atl1 cDNA ORF clone, Notothenia coriiceps(black rockcod)

Gene
Clones
gRNAs

Summary

Gene Symbol	atl1
Entrez Gene ID	104954142
Full Name	atlastin GTPase 1
Gene Type	protein-coding
Organism	Notothenia coriiceps(black rockcod)

mRNA and Protein(s)

mRNA	Protein	Name
XM_010781216.1	XP_010779518.1	atlastin-1

Pathways from BioSystems
Gene Ontology

The following atl1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the atl1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ONo46069	XM_010781216.1 Latest version!	Notothenia coriiceps atlastin GTPase 1 (atl1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

atl1 ( XM_010781216.1 ) cDNA ORF clone, Notothenia coriiceps(black rockcod) -> XP_010779518.1 Notothenia coriiceps atlastin GTPase 1 (atl1), mRNA.

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CloneID	ONo46069
Clone ID Related Accession (Same CDS sequence)	XM_010781216.1
Accession Version	XM_010781216.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1614bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-12-22
Organism	Notothenia coriiceps(black rockcod)
Product	atlastin-1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011355580.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Notothenia coriiceps Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 3% of CDS bases ##RefSeq-Attributes-END##

ATGGCTAAAC ACCGCAAAGA GAGAGACAGC TGGGGGTCCC TGAGCGACAA GCCGGTGTAC 
GACTGGAGCT CGGAGGAGGA GGAGCCTGAC GGACGGGCGC GGCCGATTCA AGTCCTGCTG 
GTGAAGGACG ACCACACCTT CGAGCTGGAC GAGGCAGCGC TGAGCCGGAT CCTGCTGAGC 
GCCGAGGTCC GGGACCGAGA AGTGGTCGCC ATCTCTGTGG CCGGAGCCTT CCGGAAGGGC 
AAGTCCTTCC TCATGGACTT CATGCTGCGC TACATGTACA ACCACGCGTC TGAGGGCTGG 
CTGGGCGTTG CAGACGAGCC TCTGACCGGC TTCTCCTGGA GGGGGGGGTC CGAGAGAGAG 
ACCACCGGGA TCCAGATCTG GAGCGAAGTC TTCCTGGTGG ACAAACCCGA CGGCACCAAG 
GTGGCTGTTT TGCTGATGGA CACTCAGGGA ACGTTTGACA GCCAGTCGAC TCTGAGAGAC 
TCGGCCACCG TGTTCGCTCT GAGCACCATG ATCAGCTCCA TGCAGGTTTA CAACATCTCA 
CAGAATGTAC AAGAAGACGA CCTTCAGCAC CTGCAGCTCT TCACTGAGTA CGGCAGACTA 
GCCATGGAGG AGACGTTCCT CAAGCCCTTT CAGTCTATGA TCTTCCTGGT TCGAGACTGG 
AGCTTTCCCT ACGAGTTTCC CTACGGACAG GAGGGAGGCA TGAATTTCCT GGAGAAGAGA 
CTGAAGATCT CAGAGAACCA GCACGAGGAG CTGCAGAACG TCCGTAAACA CATCCACTCC 
TGCTTCACCA ACATCTCCTG CTTCCTGATG CCCCACCCCG GACTCAAGGT CGCCACCAAC 
CCCAACTTCG ACGGCAGGAT TAAAGAGATT GATGGCGAGT TCATCAACAA CCTGAAGGTC 
TTGGTGCCGT GGCTGCTCAG TCCTGAGAAC ATCGACGTGA AGGAGATCAA CGGCAGCAAG 
ATCACCTGCA GAGGCCTGCT GGAGTACTTC AAGGCGTACA TTAAAATTTA CCAGGGTGAG 
GAGCTGCCCC ATCCAAAGTC CATGCTGCAG GCCACAGCAG AGGCGAATAA TCTGGCTGCA 
GTCGCTGCTG CAAAGGATCT GTACAGCAAG AAGATGGAGC AGGTGTGTGG GGGGGACCGG 
CCCTTCCTGG CCCCCAGCGA GCTGCAGGCG CGGCACGGGG CCATCAGGGA GGAGGCGCTG 
CAGGTGTTCA AGGGCGTGAA GAAGATGGGC GGCGAGGAGT TCAGCCGGCG CTACCTGCAG 
CAGCTGGAGG CCGAGGTGGA CGAGGTGTTC GTCCAGTACA TCAAGCACAA CGACTCCAAG 
AACATTTTCC ACGCCGCACG CACCCCCGCC ACCCTCTTCG TGGTCATCTT CGTCATGTAC 
GTGGCCGCCG GCATCACGGG CTTCGTGGGC GTGGACGTGA TCGCCAGCCT GTGCAACATG 
GTGCTGGGCC TGGCGCTCAT CACGCTCTGC ACCTGGGCCT ACATCCGATA CTCTGGGGAG 
TACAGAGAGC TGGGGGCCGT CATCGACCAG GTGGCCGGGG CCCTGTGGGA CCAGGAGCTT 
CATCGGACGG TTACAAAAGG TGAAAAGAGA GACCGAGTAA GGGGAATGGC GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_010779518.1
CDS	226..1839
Translation	MAKHRKERDSWGSLSDKPVYDWSSEEEEPDGRARPIQVLLVKDDHTFELDEAALSRILLSAEVRDREVVAISVAGAFRKGKSFLMDFMLRYMYNHASEGWLGVADEPLTGFSWRGGSERETTGIQIWSEVFLVDKPDGTKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNISQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFPYGQEGGMNFLEKRLKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPNFDGRIKEIDGEFINNLKVLVPWLLSPENIDVKEINGSKITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAAAKDLYSKKMEQVCGGDRPFLAPSELQARHGAIREEALQVFKGVKKMGGEEFSRRYLQQLEAEVDEVFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDVIASLCNMVLGLALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQELHRTVTKGEKRDRVRGMA

Target ORF information:

RefSeq Version	XM_010781216.1
Organism	Notothenia coriiceps(black rockcod)
Definition	Notothenia coriiceps atlastin GTPase 1 (atl1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_010781216.1

ORF Insert Sequence:

ATGGCTAAAC ACCGCAAAGA GAGAGACAGC TGGGGGTCCC TGAGCGACAA GCCGGTGTAC 
GACTGGAGCT CGGAGGAGGA GGAGCCTGAC GGACGGGCGC GGCCGATTCA AGTCCTGCTG 
GTGAAGGACG ACCACACCTT CGAGCTGGAC GAGGCAGCGC TGAGCCGGAT CCTGCTGAGC 
GCCGAGGTCC GGGACCGAGA AGTGGTCGCC ATCTCTGTGG CCGGAGCCTT CCGGAAGGGC 
AAGTCCTTCC TCATGGACTT CATGCTGCGC TACATGTACA ACCACGCGTC TGAGGGCTGG 
CTGGGCGTTG CAGACGAGCC TCTGACCGGC TTCTCCTGGA GGGGGGGGTC CGAGAGAGAG 
ACCACCGGGA TCCAGATCTG GAGCGAAGTC TTCCTGGTGG ACAAACCCGA CGGCACCAAG 
GTGGCTGTTT TGCTGATGGA CACTCAGGGA ACGTTTGACA GCCAGTCGAC TCTGAGAGAC 
TCGGCCACCG TGTTCGCTCT GAGCACCATG ATCAGCTCCA TGCAGGTTTA CAACATCTCA 
CAGAATGTAC AAGAAGACGA CCTTCAGCAC CTGCAGCTCT TCACTGAGTA CGGCAGACTA 
GCCATGGAGG AGACGTTCCT CAAGCCCTTT CAGTCTATGA TCTTCCTGGT TCGAGACTGG 
AGCTTTCCCT ACGAGTTTCC CTACGGACAG GAGGGAGGCA TGAATTTCCT GGAGAAGAGA 
CTGAAGATCT CAGAGAACCA GCACGAGGAG CTGCAGAACG TCCGTAAACA CATCCACTCC 
TGCTTCACCA ACATCTCCTG CTTCCTGATG CCCCACCCCG GACTCAAGGT CGCCACCAAC 
CCCAACTTCG ACGGCAGGAT TAAAGAGATT GATGGCGAGT TCATCAACAA CCTGAAGGTC 
TTGGTGCCGT GGCTGCTCAG TCCTGAGAAC ATCGACGTGA AGGAGATCAA CGGCAGCAAG 
ATCACCTGCA GAGGCCTGCT GGAGTACTTC AAGGCGTACA TTAAAATTTA CCAGGGTGAG 
GAGCTGCCCC ATCCAAAGTC CATGCTGCAG GCCACAGCAG AGGCGAATAA TCTGGCTGCA 
GTCGCTGCTG CAAAGGATCT GTACAGCAAG AAGATGGAGC AGGTGTGTGG GGGGGACCGG 
CCCTTCCTGG CCCCCAGCGA GCTGCAGGCG CGGCACGGGG CCATCAGGGA GGAGGCGCTG 
CAGGTGTTCA AGGGCGTGAA GAAGATGGGC GGCGAGGAGT TCAGCCGGCG CTACCTGCAG 
CAGCTGGAGG CCGAGGTGGA CGAGGTGTTC GTCCAGTACA TCAAGCACAA CGACTCCAAG 
AACATTTTCC ACGCCGCACG CACCCCCGCC ACCCTCTTCG TGGTCATCTT CGTCATGTAC 
GTGGCCGCCG GCATCACGGG CTTCGTGGGC GTGGACGTGA TCGCCAGCCT GTGCAACATG 
GTGCTGGGCC TGGCGCTCAT CACGCTCTGC ACCTGGGCCT ACATCCGATA CTCTGGGGAG 
TACAGAGAGC TGGGGGCCGT CATCGACCAG GTGGCCGGGG CCCTGTGGGA CCAGGAGCTT 
CATCGGACGG TTACAAAAGG TGAAAAGAGA GACCGAGTAA GGGGAATGGC GTGA