGTGATG TCACACATGT TGCCATTCTT TCTAGTTCTT TGCATATACT GCTAGCCTTT
    TTAAAGCAAC TATTGAGTTT GGGAGCAAAA TTGGGAGGGG ACAATATCAA GATTGAGGGA
    CTTTGCTCTG GGGACAGCCT TGAAGGCCAG GATCTGTTTA GTATGATCAG CTATGAGGCA
    TCAAATGTGG GCTGTAGTTC GCTTGGGATT AAATCTTTTT ATCCAAAACA CCTGTGCAAG
    AAACGGTGCT GGAATGCTGA GATTTCCTTG CTGCTTTCTT CTGTAAACTG GGTTTTGTTG
    TTAGAAACGA TGCTTCAGAT TGCTGTGAGA AATACAGAAG AATGTGTGAG ACTGGAGGCA
    GTCTCTATCA TGAATGTGAT TCTGATGAGT AGTAATGCTC AAACAGAGAT GGAAAAGTTT
    GGTCAATCAC CAATTTTTGA AAGCATAGCA CAATTGCTAA AAAGGGAAGC TGGCCTACGT
    GTGCAAAAGG AAGCTCTCCA TCTTCTATTC TTGTTGCTAA ATTGTTCCAA GCTGTTGAGC
    ATTTTTTGCT CTGGTTGTAA AGAGGAAGAG ATTGCTGATT CCACAAATAA CAAGAAAAAT
    ACTTCAACAC CCAAAGGATT CAGTAGCATC CTTGTGGGCT TGGCAGAATG TATTGCTTGC
    TCTGGAAATA GCTTACAGGA TATTGAACTC TGCAAGCGGG CTATCATTAT GCTGGCTTTT
    TTAGCATCGT CTGGAAAATC TGGCTTTGAA ATTATGGTGA CTCACAAGTT ACGTGGAGAG
    ACAAACTTTC TTATGTTGAT TTTGCAAGTG TTAGTGTCTG AAATGAACGT AGAAGCTTCA
    GCTGAGCCAG CAAGAAGCAT TAAAGCAAGG ACATCGCTGA TTCGGGAGGC ACTGATATTA
    CTTAATAGAC TTGTGTCCAA TTCTGGCTAC TCGGCGATCG TCTTGCGAAT ATTAACAGCT
    AGAAGAGATA TGGCTACTTT GACCATTGAT ATTGCAAGCA GGTTGTCCCA AGAAGACCAG
    AGTCTGAGGC TTTCTGATGT CAATGGACAG GTGAAAGAAT CAGAAATTGT TGAGTTAGGT
    CAAGCATTTA AGAAAAGGGT TTTTGCTTAT TTAGGAGATA AAATATCATT AAAAAAACCC
    GATATCATGG TTCAAATAAA CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024456494.1
    CDS50..2233
    Translation

    Target ORF information:

    RefSeq Version XM_024600726.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uncharacterized LOC18094104 (LOC18094104), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024600726.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGAAAGAAG GGGAAGGGGA AGGGTTTGAA GAATGGGACG CTGATTTCTT AGACCAGTTA 
    ATCCAAGTCG AGGAACTCGC TCTCTCTTCT CAACTCCCTT CCTCCTCCGA ATCTCCCCTA
    CCTCCCACCA CCACCACCAA ACTCCCCTAC CTCCCACCAC CGCAACAACT GCAACATGAC
    TATCAAAATA ATTCCATCAG TTACTCTCCT CCGCGTGAAC TCTCTCAAAG ACCAATTGAG
    TTCAGCATCA ACAACAACAG CAGCAGCATA ACATTTGATC GTTTTTCTAA CGGATTCTCG
    CATTCGGCTC CTTCTACTTC TGCCTCCAAA CATAATGCCA AAGACCTAGA AATTGATCGC
    CTAAAGAGAG AATTGGGACG CGCATCAAAG CACCTTACCG ATTTGGAACA AGAATGCTTT
    GAACTTAAGA AGGAGAGAAG GAAAAGAGAC GAACAAATTA AATCTTTATA TGCCGATAGT
    GAAGAAAAAG ATGTGCATAT TCACAGCCGA AAAAAGACAA ACTTTGGCAG GGAGCGTGGG
    GATCACAGCA AGGATGCTCA TGGAATTTCC CAGCACTCTG AAAGTGCAAA ACCTTTGGAG
    GGTCAGATTG ATATAGCTTC TACATCCAAG GCCATAGGAG TTCAGACAGA GAGAAGCATT
    GATTTTACCA AAGTAGAATT GAAGAATGAT TCACCTTCTC ACCCTGAACT TTCCGAAACG
    TTGCTTGGAA TCTGGGGCTC CACAACTGAA CAACAATTGG GAAGAAATCT GATCTCCAAG
    TTGTTCATGA TGTGCCCAAC AGATTTTCAG GTTCTTTTTG GGTGCATGAG CATGAATAAG
    TCTTCCAAAG TACAAATGGA CTATTTGCAA GACGAAAGCT CCTCTCATGC AGCTTTGCAG
    TATCATATGT GCTCTTTTCC AGCATCTGAA GCAGCAAAAG TTTCTCATCT GTATTCTGTA
    TTGACGAAGA TCAATAATGG AGTGCTACAG TTGGAAGCTC TGTTTAGATC TTTACTTGAT
    TTTTGTGATG TCACACATGT TGCCATTCTT TCTAGTTCTT TGCATATACT GCTAGCCTTT
    TTAAAGCAAC TATTGAGTTT GGGAGCAAAA TTGGGAGGGG ACAATATCAA GATTGAGGGA
    CTTTGCTCTG GGGACAGCCT TGAAGGCCAG GATCTGTTTA GTATGATCAG CTATGAGGCA
    TCAAATGTGG GCTGTAGTTC GCTTGGGATT AAATCTTTTT ATCCAAAACA CCTGTGCAAG
    AAACGGTGCT GGAATGCTGA GATTTCCTTG CTGCTTTCTT CTGTAAACTG GGTTTTGTTG
    TTAGAAACGA TGCTTCAGAT TGCTGTGAGA AATACAGAAG AATGTGTGAG ACTGGAGGCA
    GTCTCTATCA TGAATGTGAT TCTGATGAGT AGTAATGCTC AAACAGAGAT GGAAAAGTTT
    GGTCAATCAC CAATTTTTGA AAGCATAGCA CAATTGCTAA AAAGGGAAGC TGGCCTACGT
    GTGCAAAAGG AAGCTCTCCA TCTTCTATTC TTGTTGCTAA ATTGTTCCAA GCTGTTGAGC
    ATTTTTTGCT CTGGTTGTAA AGAGGAAGAG ATTGCTGATT CCACAAATAA CAAGAAAAAT
    ACTTCAACAC CCAAAGGATT CAGTAGCATC CTTGTGGGCT TGGCAGAATG TATTGCTTGC
    TCTGGAAATA GCTTACAGGA TATTGAACTC TGCAAGCGGG CTATCATTAT GCTGGCTTTT
    TTAGCATCGT CTGGAAAATC TGGCTTTGAA ATTATGGTGA CTCACAAGTT ACGTGGAGAG
    ACAAACTTTC TTATGTTGAT TTTGCAAGTG TTAGTGTCTG AAATGAACGT AGAAGCTTCA
    GCTGAGCCAG CAAGAAGCAT TAAAGCAAGG ACATCGCTGA TTCGGGAGGC ACTGATATTA
    CTTAATAGAC TTGTGTCCAA TTCTGGCTAC TCGGCGATCG TCTTGCGAAT ATTAACAGCT
    AGAAGAGATA TGGCTACTTT GACCATTGAT ATTGCAAGCA GGTTGTCCCA AGAAGACCAG
    AGTCTGAGGC TTTCTGATGT CAATGGACAG GTGAAAGAAT CAGAAATTGT TGAGTTAGGT
    CAAGCATTTA AGAAAAGGGT TTTTGCTTAT TTAGGAGATA AAATATCATT AAAAAAACCC
    GATATCATGG TTCAAATAAA CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
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